RNA–Protein interactions for RNA: ENST00000491936.5

TMEM50A-205, Transcript of transmembrane protein 50A, humanhuman

TSL 1 (best)

Gene TMEM50A, Length 965 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-205ENST00000491936 TRIM37O94972 964 aa18.77■□□□□ 0.6
TMEM50A-205ENST00000491936 EN1Q05925 392 aaPredicted RBP18.77■□□□□ 0.6
TMEM50A-205ENST00000491936 DDRGK1Q96HY6 314 aa18.77■□□□□ 0.6
TMEM50A-205ENST00000491936 IPO9Q96P70 1041 aaKnown RBP18.77■□□□□ 0.6
TMEM50A-205ENST00000491936 USP16Q9Y5T5 823 aa18.77■□□□□ 0.6
TMEM50A-205ENST00000491936 UTYO14607 1347 aa18.76■□□□□ 0.59
TMEM50A-205ENST00000491936 PAPPAQ13219 1627 aa18.76■□□□□ 0.59
TMEM50A-205ENST00000491936 NEXNQ0ZGT2 675 aa18.76■□□□□ 0.59
TMEM50A-205ENST00000491936 PROSER3Q2NL68 480 aa18.76■□□□□ 0.59
TMEM50A-205ENST00000491936 RAB11FIP3O75154 756 aa18.75■□□□□ 0.59
TMEM50A-205ENST00000491936 ANXA1P04083 346 aa18.75■□□□□ 0.59
TMEM50A-205ENST00000491936 LRP10Q7Z4F1 713 aa18.75■□□□□ 0.59
TMEM50A-205ENST00000491936 RIC3Q7Z5B4 369 aa18.75■□□□□ 0.59
TMEM50A-205ENST00000491936 SSH3Q8TE77 659 aa18.75■□□□□ 0.59
TMEM50A-205ENST00000491936 UPF2Q9HAU5 1272 aaKnown RBP18.75■□□□□ 0.59
TMEM50A-205ENST00000491936 LRRFIP2Q9Y608 721 aaKnown RBP18.75■□□□□ 0.59
TMEM50A-205ENST00000491936 UBR2Q8IWV8 1755 aa18.75■□□□□ 0.59
TMEM50A-205ENST00000491936 LAMB4A4D0S4 1761 aa18.74■□□□□ 0.59
TMEM50A-205ENST00000491936 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
TMEM50A-205ENST00000491936 MTX1Q13505 466 aa18.74■□□□□ 0.59
TMEM50A-205ENST00000491936 POLA2Q14181 598 aa18.74■□□□□ 0.59
TMEM50A-205ENST00000491936 HSP90AB4PQ58FF6 505 aa18.74■□□□□ 0.59
TMEM50A-205ENST00000491936 ANKRD13DQ6ZTN6 518 aa18.74■□□□□ 0.59
TMEM50A-205ENST00000491936 METTL22Q9BUU2 404 aaPredicted RBP18.74■□□□□ 0.59
TMEM50A-205ENST00000491936 SBF2Q86WG5 1849 aa18.74■□□□□ 0.59
TMEM50A-205ENST00000491936 KCPQ6ZWJ8 1503 aa18.74■□□□□ 0.59
TMEM50A-205ENST00000491936 C5P01031 1676 aa18.73■□□□□ 0.59
TMEM50A-205ENST00000491936 COPS6Q7L5N1 327 aa18.73■□□□□ 0.59
TMEM50A-205ENST00000491936 XAGE3Q8WTP9 111 aa18.73■□□□□ 0.59
TMEM50A-205ENST00000491936 C9orf78Q9NZ63 289 aaPredicted RBP18.73■□□□□ 0.59
TMEM50A-205ENST00000491936 DDB1Q16531 1140 aa18.72■□□□□ 0.59
TMEM50A-205ENST00000491936 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
TMEM50A-205ENST00000491936 MYL6BP14649 208 aa18.71■□□□□ 0.59
TMEM50A-205ENST00000491936 EZH2Q15910 746 aaKnown RBP18.71■□□□□ 0.59
TMEM50A-205ENST00000491936 PLEKHM2Q8IWE5 1019 aa18.71■□□□□ 0.59
TMEM50A-205ENST00000491936 CAMKK2Q96RR4 588 aa18.71■□□□□ 0.59
TMEM50A-205ENST00000491936 OSBPL3Q9H4L5 887 aa18.71■□□□□ 0.59
TMEM50A-205ENST00000491936 GRM8O00222 908 aa18.7■□□□□ 0.58
TMEM50A-205ENST00000491936 APBA3O96018 575 aa18.7■□□□□ 0.58
TMEM50A-205ENST00000491936 NBPF7P0C2Y1 421 aaPredicted RBP18.7■□□□□ 0.58
TMEM50A-205ENST00000491936 AIMP1Q12904 312 aaKnown RBP18.7■□□□□ 0.58
TMEM50A-205ENST00000491936 PIGBQ92521 554 aa18.7■□□□□ 0.58
TMEM50A-205ENST00000491936 LRRCC1Q9C099 1032 aa18.7■□□□□ 0.58
TMEM50A-205ENST00000491936 RREB1Q92766 1687 aa18.69■□□□□ 0.58
TMEM50A-205ENST00000491936 COL15A1P39059 1388 aa18.69■□□□□ 0.58
TMEM50A-205ENST00000491936 BCL9O00512 1426 aa18.69■□□□□ 0.58
TMEM50A-205ENST00000491936 POTEHQ6S545 545 aa18.69■□□□□ 0.58
TMEM50A-205ENST00000491936 MARCH10Q8NA82 808 aaPredicted RBP18.69■□□□□ 0.58
TMEM50A-205ENST00000491936 PNMA6EA0A0J9YXQ4 647 aa18.68■□□□□ 0.58
TMEM50A-205ENST00000491936 NEURL1BA8MQ27 555 aa18.68■□□□□ 0.58
TMEM50A-205ENST00000491936 STARD3NLO95772 234 aa18.68■□□□□ 0.58
TMEM50A-205ENST00000491936 PPP1R42Q7Z4L9 355 aa18.68■□□□□ 0.58
TMEM50A-205ENST00000491936 ATG3Q9NT62 314 aa18.68■□□□□ 0.58
TMEM50A-205ENST00000491936 NOP58Q9Y2X3 529 aaKnown RBP18.68■□□□□ 0.58
TMEM50A-205ENST00000491936 PSDA5PKW4 1024 aaPredicted RBP18.67■□□□□ 0.58
TMEM50A-205ENST00000491936 GCKRQ14397 625 aa18.67■□□□□ 0.58
TMEM50A-205ENST00000491936 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
TMEM50A-205ENST00000491936 NUP188Q5SRE5 1749 aa18.66■□□□□ 0.58
TMEM50A-205ENST00000491936 TOGARAM1Q9Y4F4 1720 aa18.66■□□□□ 0.58
TMEM50A-205ENST00000491936 NBPF26B4DH59 902 aa18.66■□□□□ 0.58
TMEM50A-205ENST00000491936 SRGAP3O43295 1099 aa18.66■□□□□ 0.58
TMEM50A-205ENST00000491936 IGKV5-2P06315 115 aa18.66■□□□□ 0.58
TMEM50A-205ENST00000491936 NBPF14Q5TI25 921 aa18.66■□□□□ 0.58
TMEM50A-205ENST00000491936 NBPF10Q6P3W6 841 aaKnown RBP18.66■□□□□ 0.58
TMEM50A-205ENST00000491936 NBPF15Q8N660 670 aa18.66■□□□□ 0.58
TMEM50A-205ENST00000491936 SRCAPQ6ZRS2 3230 aa18.65■□□□□ 0.58
TMEM50A-205ENST00000491936 PTCD1O75127 700 aaKnown RBP18.65■□□□□ 0.58
TMEM50A-205ENST00000491936 TTC22Q5TAA0 569 aa18.65■□□□□ 0.58
TMEM50A-205ENST00000491936 ERC1Q8IUD2 1116 aa18.65■□□□□ 0.58
TMEM50A-205ENST00000491936 AOX1Q06278 1338 aa18.65■□□□□ 0.58
TMEM50A-205ENST00000491936 CWF19L2Q2TBE0 894 aaKnown RBP18.64■□□□□ 0.57
TMEM50A-205ENST00000491936 PTF1AQ7RTS3 328 aa18.64■□□□□ 0.57
TMEM50A-205ENST00000491936 KIF1BPQ96EK5 621 aa18.64■□□□□ 0.57
TMEM50A-205ENST00000491936 MYD88Q99836 296 aa18.64■□□□□ 0.57
TMEM50A-205ENST00000491936 STAP2Q9UGK3 403 aa18.64■□□□□ 0.57
TMEM50A-205ENST00000491936 RGPD3A6NKT7 1758 aaPredicted RBP18.63■□□□□ 0.57
TMEM50A-205ENST00000491936 RGPD4Q7Z3J3 1758 aa18.63■□□□□ 0.57
TMEM50A-205ENST00000491936 CDC45O75419 566 aa18.63■□□□□ 0.57
TMEM50A-205ENST00000491936 SURF6O75683 361 aaKnown RBP18.63■□□□□ 0.57
TMEM50A-205ENST00000491936 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
TMEM50A-205ENST00000491936 EXOC6BQ9Y2D4 811 aa18.63■□□□□ 0.57
TMEM50A-205ENST00000491936 SEC24BO95487 1268 aa18.62■□□□□ 0.57
TMEM50A-205ENST00000491936 A1BGP04217 495 aa18.62■□□□□ 0.57
TMEM50A-205ENST00000491936 TBC1D32Q96NH3 1257 aa18.62■□□□□ 0.57
TMEM50A-205ENST00000491936 LRP5O75197 1615 aa18.62■□□□□ 0.57
TMEM50A-205ENST00000491936 SALL3Q9BXA9 1300 aa18.61■□□□□ 0.57
TMEM50A-205ENST00000491936 PDE1AP54750 535 aa18.61■□□□□ 0.57
TMEM50A-205ENST00000491936 TRIM28Q13263 835 aaKnown RBP18.61■□□□□ 0.57
TMEM50A-205ENST00000491936 R3HDM1Q15032 1099 aaKnown RBP18.61■□□□□ 0.57
TMEM50A-205ENST00000491936 C16orf71Q8IYS4 520 aaPredicted RBP18.61■□□□□ 0.57
TMEM50A-205ENST00000491936 CCDC191Q8NCU4 936 aa18.61■□□□□ 0.57
TMEM50A-205ENST00000491936 BCL11BQ9C0K0 894 aaPredicted RBP18.61■□□□□ 0.57
TMEM50A-205ENST00000491936 SMARCA5O60264 1052 aaPredicted RBP18.6■□□□□ 0.57
TMEM50A-205ENST00000491936 PRIM1P49642 420 aaKnown RBP18.6■□□□□ 0.57
TMEM50A-205ENST00000491936 CASC1Q6TDU7 716 aa18.6■□□□□ 0.57
TMEM50A-205ENST00000491936 RHPN1Q8TCX5 695 aa18.6■□□□□ 0.57
TMEM50A-205ENST00000491936 SUCLG2Q96I99 432 aa18.6■□□□□ 0.57
TMEM50A-205ENST00000491936 ITGB4P16144 1822 aa18.6■□□□□ 0.57
TMEM50A-205ENST00000491936 H7C1W4 665 aa18.59■□□□□ 0.57
TMEM50A-205ENST00000491936 DNAJC10Q8IXB1 793 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms