RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
PCOLCE-209ENST00000490909 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
PCOLCE-209ENST00000490909 PRPF40BQ6NWY9 871 aaKnown RBP11.34□□□□□ -0.59
PCOLCE-209ENST00000490909 CNBD1Q8NA66 436 aa11.34□□□□□ -0.59
PCOLCE-209ENST00000490909 ZNF622Q969S3 477 aaKnown RBP eCLIP11.34□□□□□ -0.59
PCOLCE-209ENST00000490909 LAMB2P55268 1798 aa11.33□□□□□ -0.59
PCOLCE-209ENST00000490909 ABCC12Q96J65 1359 aa11.33□□□□□ -0.6
PCOLCE-209ENST00000490909 SRGNP10124 158 aa11.33□□□□□ -0.6
PCOLCE-209ENST00000490909 VEGFAP15692 232 aaPredicted RBP11.33□□□□□ -0.6
PCOLCE-209ENST00000490909 MCM10Q7L590 875 aa11.33□□□□□ -0.6
PCOLCE-209ENST00000490909 DZIP3Q86Y13 1208 aaKnown RBP11.33□□□□□ -0.6
PCOLCE-209ENST00000490909 USP16Q9Y5T5 823 aa11.33□□□□□ -0.6
PCOLCE-209ENST00000490909 ANKRD36CQ5JPF3 1778 aa11.33□□□□□ -0.6
PCOLCE-209ENST00000490909 THSD7BQ9C0I4 1608 aa11.32□□□□□ -0.6
PCOLCE-209ENST00000490909 BTBD11A6QL63 1104 aa11.32□□□□□ -0.6
PCOLCE-209ENST00000490909 NBPF26B4DH59 902 aa11.32□□□□□ -0.6
PCOLCE-209ENST00000490909 PDE6BP35913 854 aa11.32□□□□□ -0.6
PCOLCE-209ENST00000490909 NBPF10Q6P3W6 841 aaKnown RBP11.32□□□□□ -0.6
PCOLCE-209ENST00000490909 NBPF15Q8N660 670 aa11.32□□□□□ -0.6
PCOLCE-209ENST00000490909 TAOK3Q9H2K8 898 aa11.32□□□□□ -0.6
PCOLCE-209ENST00000490909 DCTN1Q14203 1278 aa11.31□□□□□ -0.6
PCOLCE-209ENST00000490909 STYK1Q6J9G0 422 aa11.31□□□□□ -0.6
PCOLCE-209ENST00000490909 OLFM4Q6UX06 510 aa11.31□□□□□ -0.6
PCOLCE-209ENST00000490909 SLC51AQ86UW1 340 aa11.31□□□□□ -0.6
PCOLCE-209ENST00000490909 C7orf43Q8WVR3 580 aa11.31□□□□□ -0.6
PCOLCE-209ENST00000490909 TEX13AQ9BXU3 409 aaPredicted RBP11.31□□□□□ -0.6
PCOLCE-209ENST00000490909 ZNF541Q9H0D2 1346 aa11.31□□□□□ -0.6
PCOLCE-209ENST00000490909 PPP2R1AP30153 589 aa11.3□□□□□ -0.6
PCOLCE-209ENST00000490909 ERFEQ4G0M1 354 aa11.3□□□□□ -0.6
PCOLCE-209ENST00000490909 SETDB2Q96T68 719 aa11.3□□□□□ -0.6
PCOLCE-209ENST00000490909 DDNO94850 711 aaPredicted RBP11.29□□□□□ -0.6
PCOLCE-209ENST00000490909 HSPA1AP0DMV8 641 aaKnown RBP11.29□□□□□ -0.6
PCOLCE-209ENST00000490909 HSPA1BP0DMV9 641 aaKnown RBP11.29□□□□□ -0.6
PCOLCE-209ENST00000490909 ST5P78524 1137 aa11.29□□□□□ -0.6
PCOLCE-209ENST00000490909 MASTLQ96GX5 879 aa11.29□□□□□ -0.6
PCOLCE-209ENST00000490909 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
PCOLCE-209ENST00000490909 RIC1Q4ADV7 1423 aa11.28□□□□□ -0.6
PCOLCE-209ENST00000490909 KLRG2A4D1S0 409 aaPredicted RBP11.28□□□□□ -0.6
PCOLCE-209ENST00000490909 U2AF1L5P0DN76 240 aaPredicted RBP11.28□□□□□ -0.6
PCOLCE-209ENST00000490909 U2AF1Q01081 240 aaKnown RBP eCLIP11.28□□□□□ -0.6
PCOLCE-209ENST00000490909 CNKSR1Q969H4 720 aa11.28□□□□□ -0.6
PCOLCE-209ENST00000490909 L3MBTL3Q96JM7 780 aaPredicted RBP11.28□□□□□ -0.6
PCOLCE-209ENST00000490909 SNRPA1P09661 255 aaKnown RBP11.27□□□□□ -0.61
PCOLCE-209ENST00000490909 HLFQ16534 295 aa11.27□□□□□ -0.61
PCOLCE-209ENST00000490909 CLEC4GQ6UXB4 293 aa11.27□□□□□ -0.61
PCOLCE-209ENST00000490909 NBPF5PQ86XG9 351 aaPredicted RBP11.27□□□□□ -0.61
PCOLCE-209ENST00000490909 CFAP53Q96M91 514 aa11.27□□□□□ -0.61
PCOLCE-209ENST00000490909 PASKQ96RG2 1323 aa11.27□□□□□ -0.61
PCOLCE-209ENST00000490909 ZNF316A6NFI3 1004 aaPredicted RBP11.26□□□□□ -0.61
PCOLCE-209ENST00000490909 CCDC93Q567U6 631 aa11.26□□□□□ -0.61
PCOLCE-209ENST00000490909 CHADLQ6NUI6 762 aa11.26□□□□□ -0.61
PCOLCE-209ENST00000490909 NIP7Q9Y221 180 aaKnown RBP eCLIP11.26□□□□□ -0.61
PCOLCE-209ENST00000490909 UBN2Q6ZU65 1347 aa11.26□□□□□ -0.61
PCOLCE-209ENST00000490909 CNTNAP1P78357 1384 aa11.26□□□□□ -0.61
PCOLCE-209ENST00000490909 LRRC37AA6NMS7 1700 aa11.26□□□□□ -0.61
PCOLCE-209ENST00000490909 TAF1P21675 1872 aa11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 RGL2O15211 777 aa11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 NPHP1O15259 732 aa11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 NPR1P16066 1061 aa11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 FKBP4Q02790 459 aaKnown RBP eCLIP11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 CRY2Q49AN0 593 aa11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 ZNF277Q9NRM2 450 aaPredicted RBP11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 MIS18AQ9NYP9 233 aa11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 MKRN1Q9UHC7 482 aaKnown RBP11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 ZNF652Q9Y2D9 606 aa11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 DDX60Q8IY21 1712 aaKnown RBP11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 IBTKQ9P2D0 1353 aaPredicted RBP11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 TRPM7Q96QT4 1865 aa11.25□□□□□ -0.61
PCOLCE-209ENST00000490909 DUOX1Q9NRD9 1551 aa11.24□□□□□ -0.61
PCOLCE-209ENST00000490909 COL4A1P02462 1669 aa11.24□□□□□ -0.61
PCOLCE-209ENST00000490909 FAM177BA6PVY3 158 aa11.24□□□□□ -0.61
PCOLCE-209ENST00000490909 CAPN15O75808 1086 aa11.24□□□□□ -0.61
PCOLCE-209ENST00000490909 SOGA3Q5TF21 947 aa11.24□□□□□ -0.61
PCOLCE-209ENST00000490909 TNS4Q8IZW8 715 aa11.24□□□□□ -0.61
PCOLCE-209ENST00000490909 RTF1Q92541 710 aaKnown RBP11.24□□□□□ -0.61
PCOLCE-209ENST00000490909 THUMPD2Q9BTF0 503 aaKnown RBP11.24□□□□□ -0.61
PCOLCE-209ENST00000490909 TAF1DQ9H5J8 278 aaPredicted RBP11.24□□□□□ -0.61
PCOLCE-209ENST00000490909 RNF123Q5XPI4 1314 aa11.24□□□□□ -0.61
PCOLCE-209ENST00000490909 NPM2Q86SE8 214 aaKnown RBP11.23□□□□□ -0.61
PCOLCE-209ENST00000490909 LDHDQ86WU2 507 aa11.23□□□□□ -0.61
PCOLCE-209ENST00000490909 NUTM1Q86Y26 1132 aa11.23□□□□□ -0.61
PCOLCE-209ENST00000490909 PLEKHF1Q96S99 279 aa11.23□□□□□ -0.61
PCOLCE-209ENST00000490909 NUDCQ9Y266 331 aa11.23□□□□□ -0.61
PCOLCE-209ENST00000490909 HTATSF1O43719 755 aaKnown RBP11.22□□□□□ -0.61
PCOLCE-209ENST00000490909 ITGBL1O95965 494 aaPredicted RBP11.22□□□□□ -0.61
PCOLCE-209ENST00000490909 MAP3K15Q6ZN16 1313 aa11.22□□□□□ -0.61
PCOLCE-209ENST00000490909 TTLL7Q6ZT98 887 aa11.22□□□□□ -0.61
PCOLCE-209ENST00000490909 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
PCOLCE-209ENST00000490909 IQCA1LA6NCM1 817 aa11.21□□□□□ -0.61
PCOLCE-209ENST00000490909 FZD9O00144 591 aa11.21□□□□□ -0.61
PCOLCE-209ENST00000490909 FOXN1O15353 648 aa11.21□□□□□ -0.61
PCOLCE-209ENST00000490909 IARSP41252 1262 aaKnown RBP11.21□□□□□ -0.61
PCOLCE-209ENST00000490909 EIF4A1P60842 406 aaKnown RBP11.21□□□□□ -0.61
PCOLCE-209ENST00000490909 TAF7Q15545 349 aaPredicted RBP11.21□□□□□ -0.61
PCOLCE-209ENST00000490909 LRP10Q7Z4F1 713 aa11.21□□□□□ -0.61
PCOLCE-209ENST00000490909 NTSR2O95665 410 aa11.2□□□□□ -0.62
PCOLCE-209ENST00000490909 EPHX2P34913 555 aa11.2□□□□□ -0.62
PCOLCE-209ENST00000490909 EAPPQ56P03 285 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms