RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 APAF1O14727 1248 aa17.43■□□□□ 0.38
RBM28-208ENST00000495327 PDZRN3Q9UPQ7 1066 aa17.43■□□□□ 0.38
RBM28-208ENST00000495327 DALRD3Q5D0E6 543 aaKnown RBP17.42■□□□□ 0.38
RBM28-208ENST00000495327 CNBD1Q8NA66 436 aa17.42■□□□□ 0.38
RBM28-208ENST00000495327 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
RBM28-208ENST00000495327 MAP3K15Q6ZN16 1313 aa17.42■□□□□ 0.38
RBM28-208ENST00000495327 ERVV-1B6SEH8 477 aa17.41■□□□□ 0.38
RBM28-208ENST00000495327 LRP10Q7Z4F1 713 aa17.41■□□□□ 0.38
RBM28-208ENST00000495327 BRIP1Q9BX63 1249 aa17.41■□□□□ 0.38
RBM28-208ENST00000495327 TNRC6CQ9HCJ0 1690 aaKnown RBP17.41■□□□□ 0.38
RBM28-208ENST00000495327 HOXB7P09629 217 aa17.4■□□□□ 0.38
RBM28-208ENST00000495327 MYL6BP14649 208 aa17.4■□□□□ 0.38
RBM28-208ENST00000495327 PDE6BP35913 854 aa17.4■□□□□ 0.38
RBM28-208ENST00000495327 ST5P78524 1137 aa17.4■□□□□ 0.38
RBM28-208ENST00000495327 CALD1Q05682 793 aaKnown RBP17.4■□□□□ 0.38
RBM28-208ENST00000495327 KIF6Q6ZMV9 814 aa17.4■□□□□ 0.38
RBM28-208ENST00000495327 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
RBM28-208ENST00000495327 IBTKQ9P2D0 1353 aaPredicted RBP17.4■□□□□ 0.38
RBM28-208ENST00000495327 FER1L6Q2WGJ9 1857 aa17.39■□□□□ 0.38
RBM28-208ENST00000495327 H0YIN7 160 aa17.39■□□□□ 0.37
RBM28-208ENST00000495327 ZNF853P0CG23 659 aa17.39■□□□□ 0.37
RBM28-208ENST00000495327 PDIA6Q15084 440 aa17.39■□□□□ 0.37
RBM28-208ENST00000495327 HLFQ16534 295 aa17.39■□□□□ 0.37
RBM28-208ENST00000495327 TTLL7Q6ZT98 887 aa17.39■□□□□ 0.37
RBM28-208ENST00000495327 C2CD5Q86YS7 1000 aa17.39■□□□□ 0.37
RBM28-208ENST00000495327 IFT57Q9NWB7 429 aa17.39■□□□□ 0.37
RBM28-208ENST00000495327 NIP7Q9Y221 180 aaKnown RBP eCLIP17.39■□□□□ 0.37
RBM28-208ENST00000495327 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.37
RBM28-208ENST00000495327 CCDC88AQ3V6T2 1871 aa17.38■□□□□ 0.37
RBM28-208ENST00000495327 EIF2S2P20042 333 aaKnown RBP17.38■□□□□ 0.37
RBM28-208ENST00000495327 NBPF5PQ86XG9 351 aaPredicted RBP17.38■□□□□ 0.37
RBM28-208ENST00000495327 TIAM2Q8IVF5 1701 aa17.38■□□□□ 0.37
RBM28-208ENST00000495327 RIC1Q4ADV7 1423 aa17.38■□□□□ 0.37
RBM28-208ENST00000495327 NPHP1O15259 732 aa17.37■□□□□ 0.37
RBM28-208ENST00000495327 GNAI1P63096 354 aa17.37■□□□□ 0.37
RBM28-208ENST00000495327 KRT24Q2M2I5 525 aa17.37■□□□□ 0.37
RBM28-208ENST00000495327 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
RBM28-208ENST00000495327 NGEFQ8N5V2 710 aa17.37■□□□□ 0.37
RBM28-208ENST00000495327 MBIPQ9NS73 344 aa17.37■□□□□ 0.37
RBM28-208ENST00000495327 SLX4Q8IY92 1834 aa17.37■□□□□ 0.37
RBM28-208ENST00000495327 CCDC27Q2M243 656 aa17.36■□□□□ 0.37
RBM28-208ENST00000495327 ARHGAP27Q6ZUM4 889 aa17.36■□□□□ 0.37
RBM28-208ENST00000495327 TTLL6Q8N841 843 aa17.36■□□□□ 0.37
RBM28-208ENST00000495327 DICER1Q9UPY3 1922 aaKnown RBP17.36■□□□□ 0.37
RBM28-208ENST00000495327 PROSER3Q2NL68 480 aa17.35■□□□□ 0.37
RBM28-208ENST00000495327 TPTE2Q6XPS3 522 aa17.35■□□□□ 0.37
RBM28-208ENST00000495327 GIGYF2Q6Y7W6 1299 aaKnown RBP17.35■□□□□ 0.37
RBM28-208ENST00000495327 CCDC24Q8N4L8 307 aa17.35■□□□□ 0.37
RBM28-208ENST00000495327 ZBTB3Q9H5J0 574 aa17.35■□□□□ 0.37
RBM28-208ENST00000495327 DDX21Q9NR30 783 aaKnown RBP eCLIP17.35■□□□□ 0.37
RBM28-208ENST00000495327 LAMB2P55268 1798 aa17.34■□□□□ 0.37
RBM28-208ENST00000495327 HDGFL1Q5TGJ6 251 aa17.34■□□□□ 0.37
RBM28-208ENST00000495327 UBN2Q6ZU65 1347 aa17.34■□□□□ 0.37
RBM28-208ENST00000495327 NYXQ9GZU5 481 aa17.34■□□□□ 0.37
RBM28-208ENST00000495327 KLRG2A4D1S0 409 aaPredicted RBP17.33■□□□□ 0.36
RBM28-208ENST00000495327 ANXA1P04083 346 aa17.33■□□□□ 0.36
RBM28-208ENST00000495327 SRGNP10124 158 aa17.33■□□□□ 0.36
RBM28-208ENST00000495327 STYK1Q6J9G0 422 aa17.33■□□□□ 0.36
RBM28-208ENST00000495327 ABCC12Q96J65 1359 aa17.32■□□□□ 0.36
RBM28-208ENST00000495327 DUSP27Q5VZP5 1158 aa17.32■□□□□ 0.36
RBM28-208ENST00000495327 ZNF34Q8IZ26 560 aa17.32■□□□□ 0.36
RBM28-208ENST00000495327 NECTIN2Q92692 538 aa17.32■□□□□ 0.36
RBM28-208ENST00000495327 MASTLQ96GX5 879 aa17.32■□□□□ 0.36
RBM28-208ENST00000495327 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
RBM28-208ENST00000495327 CNKSR1Q969H4 720 aa17.31■□□□□ 0.36
RBM28-208ENST00000495327 ZNF622Q969S3 477 aaKnown RBP eCLIP17.31■□□□□ 0.368e-14■□□□□ 11.3
RBM28-208ENST00000495327 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
RBM28-208ENST00000495327 IL16Q14005 1332 aa17.3■□□□□ 0.36
RBM28-208ENST00000495327 CACNA1FO60840 1977 aa17.3■□□□□ 0.36
RBM28-208ENST00000495327 GPTP24298 496 aa17.3■□□□□ 0.36
RBM28-208ENST00000495327 PARP10Q53GL7 1025 aa17.3■□□□□ 0.36
RBM28-208ENST00000495327 HSP90AB3PQ58FF7 597 aa17.3■□□□□ 0.36
RBM28-208ENST00000495327 COPS6Q7L5N1 327 aa17.3■□□□□ 0.36
RBM28-208ENST00000495327 WWC1Q8IX03 1113 aa17.3■□□□□ 0.36
RBM28-208ENST00000495327 XAGE3Q8WTP9 111 aa17.3■□□□□ 0.36
RBM28-208ENST00000495327 DDX60Q8IY21 1712 aaKnown RBP17.3■□□□□ 0.36
RBM28-208ENST00000495327 RNF123Q5XPI4 1314 aa17.29■□□□□ 0.36
RBM28-208ENST00000495327 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
RBM28-208ENST00000495327 NTSR2O95665 410 aa17.29■□□□□ 0.36
RBM28-208ENST00000495327 NPR1P16066 1061 aa17.29■□□□□ 0.36
RBM28-208ENST00000495327 C9orf131Q5VYM1 1079 aa17.29■□□□□ 0.36
RBM28-208ENST00000495327 PRPF40BQ6NWY9 871 aaKnown RBP17.29■□□□□ 0.36
RBM28-208ENST00000495327 GPBP1L1Q9HC44 474 aaPredicted RBP17.29■□□□□ 0.36
RBM28-208ENST00000495327 ZC3H4Q9UPT8 1303 aaKnown RBP17.28■□□□□ 0.36
RBM28-208ENST00000495327 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
RBM28-208ENST00000495327 RASSF7Q02833 373 aa17.28■□□□□ 0.36
RBM28-208ENST00000495327 CRY2Q49AN0 593 aa17.28■□□□□ 0.36
RBM28-208ENST00000495327 PPP1R42Q7Z4L9 355 aa17.28■□□□□ 0.36
RBM28-208ENST00000495327 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
RBM28-208ENST00000495327 LTBP3Q9NS15 1303 aa17.27■□□□□ 0.36
RBM28-208ENST00000495327 NFKBIEO00221 500 aa17.27■□□□□ 0.36
RBM28-208ENST00000495327 AIMP1Q12904 312 aaKnown RBP17.27■□□□□ 0.36
RBM28-208ENST00000495327 ERFEQ4G0M1 354 aa17.27■□□□□ 0.36
RBM28-208ENST00000495327 SUSD4Q5VX71 490 aa17.27■□□□□ 0.36
RBM28-208ENST00000495327 NUTM1Q86Y26 1132 aa17.27■□□□□ 0.36
RBM28-208ENST00000495327 RNF181Q9P0P0 153 aa17.27■□□□□ 0.36
RBM28-208ENST00000495327 LMNB1P20700 586 aa17.26■□□□□ 0.35
RBM28-208ENST00000495327 SOGA3Q5TF21 947 aa17.26■□□□□ 0.35
RBM28-208ENST00000495327 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
RBM28-208ENST00000495327 C21orf2O43822 256 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms