RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 USP48Q86UV5 1035 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 UNC13AQ9UPW8 1703 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 CCP110O43303 1012 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 XRCC6P12956 609 aaKnown RBP eCLIP6.26□□□□□ -1.41
FN1-224ENST00000492816 CFAP58Q5T655 872 aa6.26□□□□□ -1.41
FN1-224ENST00000492816 SPINK5Q9NQ38 1064 aaPredicted RBP6.26□□□□□ -1.41
FN1-224ENST00000492816 MVPQ14764 893 aaKnown RBP6.25□□□□□ -1.41
FN1-224ENST00000492816 STK38Q15208 465 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 DCAF15Q66K64 600 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 C1orf228Q6PIY5 440 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 GSDMBQ8TAX9 411 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 NUDT16Q96DE0 195 aaKnown RBP6.25□□□□□ -1.41
FN1-224ENST00000492816 ARHGEF10LQ9HCE6 1279 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 FGD5Q6ZNL6 1462 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 DDX11L8A8MPP1 907 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 CDAN1Q8IWY9 1227 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 CCDC89Q8N998 374 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 ZBED2Q9BTP6 218 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 KAT14Q9H8E8 782 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 HYPKQ9NX55 129 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 KRT32Q14532 448 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 FAM47CQ5HY64 1035 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 CNBD1Q8NA66 436 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 RANBP6O60518 1105 aaKnown RBP6.25□□□□□ -1.41
FN1-224ENST00000492816 OTUD6BQ8N6M0 293 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 PUF60Q9UHX1 559 aaKnown RBP6.25□□□□□ -1.41
FN1-224ENST00000492816 DKC1O60832 514 aaKnown RBP eCLIP6.25□□□□□ -1.414e-32■□□□□ 9.7
FN1-224ENST00000492816 CCNA1P78396 465 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 DDX11Q96FC9 970 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 QTRT2Q9H974 415 aaKnown RBP6.25□□□□□ -1.41
FN1-224ENST00000492816 AAMPQ13685 434 aa6.25□□□□□ -1.41
FN1-224ENST00000492816 LEO1Q8WVC0 666 aaPredicted RBP6.25□□□□□ -1.41
FN1-224ENST00000492816 RPRD2Q5VT52 1461 aaKnown RBP6.24□□□□□ -1.41
FN1-224ENST00000492816 GRIN3BO60391 1043 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 CCDC129Q6ZRS4 1044 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 EIF4G3O43432 1585 aaKnown RBP6.24□□□□□ -1.41
FN1-224ENST00000492816 GNPATO15228 680 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 CCDC85AQ96PX6 553 aaPredicted RBP6.24□□□□□ -1.41
FN1-224ENST00000492816 C19orf44Q9H6X5 657 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 LRFN2Q9ULH4 789 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 ARL1P40616 181 aaPredicted RBP6.24□□□□□ -1.41
FN1-224ENST00000492816 CCDC77Q9BR77 488 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 CASTP20810 708 aaKnown RBP6.24□□□□□ -1.41
FN1-224ENST00000492816 CALML4Q96GE6 196 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 TTC12Q9H892 705 aaPredicted RBP6.24□□□□□ -1.41
FN1-224ENST00000492816 VPS8Q8N3P4 1428 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 SNAPC4Q5SXM2 1469 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 F8W031 263 aaPredicted RBP6.24□□□□□ -1.41
FN1-224ENST00000492816 IL2RBP14784 551 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 AMPD3Q01432 767 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 SKOR2Q2VWA4 1001 aaPredicted RBP6.24□□□□□ -1.41
FN1-224ENST00000492816 IQCEQ6IPM2 695 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 FILIP1Q7Z7B0 1213 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 ODF2LQ9ULJ1 636 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 CEP83Q9Y592 693 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 BICRAQ9NZM4 1560 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 CALM1P0DP23 149 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 CALM2P0DP24 149 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 CALM3P0DP25 149 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 GCNAQ96QF7 691 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 C6orf50Q9HD87 102 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 BRPF1P55201 1214 aaPredicted RBP6.24□□□□□ -1.41
FN1-224ENST00000492816 HSP90B2PQ58FF3 399 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 ABI1Q8IZP0 508 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 C2orf69Q8N8R5 385 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 HAUS7Q99871 368 aa6.24□□□□□ -1.41
FN1-224ENST00000492816 CWC25Q9NXE8 425 aaPredicted RBP6.24□□□□□ -1.41
FN1-224ENST00000492816 KDM2BQ8NHM5 1336 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 NDC80O14777 642 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 RSPH3Q86UC2 560 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 PPFIBP1Q86W92 1011 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 TAF4BQ92750 862 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 U3KPZ7 1027 aaPredicted RBP6.23□□□□□ -1.41
FN1-224ENST00000492816 SMARCA4P51532 1647 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 CCDC194A0A1B0GVG4 234 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 SRGAP3O43295 1099 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 CCDC172P0C7W6 258 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 CALRP27797 417 aaKnown RBP6.23□□□□□ -1.41
FN1-224ENST00000492816 MAP3K11Q16584 847 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 SMARCC2Q8TAQ2 1214 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 OSBPP22059 807 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 TSPY2A6NKD2 308 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 TBCAO75347 108 aaKnown RBP6.23□□□□□ -1.41
FN1-224ENST00000492816 UQCRFS1P1P0C7P4 283 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 GPTP24298 496 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 CERS3Q8IU89 383 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 GABPB2Q8TAK5 448 aaPredicted RBP6.23□□□□□ -1.41
FN1-224ENST00000492816 MAP3K7O43318 606 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 ZBED4O75132 1171 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 DNM2P50570 870 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 TEX35Q5T0J7 233 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 NIP7Q9Y221 180 aaKnown RBP eCLIP6.23□□□□□ -1.415e-29■■□□□ 11.5
FN1-224ENST00000492816 TSPY3P0CV98 308 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 TSPY8P0CW00 308 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 CEBPAP49715 358 aaPredicted RBP6.23□□□□□ -1.41
FN1-224ENST00000492816 AACSQ86V21 672 aa6.23□□□□□ -1.41
FN1-224ENST00000492816 HSPA2P54652 639 aa6.22□□□□□ -1.41
FN1-224ENST00000492816 DDX12PQ92771 950 aa6.22□□□□□ -1.41
FN1-224ENST00000492816 CCER2I3L3R5 266 aa6.22□□□□□ -1.41
FN1-224ENST00000492816 PRKAR2BP31323 418 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms