RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 IL6STP40189 918 aaPredicted RBP20.73■□□□□ 0.91
EPHB4-209ENST00000492878 CNBD1Q8NA66 436 aa20.73■□□□□ 0.91
EPHB4-209ENST00000492878 TBC1D2BQ9UPU7 963 aa20.73■□□□□ 0.91
EPHB4-209ENST00000492878 THSD7BQ9C0I4 1608 aa20.73■□□□□ 0.91
EPHB4-209ENST00000492878 HEG1Q9ULI3 1381 aa20.72■□□□□ 0.91
EPHB4-209ENST00000492878 SIPA1L3O60292 1781 aaPredicted RBP20.72■□□□□ 0.91
EPHB4-209ENST00000492878 CAMTA2O94983 1202 aa20.72■□□□□ 0.91
EPHB4-209ENST00000492878 FAM161AQ3B820 660 aa20.72■□□□□ 0.91
EPHB4-209ENST00000492878 ZNF496Q96IT1 587 aaPredicted RBP20.72■□□□□ 0.91
EPHB4-209ENST00000492878 ZNF541Q9H0D2 1346 aa20.72■□□□□ 0.91
EPHB4-209ENST00000492878 TTC5Q8N0Z6 440 aa20.71■□□□□ 0.91
EPHB4-209ENST00000492878 SETDB2Q96T68 719 aa20.71■□□□□ 0.91
EPHB4-209ENST00000492878 TEX13AQ9BXU3 409 aaPredicted RBP20.71■□□□□ 0.91
EPHB4-209ENST00000492878 KLRG2A4D1S0 409 aaPredicted RBP20.7■□□□□ 0.9
EPHB4-209ENST00000492878 HMOX1P09601 288 aa20.7■□□□□ 0.9
EPHB4-209ENST00000492878 HACL1Q9UJ83 578 aa20.7■□□□□ 0.9
EPHB4-209ENST00000492878 RGS19P49795 217 aa20.69■□□□□ 0.9
EPHB4-209ENST00000492878 ST5P78524 1137 aa20.69■□□□□ 0.9
EPHB4-209ENST00000492878 MAP2K1Q02750 393 aaPredicted RBP20.69■□□□□ 0.9
EPHB4-209ENST00000492878 DEFB115Q30KQ5 88 aa20.69■□□□□ 0.9
EPHB4-209ENST00000492878 CCDC93Q567U6 631 aa20.69■□□□□ 0.9
EPHB4-209ENST00000492878 ZNF790Q6PG37 636 aa20.69■□□□□ 0.9
EPHB4-209ENST00000492878 EPHX2P34913 555 aa20.68■□□□□ 0.9
EPHB4-209ENST00000492878 FKBP4Q02790 459 aaKnown RBP eCLIP20.68■□□□□ 0.9
EPHB4-209ENST00000492878 EAPPQ56P03 285 aaPredicted RBP20.68■□□□□ 0.9
EPHB4-209ENST00000492878 WDR33Q9C0J8 1336 aaKnown RBP20.68■□□□□ 0.9
EPHB4-209ENST00000492878 PNMA8AQ86V59 439 aaPredicted RBP20.67■□□□□ 0.9
EPHB4-209ENST00000492878 CNTROBQ8N137 903 aa20.67■□□□□ 0.9
EPHB4-209ENST00000492878 FZD9O00144 591 aa20.66■□□□□ 0.9
EPHB4-209ENST00000492878 AMER1Q5JTC6 1135 aaPredicted RBP20.66■□□□□ 0.9
EPHB4-209ENST00000492878 ZNF277Q9NRM2 450 aaPredicted RBP20.66■□□□□ 0.9
EPHB4-209ENST00000492878 SNED1Q8TER0 1413 aa20.66■□□□□ 0.9
EPHB4-209ENST00000492878 A1BGP04217 495 aa20.65■□□□□ 0.9
EPHB4-209ENST00000492878 NPR1P16066 1061 aa20.65■□□□□ 0.9
EPHB4-209ENST00000492878 MAP1SQ66K74 1059 aaPredicted RBP20.65■□□□□ 0.9
EPHB4-209ENST00000492878 IL17REQ8NFR9 667 aa20.65■□□□□ 0.9
EPHB4-209ENST00000492878 PCDH10Q9P2E7 1040 aa20.65■□□□□ 0.9
EPHB4-209ENST00000492878 CLEC11AQ9Y240 323 aa20.64■□□□□ 0.89
EPHB4-209ENST00000492878 ZNF330Q9Y3S2 320 aaPredicted RBP20.64■□□□□ 0.89
EPHB4-209ENST00000492878 KNSTRNQ9Y448 316 aa20.64■□□□□ 0.89
EPHB4-209ENST00000492878 RNF123Q5XPI4 1314 aa20.63■□□□□ 0.89
EPHB4-209ENST00000492878 CLEC4GQ6UXB4 293 aa20.63■□□□□ 0.89
EPHB4-209ENST00000492878 RTKN2Q8IZC4 609 aa20.63■□□□□ 0.89
EPHB4-209ENST00000492878 GPC2Q8N158 579 aa20.63■□□□□ 0.89
EPHB4-209ENST00000492878 NPHP1O15259 732 aa20.62■□□□□ 0.89
EPHB4-209ENST00000492878 MLLT1Q03111 559 aaPredicted RBP20.62■□□□□ 0.89
EPHB4-209ENST00000492878 OLFM4Q6UX06 510 aa20.62■□□□□ 0.89
EPHB4-209ENST00000492878 DZIP3Q86Y13 1208 aaKnown RBP20.62■□□□□ 0.89
EPHB4-209ENST00000492878 FMNL2Q96PY5 1086 aa20.62■□□□□ 0.89
EPHB4-209ENST00000492878 LTBP1Q14766 1721 aa20.61■□□□□ 0.89
EPHB4-209ENST00000492878 CEMIPQ8WUJ3 1361 aa20.61■□□□□ 0.89
EPHB4-209ENST00000492878 RGL2O15211 777 aa20.61■□□□□ 0.89
EPHB4-209ENST00000492878 HSPA5P11021 654 aaKnown RBP20.61■□□□□ 0.89
EPHB4-209ENST00000492878 TEFQ10587 303 aa20.61■□□□□ 0.89
EPHB4-209ENST00000492878 NBPF5PQ86XG9 351 aaPredicted RBP20.61■□□□□ 0.89
EPHB4-209ENST00000492878 DDX21Q9NR30 783 aaKnown RBP eCLIP20.61■□□□□ 0.89
EPHB4-209ENST00000492878 DIAPH1O60610 1272 aaKnown RBP20.6■□□□□ 0.89
EPHB4-209ENST00000492878 IARSP41252 1262 aaKnown RBP20.6■□□□□ 0.89
EPHB4-209ENST00000492878 EIF4G2P78344 907 aaKnown RBP eCLIP20.6■□□□□ 0.89
EPHB4-209ENST00000492878 TNRC18O15417 2968 aaPredicted RBP20.6■□□□□ 0.89
EPHB4-209ENST00000492878 COL4A5P29400 1685 aa20.59■□□□□ 0.89
EPHB4-209ENST00000492878 COL3A1P02461 1466 aaPredicted RBP20.59■□□□□ 0.89
EPHB4-209ENST00000492878 GNAT3A8MTJ3 354 aa20.59■□□□□ 0.89
EPHB4-209ENST00000492878 ABT1Q9ULW3 272 aaKnown RBP20.59■□□□□ 0.89
EPHB4-209ENST00000492878 NPM2Q86SE8 214 aaKnown RBP20.58■□□□□ 0.89
EPHB4-209ENST00000492878 SYNE4Q8N205 404 aa20.58■□□□□ 0.89
EPHB4-209ENST00000492878 CAPNS2Q96L46 248 aa20.58■□□□□ 0.89
EPHB4-209ENST00000492878 PSMD1Q99460 953 aa20.58■□□□□ 0.89
EPHB4-209ENST00000492878 TRPM7Q96QT4 1865 aa20.56■□□□□ 0.88
EPHB4-209ENST00000492878 CCDC85CA6NKD9 419 aa20.56■□□□□ 0.88
EPHB4-209ENST00000492878 KCNQ3O43525 872 aa20.56■□□□□ 0.88
EPHB4-209ENST00000492878 TPTE2Q6XPS3 522 aa20.56■□□□□ 0.88
EPHB4-209ENST00000492878 GAS2L2Q8NHY3 880 aa20.56■□□□□ 0.88
EPHB4-209ENST00000492878 ZNF652Q9Y2D9 606 aa20.56■□□□□ 0.88
EPHB4-209ENST00000492878 USP16Q9Y5T5 823 aa20.56■□□□□ 0.88
EPHB4-209ENST00000492878 ALDH1B1P30837 517 aa20.55■□□□□ 0.88
EPHB4-209ENST00000492878 ECE1P42892 770 aa20.55■□□□□ 0.88
EPHB4-209ENST00000492878 GPR101Q96P66 508 aaPredicted RBP20.55■□□□□ 0.88
EPHB4-209ENST00000492878 PIP4K2AP48426 406 aaPredicted RBP20.54■□□□□ 0.88
EPHB4-209ENST00000492878 SCNN1DP51172 638 aa20.54■□□□□ 0.88
EPHB4-209ENST00000492878 FMR1Q06787 632 aaKnown RBP eCLIP20.54■□□□□ 0.889e-6■■■■□ 20.6
EPHB4-209ENST00000492878 CST9Q5W186 159 aa20.54■□□□□ 0.88
EPHB4-209ENST00000492878 CRY2Q49AN0 593 aa20.53■□□□□ 0.88
EPHB4-209ENST00000492878 CYP4F22Q6NT55 531 aa20.53■□□□□ 0.88
EPHB4-209ENST00000492878 JDP2Q8WYK2 163 aa20.53■□□□□ 0.88
EPHB4-209ENST00000492878 TLL2Q9Y6L7 1015 aa20.53■□□□□ 0.88
EPHB4-209ENST00000492878 PRAMEF22A3QJZ6 481 aa20.52■□□□□ 0.88
EPHB4-209ENST00000492878 MAP2K2P36507 400 aa20.52■□□□□ 0.88
EPHB4-209ENST00000492878 BEGAINQ9BUH8 593 aa20.52■□□□□ 0.88
EPHB4-209ENST00000492878 NIP7Q9Y221 180 aaKnown RBP eCLIP20.52■□□□□ 0.88
EPHB4-209ENST00000492878 BTBD11A6QL63 1104 aa20.51■□□□□ 0.87
EPHB4-209ENST00000492878 NBPF26B4DH59 902 aa20.51■□□□□ 0.87
EPHB4-209ENST00000492878 EPS15P42566 896 aa20.51■□□□□ 0.87
EPHB4-209ENST00000492878 NBPF10Q6P3W6 841 aaKnown RBP20.51■□□□□ 0.87
EPHB4-209ENST00000492878 NBPF15Q8N660 670 aa20.51■□□□□ 0.87
EPHB4-209ENST00000492878 PER1O15534 1290 aaPredicted RBP20.5■□□□□ 0.87
EPHB4-209ENST00000492878 EIF6P56537 245 aaKnown RBP20.5■□□□□ 0.87
EPHB4-209ENST00000492878 CC2D2BQ6DHV5 1058 aa20.5■□□□□ 0.87
EPHB4-209ENST00000492878 USP50Q70EL3 339 aaPredicted RBP20.5■□□□□ 0.87
EPHB4-209ENST00000492878 TRAF5O00463 557 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms