RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 LRP10Q7Z4F1 713 aa16.69■□□□□ 0.26
SEC61A1-206ENST00000491668 CNBD1Q8NA66 436 aa16.69■□□□□ 0.26
SEC61A1-206ENST00000491668 RUNDC1Q96C34 613 aa16.69■□□□□ 0.26
SEC61A1-206ENST00000491668 TSPYL4Q9UJ04 414 aa16.69■□□□□ 0.26
SEC61A1-206ENST00000491668 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
SEC61A1-206ENST00000491668 TTLL7Q6ZT98 887 aa16.68■□□□□ 0.26
SEC61A1-206ENST00000491668 TTLL6Q8N841 843 aa16.68■□□□□ 0.26
SEC61A1-206ENST00000491668 KIF3CO14782 793 aa16.67■□□□□ 0.26
SEC61A1-206ENST00000491668 PDE6BP35913 854 aa16.67■□□□□ 0.26
SEC61A1-206ENST00000491668 RASSF7Q02833 373 aa16.67■□□□□ 0.26
SEC61A1-206ENST00000491668 WDR43Q15061 677 aaKnown RBP eCLIP16.67■□□□□ 0.26
SEC61A1-206ENST00000491668 PDIA6Q15084 440 aa16.67■□□□□ 0.26
SEC61A1-206ENST00000491668 NGEFQ8N5V2 710 aa16.67■□□□□ 0.26
SEC61A1-206ENST00000491668 CHL1O00533 1208 aa16.66■□□□□ 0.26
SEC61A1-206ENST00000491668 MYL6BP14649 208 aa16.66■□□□□ 0.26
SEC61A1-206ENST00000491668 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
SEC61A1-206ENST00000491668 KRT24Q2M2I5 525 aa16.66■□□□□ 0.26
SEC61A1-206ENST00000491668 PROSER3Q2NL68 480 aa16.66■□□□□ 0.26
SEC61A1-206ENST00000491668 CCDC184Q52MB2 194 aa16.66■□□□□ 0.26
SEC61A1-206ENST00000491668 NBPF5PQ86XG9 351 aaPredicted RBP16.66■□□□□ 0.26
SEC61A1-206ENST00000491668 BABAM1Q9NWV8 329 aa16.66■□□□□ 0.26
SEC61A1-206ENST00000491668 NIP7Q9Y221 180 aaKnown RBP eCLIP16.66■□□□□ 0.26
SEC61A1-206ENST00000491668 ZNF652Q9Y2D9 606 aa16.66■□□□□ 0.26
SEC61A1-206ENST00000491668 NFKBIEO00221 500 aa16.65■□□□□ 0.26
SEC61A1-206ENST00000491668 SRGNP10124 158 aa16.65■□□□□ 0.26
SEC61A1-206ENST00000491668 ZNF622Q969S3 477 aaKnown RBP eCLIP16.65■□□□□ 0.26
SEC61A1-206ENST00000491668 NUP98P52948 1817 aa16.65■□□□□ 0.26
SEC61A1-206ENST00000491668 SLX4Q8IY92 1834 aa16.65■□□□□ 0.26
SEC61A1-206ENST00000491668 MAP3K15Q6ZN16 1313 aa16.65■□□□□ 0.26
SEC61A1-206ENST00000491668 KLRG2A4D1S0 409 aaPredicted RBP16.64■□□□□ 0.25
SEC61A1-206ENST00000491668 ERVV-1B6SEH8 477 aa16.64■□□□□ 0.25
SEC61A1-206ENST00000491668 RNF181Q9P0P0 153 aa16.64■□□□□ 0.25
SEC61A1-206ENST00000491668 PDZRN3Q9UPQ7 1066 aa16.64■□□□□ 0.25
SEC61A1-206ENST00000491668 ERBB4Q15303 1308 aa16.64■□□□□ 0.25
SEC61A1-206ENST00000491668 ANXA1P04083 346 aa16.63■□□□□ 0.25
SEC61A1-206ENST00000491668 ST5P78524 1137 aa16.63■□□□□ 0.25
SEC61A1-206ENST00000491668 STYK1Q6J9G0 422 aa16.63■□□□□ 0.25
SEC61A1-206ENST00000491668 ZBTB3Q9H5J0 574 aa16.63■□□□□ 0.25
SEC61A1-206ENST00000491668 NMRK2Q9NPI5 230 aa16.63■□□□□ 0.25
SEC61A1-206ENST00000491668 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
SEC61A1-206ENST00000491668 SENP3-EIF4A1A0A087X0R7 540 aa16.62■□□□□ 0.25
SEC61A1-206ENST00000491668 FAM177BA6PVY3 158 aa16.62■□□□□ 0.25
SEC61A1-206ENST00000491668 C21orf2O43822 256 aa16.62■□□□□ 0.25
SEC61A1-206ENST00000491668 EIF2S2P20042 333 aaKnown RBP16.62■□□□□ 0.25
SEC61A1-206ENST00000491668 TPTE2Q6XPS3 522 aa16.62■□□□□ 0.25
SEC61A1-206ENST00000491668 UBN2Q6ZU65 1347 aa16.62■□□□□ 0.25
SEC61A1-206ENST00000491668 ABCC12Q96J65 1359 aa16.62■□□□□ 0.25
SEC61A1-206ENST00000491668 ARFGEF2Q9Y6D5 1785 aa16.61■□□□□ 0.25
SEC61A1-206ENST00000491668 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
SEC61A1-206ENST00000491668 PRPF40BQ6NWY9 871 aaKnown RBP16.61■□□□□ 0.25
SEC61A1-206ENST00000491668 C7orf43Q8WVR3 580 aa16.61■□□□□ 0.25
SEC61A1-206ENST00000491668 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
SEC61A1-206ENST00000491668 CACNA1SQ13698 1873 aa16.61■□□□□ 0.25
SEC61A1-206ENST00000491668 APAF1O14727 1248 aa16.6■□□□□ 0.25
SEC61A1-206ENST00000491668 NPHP1O15259 732 aa16.6■□□□□ 0.25
SEC61A1-206ENST00000491668 LMNB1P20700 586 aa16.6■□□□□ 0.25
SEC61A1-206ENST00000491668 GPTP24298 496 aa16.6■□□□□ 0.25
SEC61A1-206ENST00000491668 KIF6Q6ZMV9 814 aa16.6■□□□□ 0.25
SEC61A1-206ENST00000491668 ZNF34Q8IZ26 560 aa16.6■□□□□ 0.25
SEC61A1-206ENST00000491668 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
SEC61A1-206ENST00000491668 MASTLQ96GX5 879 aa16.6■□□□□ 0.25
SEC61A1-206ENST00000491668 LAS1LQ9Y4W2 734 aaKnown RBP16.6■□□□□ 0.25
SEC61A1-206ENST00000491668 CCDC88AQ3V6T2 1871 aa16.6■□□□□ 0.25
SEC61A1-206ENST00000491668 ZNF853P0CG23 659 aa16.59■□□□□ 0.25
SEC61A1-206ENST00000491668 SUSD4Q5VX71 490 aa16.59■□□□□ 0.25
SEC61A1-206ENST00000491668 NUTM1Q86Y26 1132 aa16.59■□□□□ 0.25
SEC61A1-206ENST00000491668 CNKSR1Q969H4 720 aa16.59■□□□□ 0.25
SEC61A1-206ENST00000491668 NPR1P16066 1061 aa16.58■□□□□ 0.24
SEC61A1-206ENST00000491668 ERFEQ4G0M1 354 aa16.58■□□□□ 0.24
SEC61A1-206ENST00000491668 GIGYF2Q6Y7W6 1299 aaKnown RBP16.58■□□□□ 0.24
SEC61A1-206ENST00000491668 CFAP44Q96MT7 982 aa16.58■□□□□ 0.24
SEC61A1-206ENST00000491668 TIAM2Q8IVF5 1701 aa16.57■□□□□ 0.24
SEC61A1-206ENST00000491668 CRY2Q49AN0 593 aa16.57■□□□□ 0.24
SEC61A1-206ENST00000491668 OLFM4Q6UX06 510 aa16.57■□□□□ 0.24
SEC61A1-206ENST00000491668 MBIPQ9NS73 344 aa16.57■□□□□ 0.24
SEC61A1-206ENST00000491668 IBTKQ9P2D0 1353 aaPredicted RBP16.56■□□□□ 0.24
SEC61A1-206ENST00000491668 LTBP3Q9NS15 1303 aa16.56■□□□□ 0.24
SEC61A1-206ENST00000491668 ZC3H4Q9UPT8 1303 aaKnown RBP16.56■□□□□ 0.24
SEC61A1-206ENST00000491668 NTSR2O95665 410 aa16.56■□□□□ 0.24
SEC61A1-206ENST00000491668 C3orf67Q6ZVT6 689 aa16.56■□□□□ 0.24
SEC61A1-206ENST00000491668 COPS6Q7L5N1 327 aa16.56■□□□□ 0.24
SEC61A1-206ENST00000491668 XAGE3Q8WTP9 111 aa16.56■□□□□ 0.24
SEC61A1-206ENST00000491668 CHPF2Q9P2E5 772 aa16.56■□□□□ 0.24
SEC61A1-206ENST00000491668 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
SEC61A1-206ENST00000491668 SLC51AQ86UW1 340 aa16.55■□□□□ 0.24
SEC61A1-206ENST00000491668 NYXQ9GZU5 481 aa16.55■□□□□ 0.24
SEC61A1-206ENST00000491668 DDX21Q9NR30 783 aaKnown RBP eCLIP16.55■□□□□ 0.24
SEC61A1-206ENST00000491668 DICER1Q9UPY3 1922 aaKnown RBP16.55■□□□□ 0.24
SEC61A1-206ENST00000491668 SNED1Q8TER0 1413 aa16.54■□□□□ 0.24
SEC61A1-206ENST00000491668 KDM2BQ8NHM5 1336 aa16.54■□□□□ 0.24
SEC61A1-206ENST00000491668 TOMM70O94826 608 aa16.54■□□□□ 0.24
SEC61A1-206ENST00000491668 TAOK3Q9H2K8 898 aa16.54■□□□□ 0.24
SEC61A1-206ENST00000491668 RRAGCQ9HB90 399 aa16.54■□□□□ 0.24
SEC61A1-206ENST00000491668 HOXB7P09629 217 aa16.53■□□□□ 0.24
SEC61A1-206ENST00000491668 HSPA6P17066 643 aa16.53■□□□□ 0.24
SEC61A1-206ENST00000491668 GTF2E1P29083 439 aaPredicted RBP16.53■□□□□ 0.24
SEC61A1-206ENST00000491668 AIMP1Q12904 312 aaKnown RBP16.53■□□□□ 0.24
SEC61A1-206ENST00000491668 HDGFL1Q5TGJ6 251 aa16.53■□□□□ 0.24
SEC61A1-206ENST00000491668 DUSP27Q5VZP5 1158 aa16.53■□□□□ 0.24
SEC61A1-206ENST00000491668 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms