RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 TBC1D9BQ66K14 1250 aa25.07■■□□□ 1.6
HDAC4-212ENST00000495497 COPS6Q7L5N1 327 aa25.07■■□□□ 1.6
HDAC4-212ENST00000495497 DDR1Q08345 913 aa25.06■■□□□ 1.6
HDAC4-212ENST00000495497 NFIXQ14938 502 aa25.06■■□□□ 1.6
HDAC4-212ENST00000495497 CCDC30Q5VVM6 783 aa25.06■■□□□ 1.6
HDAC4-212ENST00000495497 KIF6Q6ZMV9 814 aa25.06■■□□□ 1.6
HDAC4-212ENST00000495497 KLHL34Q8N239 644 aa25.06■■□□□ 1.6
HDAC4-212ENST00000495497 ZBTB3Q9H5J0 574 aa25.06■■□□□ 1.6
HDAC4-212ENST00000495497 TRMT2AQ8IZ69 625 aaKnown RBP25.04■■□□□ 1.6
HDAC4-212ENST00000495497 FHDC1Q9C0D6 1143 aaPredicted RBP25.04■■□□□ 1.6
HDAC4-212ENST00000495497 PHAXQ9H814 394 aaKnown RBP25.04■■□□□ 1.6
HDAC4-212ENST00000495497 PARP3Q9Y6F1 533 aa25.04■■□□□ 1.6
HDAC4-212ENST00000495497 MAP3K15Q6ZN16 1313 aa25.04■■□□□ 1.6
HDAC4-212ENST00000495497 POLRMTO00411 1230 aaKnown RBP25.03■■□□□ 1.6
HDAC4-212ENST00000495497 HYPKQ9NX55 129 aa25.03■■□□□ 1.6
HDAC4-212ENST00000495497 SCN7AQ01118 1682 aa25.03■■□□□ 1.6
HDAC4-212ENST00000495497 ERVV-1B6SEH8 477 aa25.01■■□□□ 1.59
HDAC4-212ENST00000495497 CLEC4GQ6UXB4 293 aa25.01■■□□□ 1.59
HDAC4-212ENST00000495497 ZNF652Q9Y2D9 606 aa25.01■■□□□ 1.59
HDAC4-212ENST00000495497 BCORQ6W2J9 1755 aa25■■□□□ 1.59
HDAC4-212ENST00000495497 STK31Q9BXU1 1019 aa25■■□□□ 1.59
HDAC4-212ENST00000495497 CHMP4AQ9BY43 222 aa25■■□□□ 1.59
HDAC4-212ENST00000495497 SLC4A2P04920 1241 aa24.99■■□□□ 1.59
HDAC4-212ENST00000495497 SERPINB2P05120 415 aa24.99■■□□□ 1.59
HDAC4-212ENST00000495497 ZBED9Q6R2W3 1325 aa24.98■■□□□ 1.59
HDAC4-212ENST00000495497 G2E3Q7L622 706 aa24.98■■□□□ 1.59
HDAC4-212ENST00000495497 SETDB2Q96T68 719 aa24.98■■□□□ 1.59
HDAC4-212ENST00000495497 SYT17Q9BSW7 474 aa24.98■■□□□ 1.59
HDAC4-212ENST00000495497 NIP7Q9Y221 180 aaKnown RBP eCLIP24.98■■□□□ 1.59
HDAC4-212ENST00000495497 GIGYF2Q6Y7W6 1299 aaKnown RBP24.97■■□□□ 1.59
HDAC4-212ENST00000495497 FAM177BA6PVY3 158 aa24.96■■□□□ 1.59
HDAC4-212ENST00000495497 GPTP24298 496 aa24.96■■□□□ 1.59
HDAC4-212ENST00000495497 ANKRD13DQ6ZTN6 518 aa24.96■■□□□ 1.59
HDAC4-212ENST00000495497 NLGN2Q8NFZ4 835 aa24.96■■□□□ 1.59
HDAC4-212ENST00000495497 RGL2O15211 777 aa24.95■■□□□ 1.58
HDAC4-212ENST00000495497 CCDC24Q8N4L8 307 aa24.95■■□□□ 1.58
HDAC4-212ENST00000495497 PLBD2Q8NHP8 589 aa24.94■■□□□ 1.58
HDAC4-212ENST00000495497 CARMIL3Q8ND23 1372 aa24.93■■□□□ 1.58
HDAC4-212ENST00000495497 ZNF34Q8IZ26 560 aa24.93■■□□□ 1.58
HDAC4-212ENST00000495497 UBN2Q6ZU65 1347 aa24.92■■□□□ 1.58
HDAC4-212ENST00000495497 RIC3Q7Z5B4 369 aa24.92■■□□□ 1.58
HDAC4-212ENST00000495497 ZNF428Q96B54 188 aa24.92■■□□□ 1.58
HDAC4-212ENST00000495497 CD2APQ9Y5K6 639 aa24.92■■□□□ 1.58
HDAC4-212ENST00000495497 PRR5LQ6MZQ0 368 aa24.91■■□□□ 1.58
HDAC4-212ENST00000495497 NBPF5PQ86XG9 351 aaPredicted RBP24.91■■□□□ 1.58
HDAC4-212ENST00000495497 C10orf71Q711Q0 1435 aa24.91■■□□□ 1.58
HDAC4-212ENST00000495497 ATP10DQ9P241 1426 aa24.91■■□□□ 1.58
HDAC4-212ENST00000495497 FLIIQ13045 1269 aa24.9■■□□□ 1.58
HDAC4-212ENST00000495497 TCIRG1Q13488 830 aa24.9■■□□□ 1.58
HDAC4-212ENST00000495497 NUP98P52948 1817 aa24.9■■□□□ 1.58
HDAC4-212ENST00000495497 SUSD4Q5VX71 490 aa24.89■■□□□ 1.58
HDAC4-212ENST00000495497 SSH1Q8WYL5 1049 aa24.89■■□□□ 1.58
HDAC4-212ENST00000495497 BCL2L13Q9BXK5 485 aa24.89■■□□□ 1.58
HDAC4-212ENST00000495497 PI4KAP2A4QPH2 592 aa24.88■■□□□ 1.57
HDAC4-212ENST00000495497 ATP5J2-PTCD1G3V325 749 aa24.88■■□□□ 1.57
HDAC4-212ENST00000495497 NPHP1O15259 732 aa24.88■■□□□ 1.57
HDAC4-212ENST00000495497 DDX58O95786 925 aaKnown RBP24.88■■□□□ 1.57
HDAC4-212ENST00000495497 HSP90AB3PQ58FF7 597 aa24.88■■□□□ 1.57
HDAC4-212ENST00000495497 MRPL50Q8N5N7 158 aaKnown RBP24.88■■□□□ 1.57
HDAC4-212ENST00000495497 PI4KAP1Q8N8J0 262 aa24.88■■□□□ 1.57
HDAC4-212ENST00000495497 CNBD1Q8NA66 436 aa24.88■■□□□ 1.57
HDAC4-212ENST00000495497 YTHDC1Q96MU7 727 aaKnown RBP24.88■■□□□ 1.57
HDAC4-212ENST00000495497 MAP3K2Q9Y2U5 619 aa24.88■■□□□ 1.57
HDAC4-212ENST00000495497 AFDNP55196 1824 aaKnown RBP24.88■■□□□ 1.57
HDAC4-212ENST00000495497 KSR2Q6VAB6 950 aa24.87■■□□□ 1.57
HDAC4-212ENST00000495497 MYD88Q99836 296 aa24.87■■□□□ 1.57
HDAC4-212ENST00000495497 ADCY9O60503 1353 aa24.87■■□□□ 1.57
HDAC4-212ENST00000495497 NRXN2Q9P2S2 1712 aa24.86■■□□□ 1.57
HDAC4-212ENST00000495497 A0A0G2JLW4 131 aa24.86■■□□□ 1.57
HDAC4-212ENST00000495497 FKBP5Q13451 457 aaPredicted RBP24.86■■□□□ 1.57
HDAC4-212ENST00000495497 NUTM1Q86Y26 1132 aa24.86■■□□□ 1.57
HDAC4-212ENST00000495497 WWC3Q9ULE0 1092 aa24.86■■□□□ 1.57
HDAC4-212ENST00000495497 TPTE2Q6XPS3 522 aa24.85■■□□□ 1.57
HDAC4-212ENST00000495497 NLRP10Q86W26 655 aa24.85■■□□□ 1.57
HDAC4-212ENST00000495497 ISCA1Q9BUE6 129 aa24.85■■□□□ 1.57
HDAC4-212ENST00000495497 CT47B1P0C2W7 299 aaPredicted RBP24.84■■□□□ 1.57
HDAC4-212ENST00000495497 DPEP1P16444 411 aa24.84■■□□□ 1.57
HDAC4-212ENST00000495497 ST5P78524 1137 aa24.84■■□□□ 1.57
HDAC4-212ENST00000495497 PARP10Q53GL7 1025 aa24.84■■□□□ 1.57
HDAC4-212ENST00000495497 METTL22Q9BUU2 404 aaPredicted RBP24.84■■□□□ 1.57
HDAC4-212ENST00000495497 NTSR2O95665 410 aa24.83■■□□□ 1.57
HDAC4-212ENST00000495497 GTF2E1P29083 439 aaPredicted RBP24.83■■□□□ 1.57
HDAC4-212ENST00000495497 CHRNA5P30532 468 aa24.83■■□□□ 1.57
HDAC4-212ENST00000495497 TGFB2P61812 414 aa24.83■■□□□ 1.57
HDAC4-212ENST00000495497 ERFEQ4G0M1 354 aa24.83■■□□□ 1.57
HDAC4-212ENST00000495497 PXDNLA1KZ92 1463 aa24.83■■□□□ 1.56
HDAC4-212ENST00000495497 F6X3S4 739 aa24.82■■□□□ 1.56
HDAC4-212ENST00000495497 ALDH1L2Q3SY69 923 aa24.82■■□□□ 1.56
HDAC4-212ENST00000495497 PPP1R42Q7Z4L9 355 aa24.82■■□□□ 1.56
HDAC4-212ENST00000495497 UTP14AQ9BVJ6 771 aaKnown RBP24.82■■□□□ 1.56
HDAC4-212ENST00000495497 NYXQ9GZU5 481 aa24.82■■□□□ 1.56
HDAC4-212ENST00000495497 SMC4Q9NTJ3 1288 aa24.82■■□□□ 1.56
HDAC4-212ENST00000495497 ARFGEF2Q9Y6D5 1785 aa24.82■■□□□ 1.56
HDAC4-212ENST00000495497 RARSP54136 660 aaKnown RBP24.81■■□□□ 1.56
HDAC4-212ENST00000495497 SYNE4Q8N205 404 aa24.81■■□□□ 1.56
HDAC4-212ENST00000495497 BRIP1Q9BX63 1249 aa24.81■■□□□ 1.56
HDAC4-212ENST00000495497 ABCC12Q96J65 1359 aa24.8■■□□□ 1.56
HDAC4-212ENST00000495497 KIF13BQ9NQT8 1826 aa24.8■■□□□ 1.56
HDAC4-212ENST00000495497 KCNA3P22001 575 aa24.8■■□□□ 1.56
HDAC4-212ENST00000495497 PELP1Q8IZL8 1130 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms