RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 PLEKHH1Q9ULM0 1364 aa6.47□□□□□ -1.37
UBR4-215ENST00000492606 H0YGN5 161 aa6.47□□□□□ -1.37
UBR4-215ENST00000492606 MAP2K2P36507 400 aa6.47□□□□□ -1.37
UBR4-215ENST00000492606 PADI6Q6TGC4 694 aa6.47□□□□□ -1.37
UBR4-215ENST00000492606 METTL3Q86U44 580 aaKnown RBP6.47□□□□□ -1.37
UBR4-215ENST00000492606 NLRP7Q8WX94 980 aa6.47□□□□□ -1.37
UBR4-215ENST00000492606 LRCH3Q96II8 777 aa6.47□□□□□ -1.37
UBR4-215ENST00000492606 FAM198AQ9UFP1 575 aa6.47□□□□□ -1.37
UBR4-215ENST00000492606 STXBP5LQ9Y2K9 1186 aa6.47□□□□□ -1.37
UBR4-215ENST00000492606 ADGRG1Q9Y653 693 aa6.47□□□□□ -1.37
UBR4-215ENST00000492606 LY75O60449 1722 aa6.46□□□□□ -1.38
UBR4-215ENST00000492606 ECE1P42892 770 aa6.46□□□□□ -1.38
UBR4-215ENST00000492606 TGFB2P61812 414 aa6.46□□□□□ -1.38
UBR4-215ENST00000492606 MDM2Q00987 491 aaPredicted RBP6.46□□□□□ -1.38
UBR4-215ENST00000492606 TTLL12Q14166 644 aaPredicted RBP6.46□□□□□ -1.38
UBR4-215ENST00000492606 ALYREFQ86V81 257 aaKnown RBP6.46□□□□□ -1.38
UBR4-215ENST00000492606 AMIGO3Q86WK7 504 aa6.46□□□□□ -1.38
UBR4-215ENST00000492606 PXYLP1Q8TE99 480 aa6.46□□□□□ -1.38
UBR4-215ENST00000492606 ZDHHC16Q969W1 377 aa6.46□□□□□ -1.38
UBR4-215ENST00000492606 RRP7BPQ9NSQ0 103 aa6.46□□□□□ -1.38
UBR4-215ENST00000492606 IFT172Q9UG01 1749 aa6.45□□□□□ -1.38
UBR4-215ENST00000492606 EEA1Q15075 1411 aa6.45□□□□□ -1.38
UBR4-215ENST00000492606 TMEM265A0A087WTH1 108 aa6.45□□□□□ -1.38
UBR4-215ENST00000492606 C3orf80F5H4A9 247 aa6.45□□□□□ -1.38
UBR4-215ENST00000492606 CIAPIN1Q6FI81 312 aa6.45□□□□□ -1.38
UBR4-215ENST00000492606 CTU1Q7Z7A3 348 aaKnown RBP6.45□□□□□ -1.38
UBR4-215ENST00000492606 ZNF454Q8N9F8 522 aa6.45□□□□□ -1.38
UBR4-215ENST00000492606 GPCPD1Q9NPB8 672 aa6.45□□□□□ -1.38
UBR4-215ENST00000492606 EYSQ5T1H1 3165 aa6.45□□□□□ -1.38
UBR4-215ENST00000492606 KIAA0100Q14667 2235 aaKnown RBP6.45□□□□□ -1.38
UBR4-215ENST00000492606 CACNA1BQ00975 2339 aa6.44□□□□□ -1.38
UBR4-215ENST00000492606 CENPFP49454 3210 aa6.44□□□□□ -1.38
UBR4-215ENST00000492606 SSTR3P32745 418 aaPredicted RBP6.44□□□□□ -1.38
UBR4-215ENST00000492606 FMR1Q06787 632 aaKnown RBP eCLIP6.44□□□□□ -1.384e-7■■■■■ 27
UBR4-215ENST00000492606 LDHDQ86WU2 507 aa6.44□□□□□ -1.38
UBR4-215ENST00000492606 ZIC5Q96T25 663 aa6.44□□□□□ -1.38
UBR4-215ENST00000492606 ZMYND15Q9H091 742 aa6.44□□□□□ -1.38
UBR4-215ENST00000492606 ZSWIM6Q9HCJ5 1215 aa6.44□□□□□ -1.38
UBR4-215ENST00000492606 FAM217BQ9NTX9 383 aaPredicted RBP6.44□□□□□ -1.38
UBR4-215ENST00000492606 LHX6Q9UPM6 363 aa6.44□□□□□ -1.38
UBR4-215ENST00000492606 PRUNE2Q8WUY3 3088 aa6.44□□□□□ -1.38
UBR4-215ENST00000492606 ANKRD30BQ9BXX2 1392 aa6.44□□□□□ -1.38
UBR4-215ENST00000492606 ITSN1Q15811 1721 aa6.43□□□□□ -1.38
UBR4-215ENST00000492606 TOGARAM1Q9Y4F4 1720 aa6.43□□□□□ -1.38
UBR4-215ENST00000492606 MUC6Q6W4X9 2439 aa6.43□□□□□ -1.38
UBR4-215ENST00000492606 EXOC5O00471 708 aa6.43□□□□□ -1.38
UBR4-215ENST00000492606 CLCN1P35523 988 aa6.43□□□□□ -1.38
UBR4-215ENST00000492606 NUTM2GQ5VZR2 741 aa6.43□□□□□ -1.38
UBR4-215ENST00000492606 Q7L0L9 218 aa6.43□□□□□ -1.38
UBR4-215ENST00000492606 PAPPA2Q9BXP8 1791 aa6.43□□□□□ -1.38
UBR4-215ENST00000492606 ADAMTSL1Q8N6G6 1762 aa6.42□□□□□ -1.38
UBR4-215ENST00000492606 PRSS12P56730 875 aa6.42□□□□□ -1.38
UBR4-215ENST00000492606 DOK7Q18PE1 504 aa6.42□□□□□ -1.38
UBR4-215ENST00000492606 SH3D19Q5HYK7 790 aa6.42□□□□□ -1.38
UBR4-215ENST00000492606 PRO3102Q9H379 93 aa6.42□□□□□ -1.38
UBR4-215ENST00000492606 SETXQ7Z333 2677 aaKnown RBP6.41□□□□□ -1.38
UBR4-215ENST00000492606 OATP04181 439 aa6.41□□□□□ -1.38
UBR4-215ENST00000492606 LMNB1P20700 586 aa6.41□□□□□ -1.38
UBR4-215ENST00000492606 ZNF326Q5BKZ1 582 aaKnown RBP6.41□□□□□ -1.38
UBR4-215ENST00000492606 TOM1L2Q6ZVM7 507 aa6.41□□□□□ -1.38
UBR4-215ENST00000492606 CDCA7LQ96GN5 454 aa6.41□□□□□ -1.38
UBR4-215ENST00000492606 EYA1Q99502 592 aa6.41□□□□□ -1.38
UBR4-215ENST00000492606 ACIN1Q9UKV3 1341 aaKnown RBP6.41□□□□□ -1.38
UBR4-215ENST00000492606 CPDO75976 1380 aa6.41□□□□□ -1.38
UBR4-215ENST00000492606 E9PCH4 1651 aa6.4□□□□□ -1.38
UBR4-215ENST00000492606 DALRD3Q5D0E6 543 aaKnown RBP6.4□□□□□ -1.38
UBR4-215ENST00000492606 MAP1SQ66K74 1059 aaPredicted RBP6.4□□□□□ -1.38
UBR4-215ENST00000492606 CNTROBQ8N137 903 aa6.4□□□□□ -1.38
UBR4-215ENST00000492606 DEFB123Q8N688 67 aa6.4□□□□□ -1.38
UBR4-215ENST00000492606 P2RX7Q99572 595 aaKnown RBP6.4□□□□□ -1.38
UBR4-215ENST00000492606 CDCA7Q9BWT1 371 aaPredicted RBP6.4□□□□□ -1.38
UBR4-215ENST00000492606 C1orf115Q9H7X2 142 aa6.4□□□□□ -1.38
UBR4-215ENST00000492606 PIM2Q9P1W9 311 aa6.4□□□□□ -1.38
UBR4-215ENST00000492606 CCNL1Q9UK58 526 aaPredicted RBP6.4□□□□□ -1.38
UBR4-215ENST00000492606 CEP162Q5TB80 1403 aa6.4□□□□□ -1.39
UBR4-215ENST00000492606 BDP1A6H8Y1 2624 aa6.4□□□□□ -1.39
UBR4-215ENST00000492606 SLIT3O75094 1523 aa6.4□□□□□ -1.39
UBR4-215ENST00000492606 HTTP42858 3142 aa6.39□□□□□ -1.39
UBR4-215ENST00000492606 ATRXP46100 2492 aa6.39□□□□□ -1.39
UBR4-215ENST00000492606 SCN11AQ9UI33 1791 aa6.39□□□□□ -1.39
UBR4-215ENST00000492606 TRANK1O15050 2925 aa6.39□□□□□ -1.39
UBR4-215ENST00000492606 DDNO94850 711 aaPredicted RBP6.39□□□□□ -1.39
UBR4-215ENST00000492606 SKIV2LQ15477 1246 aaKnown RBP6.39□□□□□ -1.39
UBR4-215ENST00000492606 PROCA1Q8NCQ7 364 aaPredicted RBP6.39□□□□□ -1.39
UBR4-215ENST00000492606 TAF1DQ9H5J8 278 aaPredicted RBP6.39□□□□□ -1.39
UBR4-215ENST00000492606 BCL2L12Q9HB09 334 aa6.39□□□□□ -1.39
UBR4-215ENST00000492606 DDX21Q9NR30 783 aaKnown RBP eCLIP6.39□□□□□ -1.39
UBR4-215ENST00000492606 MTMR10Q9NXD2 777 aa6.39□□□□□ -1.39
UBR4-215ENST00000492606 STK26Q9P289 416 aa6.39□□□□□ -1.39
UBR4-215ENST00000492606 GPRASP1Q5JY77 1395 aa6.39□□□□□ -1.39
UBR4-215ENST00000492606 MMP10P09238 476 aa6.38□□□□□ -1.39
UBR4-215ENST00000492606 CST9Q5W186 159 aa6.38□□□□□ -1.39
UBR4-215ENST00000492606 FLAD1Q8NFF5 587 aa6.38□□□□□ -1.39
UBR4-215ENST00000492606 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.38□□□□□ -1.39
UBR4-215ENST00000492606 TLL2Q9Y6L7 1015 aa6.38□□□□□ -1.39
UBR4-215ENST00000492606 C5P01031 1676 aa6.38□□□□□ -1.39
UBR4-215ENST00000492606 RBBP6Q7Z6E9 1792 aaKnown RBP6.38□□□□□ -1.39
UBR4-215ENST00000492606 UBR3Q6ZT12 1888 aa6.37□□□□□ -1.39
UBR4-215ENST00000492606 TAF1LQ8IZX4 1826 aa6.37□□□□□ -1.39
UBR4-215ENST00000492606 ABCC6O95255 1503 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms