RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 CCDC144CPQ8IYA2 1237 aa7.61□□□□□ -1.19
CCDC6-202ENST00000491922 TTC14Q96N46 770 aa7.61□□□□□ -1.19
CCDC6-202ENST00000491922 L2HGDHQ9H9P8 463 aa7.61□□□□□ -1.19
CCDC6-202ENST00000491922 MTMR6Q9Y217 621 aa7.61□□□□□ -1.19
CCDC6-202ENST00000491922 MROH1Q8NDA8 1641 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 FYB1O15117 783 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 SKILP12757 684 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 CLCN6P51797 869 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 CERS3Q8IU89 383 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 CNPY4Q8N129 248 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 CCAR2Q8N163 923 aaKnown RBP7.6□□□□□ -1.19
CCDC6-202ENST00000491922 THUMPD2Q9BTF0 503 aaKnown RBP7.6□□□□□ -1.19
CCDC6-202ENST00000491922 AOX1Q06278 1338 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 CDK12Q9NYV4 1490 aaPredicted RBP7.6□□□□□ -1.19
CCDC6-202ENST00000491922 CAMSAP1Q5T5Y3 1602 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 AATKQ6ZMQ8 1374 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 USP27XA6NNY8 438 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 CASQ1P31415 396 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 ZNF165P49910 485 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 AK2P54819 239 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 TMCO3Q6UWJ1 677 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 RILPL2Q969X0 211 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 CLSTN2Q9H4D0 955 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 TERF2IPQ9NYB0 399 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 RIMS2Q9UQ26 1411 aa7.6□□□□□ -1.19
CCDC6-202ENST00000491922 DHX16O60231 1041 aaKnown RBP7.59□□□□□ -1.19
CCDC6-202ENST00000491922 ZRANB2O95218 330 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC6-202ENST00000491922 GJB2P29033 226 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 CAMK4Q16566 473 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 SYT10Q6XYQ8 523 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 KRBA2Q6ZNG9 492 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 RUFY3Q7L099 469 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 GOLGA6L1Q8N7Z2 621 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 ZSCAN31Q96LW9 406 aaPredicted RBP7.59□□□□□ -1.19
CCDC6-202ENST00000491922 MEIS3Q99687 375 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 BRMS1Q9HCU9 246 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 CABP2Q9NPB3 220 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 STAP2Q9UGK3 403 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 TTC21BQ7Z4L5 1316 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 GOLGA6L19H0YKK7 550 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 MYO1CO00159 1063 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 LIG1P18858 919 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 MMP14P50281 582 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 GTF2A1P52655 376 aaPredicted RBP7.59□□□□□ -1.19
CCDC6-202ENST00000491922 ERCC6LQ2NKX8 1250 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC6-202ENST00000491922 TTC6Q86TZ1 520 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 CKAP2LQ8IYA6 745 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC6-202ENST00000491922 NEK11Q8NG66 645 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 PHACTR3Q96KR7 559 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 LRRCC1Q9C099 1032 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 SH2B1Q9NRF2 756 aaPredicted RBP7.59□□□□□ -1.19
CCDC6-202ENST00000491922 POLKQ9UBT6 870 aa7.59□□□□□ -1.19
CCDC6-202ENST00000491922 LRRFIP2Q9Y608 721 aaKnown RBP7.59□□□□□ -1.19
CCDC6-202ENST00000491922 CLTCQ00610 1675 aaKnown RBP7.59□□□□□ -1.19
CCDC6-202ENST00000491922 RPGRIP1LQ68CZ1 1315 aa7.59□□□□□ -1.2
CCDC6-202ENST00000491922 TTC21AQ8NDW8 1320 aa7.59□□□□□ -1.2
CCDC6-202ENST00000491922 GOLGA6L4A6NEF3 574 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 CCDC69A6NI79 296 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 TPM1P09493 284 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 CCZ1BP86790 482 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 CCZ1P86791 482 aaPredicted RBP7.58□□□□□ -1.2
CCDC6-202ENST00000491922 ZSCAN26Q16670 478 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 CCDC93Q567U6 631 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 ICE2Q659A1 982 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 TMEM132EQ6IEE7 984 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 SCAND2PQ9GZW5 306 aaPredicted RBP7.58□□□□□ -1.2
CCDC6-202ENST00000491922 DACT1Q9NYF0 836 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 SNX14Q9Y5W7 946 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 ATP7AQ04656 1500 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 LMTK2Q8IWU2 1503 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 NPHP3Q7Z494 1330 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 PREX1Q8TCU6 1659 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 ADGRL3Q9HAR2 1447 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 CD163L1Q9NR16 1453 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 ARAP3Q8WWN8 1544 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 CHD2O14647 1828 aaKnown RBP7.58□□□□□ -1.2
CCDC6-202ENST00000491922 VPS37CA5D8V6 355 aaPredicted RBP7.58□□□□□ -1.2
CCDC6-202ENST00000491922 GSDMDP57764 484 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 SNW1Q13573 536 aaKnown RBP7.58□□□□□ -1.2
CCDC6-202ENST00000491922 ARHGAP29Q52LW3 1261 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 NFATC2IPQ8NCF5 419 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 CCDC191Q8NCU4 936 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 GOLGA5Q8TBA6 731 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 AK7Q96M32 723 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 UBXN6Q9BZV1 441 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 FBXO3Q9UK99 471 aa7.58□□□□□ -1.2
CCDC6-202ENST00000491922 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.58□□□□□ -1.2
CCDC6-202ENST00000491922 ABCC3O15438 1527 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 DHX8Q14562 1220 aaKnown RBP7.57□□□□□ -1.2
CCDC6-202ENST00000491922 NOM1Q5C9Z4 860 aaKnown RBP7.57□□□□□ -1.2
CCDC6-202ENST00000491922 CERKQ8TCT0 537 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 SLC26A8Q96RN1 970 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 DNAJC25Q9H1X3 360 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 PSD3Q9NYI0 1048 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 NPHP1O15259 732 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 POLR3GO15318 223 aaPredicted RBP7.57□□□□□ -1.2
CCDC6-202ENST00000491922 PDCP20941 246 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 KCNJ6P48051 423 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms