RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 CCDC30Q5VVM6 783 aa7.11□□□□□ -1.27
PHC3-214ENST00000494943 CERS3Q8IU89 383 aa7.11□□□□□ -1.27
PHC3-214ENST00000494943 DHX37Q8IY37 1157 aaKnown RBP7.11□□□□□ -1.27
PHC3-214ENST00000494943 FAM71BQ8TC56 605 aa7.11□□□□□ -1.27
PHC3-214ENST00000494943 MPHOSPH8Q99549 860 aa7.11□□□□□ -1.27
PHC3-214ENST00000494943 LAMC1P11047 1609 aa7.11□□□□□ -1.27
PHC3-214ENST00000494943 PSDA5PKW4 1024 aaPredicted RBP7.11□□□□□ -1.27
PHC3-214ENST00000494943 INPP5BP32019 993 aa7.11□□□□□ -1.27
PHC3-214ENST00000494943 MMP14P50281 582 aa7.11□□□□□ -1.27
PHC3-214ENST00000494943 TMEM57Q8N5G2 664 aa7.11□□□□□ -1.27
PHC3-214ENST00000494943 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.11□□□□□ -1.27
PHC3-214ENST00000494943 CYP46A1Q9Y6A2 500 aa7.11□□□□□ -1.27
PHC3-214ENST00000494943 TTC41PQ6P2S7 1318 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 CFAP74Q9C0B2 1584 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 F13A1P00488 732 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 CHRM1P11229 460 aaPredicted RBP7.1□□□□□ -1.27
PHC3-214ENST00000494943 PIP4K2BP78356 416 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 CXorf56Q9H5V9 222 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 VEZTQ9HBM0 779 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 LIMCH1Q9UPQ0 1083 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 CCDC69A6NI79 296 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 FCHSD1Q86WN1 690 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 USP26Q9BXU7 913 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 SUFUQ9UMX1 484 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 FAM177BA6PVY3 158 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 SLC8A1P32418 973 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 HDGFL2Q7Z4V5 671 aaPredicted RBP7.1□□□□□ -1.27
PHC3-214ENST00000494943 SRLQ86TD4 932 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 TICAM2Q86XR7 235 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 CAGE1Q8TC20 777 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 CKAP4Q07065 602 aaKnown RBP7.1□□□□□ -1.27
PHC3-214ENST00000494943 IFFO1Q0D2I5 559 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 ANO6Q4KMQ2 910 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 NBPF6Q5VWK0 638 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 NBPF5PQ86XG9 351 aaPredicted RBP7.1□□□□□ -1.27
PHC3-214ENST00000494943 SUGP1Q8IWZ8 645 aaKnown RBP7.1□□□□□ -1.27
PHC3-214ENST00000494943 MRFAP1L1Q96HT8 127 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 NBPF4Q96M43 638 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 SHANK2Q9UPX8 1470 aa7.1□□□□□ -1.27
PHC3-214ENST00000494943 PPP1R12AO14974 1030 aaPredicted RBP7.09□□□□□ -1.27
PHC3-214ENST00000494943 FILIP1LQ4L180 1135 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 OTUD6BQ8N6M0 293 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 ADGRL2O95490 1459 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 HSPA4P34932 840 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 NEK11Q8NG66 645 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 CNKSR2Q8WXI2 1034 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 FAM210AQ96ND0 272 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 CLNS1AP54105 237 aaKnown RBP7.09□□□□□ -1.27
PHC3-214ENST00000494943 EVCP57679 992 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 TSC1Q92574 1164 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 RBM33Q96EV2 1170 aaKnown RBP7.09□□□□□ -1.27
PHC3-214ENST00000494943 NBPF3Q9H094 633 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.09□□□□□ -1.27
PHC3-214ENST00000494943 C9orf84Q5VXU9 1444 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 NEBLO76041 1014 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 SERPINC1P01008 464 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 TRIM27P14373 513 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 LARP1BQ659C4 914 aaKnown RBP7.09□□□□□ -1.27
PHC3-214ENST00000494943 KIF1BPQ96EK5 621 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 SDF4Q9BRK5 362 aa7.09□□□□□ -1.27
PHC3-214ENST00000494943 PZPP20742 1482 aa7.09□□□□□ -1.28
PHC3-214ENST00000494943 NPHP3Q7Z494 1330 aa7.09□□□□□ -1.28
PHC3-214ENST00000494943 CARMIL2Q6F5E8 1435 aa7.09□□□□□ -1.28
PHC3-214ENST00000494943 ADGRL1O94910 1474 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 DISP3Q9P2K9 1392 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 PPFIA3O75145 1194 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 FAM76AQ8TAV0 307 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 SH3GL3Q99963 347 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 SLMAPQ14BN4 828 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 GIMAP6Q6P9H5 292 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 CCAR1Q8IX12 1150 aaKnown RBP7.08□□□□□ -1.28
PHC3-214ENST00000494943 ZNF215Q9UL58 517 aaPredicted RBP7.08□□□□□ -1.28
PHC3-214ENST00000494943 PYCARDQ9ULZ3 195 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 APBB1O00213 710 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 PER1O15534 1290 aaPredicted RBP7.08□□□□□ -1.28
PHC3-214ENST00000494943 PNMA6AP0CW24 399 aaPredicted RBP7.08□□□□□ -1.28
PHC3-214ENST00000494943 PPFIBP1Q86W92 1011 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 PDRG1Q9NUG6 133 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 BSDC1Q9NW68 430 aaPredicted RBP7.08□□□□□ -1.28
PHC3-214ENST00000494943 TRMT1Q9NXH9 659 aaKnown RBP7.08□□□□□ -1.28
PHC3-214ENST00000494943 ZCCHC11Q5TAX3 1644 aaKnown RBP7.08□□□□□ -1.28
PHC3-214ENST00000494943 PPP2R3AQ06190 1150 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 KIF4BQ2VIQ3 1234 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 ATL3Q6DD88 541 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 TADA2BQ86TJ2 420 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 TDRD7Q8NHU6 1098 aaKnown RBP7.08□□□□□ -1.28
PHC3-214ENST00000494943 TMX1Q9H3N1 280 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 CENPHQ9H3R5 247 aa7.08□□□□□ -1.28
PHC3-214ENST00000494943 RLBP1P12271 317 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 JMYQ8N9B5 988 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 EHBP1Q8NDI1 1231 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 DYDC1Q8WWB3 177 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 CLSTN2Q9H4D0 955 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 ZSCAN16Q9H4T2 348 aaPredicted RBP7.07□□□□□ -1.28
PHC3-214ENST00000494943 TULP1O00294 542 aaPredicted RBP7.07□□□□□ -1.28
PHC3-214ENST00000494943 AKAP17AQ02040 695 aaKnown RBP7.07□□□□□ -1.28
PHC3-214ENST00000494943 PDILTQ8N807 584 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 RABGGTAQ92696 567 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 CABS1Q96KC9 395 aa7.07□□□□□ -1.28
PHC3-214ENST00000494943 RNF216Q9NWF9 866 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms