RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 VGLL3A8MV65 326 aa8.55□□□□□ -1.04
EPHA3-203ENST00000494014 IP6K1Q92551 441 aa8.55□□□□□ -1.04
EPHA3-203ENST00000494014 RGPD2P0DJD1 1756 aa8.55□□□□□ -1.04
EPHA3-203ENST00000494014 U2AF2P26368 475 aaKnown RBP eCLIP8.55□□□□□ -1.04
EPHA3-203ENST00000494014 IRX5P78411 483 aaPredicted RBP8.55□□□□□ -1.04
EPHA3-203ENST00000494014 CHD1LQ86WJ1 897 aa8.55□□□□□ -1.04
EPHA3-203ENST00000494014 KLHL34Q8N239 644 aa8.55□□□□□ -1.04
EPHA3-203ENST00000494014 TSC1Q92574 1164 aa8.55□□□□□ -1.04
EPHA3-203ENST00000494014 TIGD1Q96MW7 591 aa8.55□□□□□ -1.04
EPHA3-203ENST00000494014 RBM27Q9P2N5 1060 aaKnown RBP8.55□□□□□ -1.04
EPHA3-203ENST00000494014 SGIP1Q9BQI5 828 aa8.55□□□□□ -1.04
EPHA3-203ENST00000494014 CALCOCO1Q9P1Z2 691 aa8.55□□□□□ -1.04
EPHA3-203ENST00000494014 R3HDM1Q15032 1099 aaKnown RBP8.54□□□□□ -1.04
EPHA3-203ENST00000494014 SLC27A3Q5K4L6 730 aa8.54□□□□□ -1.04
EPHA3-203ENST00000494014 SPON1Q9HCB6 807 aa8.54□□□□□ -1.04
EPHA3-203ENST00000494014 MAP2P11137 1827 aaKnown RBP8.54□□□□□ -1.04
EPHA3-203ENST00000494014 TOGARAM1Q9Y4F4 1720 aa8.54□□□□□ -1.04
EPHA3-203ENST00000494014 KCNJ4P48050 445 aa8.54□□□□□ -1.04
EPHA3-203ENST00000494014 TOM1L2Q6ZVM7 507 aa8.54□□□□□ -1.04
EPHA3-203ENST00000494014 CDC45O75419 566 aa8.53□□□□□ -1.04
EPHA3-203ENST00000494014 TBC1D9Q6ZT07 1266 aa8.53□□□□□ -1.04
EPHA3-203ENST00000494014 JARID2Q92833 1246 aaPredicted RBP8.53□□□□□ -1.04
EPHA3-203ENST00000494014 BCL2L13Q9BXK5 485 aa8.53□□□□□ -1.04
EPHA3-203ENST00000494014 TULP1O00294 542 aaPredicted RBP8.53□□□□□ -1.04
EPHA3-203ENST00000494014 IL2RBP14784 551 aa8.53□□□□□ -1.04
EPHA3-203ENST00000494014 RNF214Q8ND24 703 aa8.53□□□□□ -1.04
EPHA3-203ENST00000494014 GCC1Q96CN9 775 aa8.53□□□□□ -1.04
EPHA3-203ENST00000494014 KIF13BQ9NQT8 1826 aa8.53□□□□□ -1.04
EPHA3-203ENST00000494014 ITGB4P16144 1822 aa8.53□□□□□ -1.04
EPHA3-203ENST00000494014 A0A0G2JS52 829 aa8.52□□□□□ -1.04
EPHA3-203ENST00000494014 EXOC5O00471 708 aa8.52□□□□□ -1.04
EPHA3-203ENST00000494014 SLFN14P0C7P3 912 aa8.52□□□□□ -1.04
EPHA3-203ENST00000494014 ITPRIPQ8IWB1 547 aa8.52□□□□□ -1.04
EPHA3-203ENST00000494014 PROM2Q8N271 834 aa8.52□□□□□ -1.04
EPHA3-203ENST00000494014 SLC16A10Q8TF71 515 aa8.52□□□□□ -1.04
EPHA3-203ENST00000494014 RBM42Q9BTD8 480 aaKnown RBP8.52□□□□□ -1.04
EPHA3-203ENST00000494014 RIOK3O14730 519 aaKnown RBP8.52□□□□□ -1.05
EPHA3-203ENST00000494014 NUTM2GQ5VZR2 741 aa8.52□□□□□ -1.05
EPHA3-203ENST00000494014 LNPKQ9C0E8 428 aa8.52□□□□□ -1.05
EPHA3-203ENST00000494014 ZBTB40Q9NUA8 1239 aa8.52□□□□□ -1.05
EPHA3-203ENST00000494014 ST18O60284 1047 aa8.52□□□□□ -1.05
EPHA3-203ENST00000494014 PTGER2P43116 358 aa8.52□□□□□ -1.05
EPHA3-203ENST00000494014 IRX3P78415 501 aaPredicted RBP8.52□□□□□ -1.05
EPHA3-203ENST00000494014 ATF7IPQ6VMQ6 1270 aa8.52□□□□□ -1.05
EPHA3-203ENST00000494014 CTNNA3Q9UI47 895 aa8.52□□□□□ -1.05
EPHA3-203ENST00000494014 DDX41Q9UJV9 622 aaKnown RBP8.52□□□□□ -1.05
EPHA3-203ENST00000494014 MORC2Q9Y6X9 1032 aaPredicted RBP8.52□□□□□ -1.05
EPHA3-203ENST00000494014 PLCD3Q8N3E9 789 aa8.51□□□□□ -1.05
EPHA3-203ENST00000494014 PSDA5PKW4 1024 aaPredicted RBP8.51□□□□□ -1.05
EPHA3-203ENST00000494014 TULP2O00295 520 aa8.51□□□□□ -1.05
EPHA3-203ENST00000494014 TRIM27P14373 513 aa8.51□□□□□ -1.05
EPHA3-203ENST00000494014 TEX2Q8IWB9 1127 aa8.51□□□□□ -1.05
EPHA3-203ENST00000494014 KIAA1524Q8TCG1 905 aa8.51□□□□□ -1.05
EPHA3-203ENST00000494014 SMC4Q9NTJ3 1288 aa8.51□□□□□ -1.05
EPHA3-203ENST00000494014 IPO8O15397 1037 aaKnown RBP8.5□□□□□ -1.05
EPHA3-203ENST00000494014 TERF2Q15554 542 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 SLC15A2Q16348 729 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 PAXIP1Q6ZW49 1069 aaPredicted RBP8.5□□□□□ -1.05
EPHA3-203ENST00000494014 AKT1S1Q96B36 256 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 MTFR1LQ9H019 292 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 NSD3Q9BZ95 1437 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 UBR3Q6ZT12 1888 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 ZBTB22O15209 634 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 IGSF3O75054 1194 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 TXNRD1Q16881 649 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 MEGF6O75095 1541 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 ADAMTS7Q9UKP4 1686 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 GOLGA6L6A8MZA4 724 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 ANKRD24Q8TF21 1146 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 TTC12Q9H892 705 aaPredicted RBP8.5□□□□□ -1.05
EPHA3-203ENST00000494014 STK32BQ9NY57 414 aa8.5□□□□□ -1.05
EPHA3-203ENST00000494014 COL5A3P25940 1745 aaPredicted RBP8.5□□□□□ -1.05
EPHA3-203ENST00000494014 ADCY5O95622 1261 aa8.49□□□□□ -1.05
EPHA3-203ENST00000494014 NCBP1Q09161 790 aaKnown RBP8.49□□□□□ -1.05
EPHA3-203ENST00000494014 KRT222Q8N1A0 295 aa8.49□□□□□ -1.05
EPHA3-203ENST00000494014 ZDHHC9Q9Y397 364 aa8.49□□□□□ -1.05
EPHA3-203ENST00000494014 FAM177BA6PVY3 158 aa8.49□□□□□ -1.05
EPHA3-203ENST00000494014 PKP1Q13835 747 aa8.49□□□□□ -1.05
EPHA3-203ENST00000494014 NEUROD2Q15784 382 aa8.49□□□□□ -1.05
EPHA3-203ENST00000494014 FAM182BQ5T319 152 aa8.49□□□□□ -1.05
EPHA3-203ENST00000494014 NME9Q86XW9 330 aa8.49□□□□□ -1.05
EPHA3-203ENST00000494014 FLT4P35916 1363 aa8.49□□□□□ -1.05
EPHA3-203ENST00000494014 SMTNL1A8MU46 457 aa8.48□□□□□ -1.05
EPHA3-203ENST00000494014 CHRM1P11229 460 aaPredicted RBP8.48□□□□□ -1.05
EPHA3-203ENST00000494014 HOXC9P31274 260 aa8.48□□□□□ -1.05
EPHA3-203ENST00000494014 USP25Q9UHP3 1055 aa8.48□□□□□ -1.05
EPHA3-203ENST00000494014 NSFL1CQ9UNZ2 370 aaKnown RBP8.48□□□□□ -1.05
EPHA3-203ENST00000494014 C4BP0C0L5 1744 aa8.48□□□□□ -1.05
EPHA3-203ENST00000494014 MAP3K19Q56UN5 1328 aa8.48□□□□□ -1.05
EPHA3-203ENST00000494014 NKX1-1Q15270 411 aaPredicted RBP8.48□□□□□ -1.05
EPHA3-203ENST00000494014 TMEM57Q8N5G2 664 aa8.48□□□□□ -1.05
EPHA3-203ENST00000494014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.48□□□□□ -1.05
EPHA3-203ENST00000494014 RRP7AQ9Y3A4 280 aaKnown RBP8.48□□□□□ -1.05
EPHA3-203ENST00000494014 KIAA1551Q9HCM1 1747 aa8.47□□□□□ -1.05
EPHA3-203ENST00000494014 ZBTB7CA1YPR0 619 aa8.47□□□□□ -1.05
EPHA3-203ENST00000494014 MCM2P49736 904 aa8.47□□□□□ -1.05
EPHA3-203ENST00000494014 ANKRD45Q5TZF3 282 aa8.47□□□□□ -1.05
EPHA3-203ENST00000494014 YY1AP1Q9H869 796 aa8.47□□□□□ -1.05
EPHA3-203ENST00000494014 BRD1O95696 1058 aa8.47□□□□□ -1.05
EPHA3-203ENST00000494014 KIF18AQ8NI77 898 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms