RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 PES1O00541 588 aaKnown RBP13.5□□□□□ -0.25
PCSK9-202ENST00000490692 CLASRPQ8N2M8 674 aaKnown RBP13.5□□□□□ -0.25
PCSK9-202ENST00000490692 ERCC4Q92889 916 aaPredicted RBP13.5□□□□□ -0.25
PCSK9-202ENST00000490692 C9orf78Q9NZ63 289 aaPredicted RBP13.5□□□□□ -0.25
PCSK9-202ENST00000490692 IL16Q14005 1332 aa13.5□□□□□ -0.25
PCSK9-202ENST00000490692 CHMLP26374 656 aa13.5□□□□□ -0.25
PCSK9-202ENST00000490692 ARHGAP45Q92619 1136 aa13.5□□□□□ -0.25
PCSK9-202ENST00000490692 PPP6R1Q9UPN7 881 aa13.5□□□□□ -0.25
PCSK9-202ENST00000490692 H0YHG0 523 aa13.5□□□□□ -0.25
PCSK9-202ENST00000490692 PHACTR2O75167 634 aa13.5□□□□□ -0.25
PCSK9-202ENST00000490692 LIG1P18858 919 aa13.5□□□□□ -0.25
PCSK9-202ENST00000490692 ZNF75DP51815 510 aa13.5□□□□□ -0.25
PCSK9-202ENST00000490692 HSP90AA4PQ58FG1 418 aa13.5□□□□□ -0.25
PCSK9-202ENST00000490692 DDX19AQ9NUU7 478 aaKnown RBP13.5□□□□□ -0.25
PCSK9-202ENST00000490692 EIF2AK4Q9P2K8 1649 aaKnown RBP13.5□□□□□ -0.25
PCSK9-202ENST00000490692 ERO1AQ96HE7 468 aa13.49□□□□□ -0.25
PCSK9-202ENST00000490692 CTNNA3Q9UI47 895 aa13.49□□□□□ -0.25
PCSK9-202ENST00000490692 A0A087WWV3 80 aa13.49□□□□□ -0.25
PCSK9-202ENST00000490692 CCT4P50991 539 aaKnown RBP13.49□□□□□ -0.25
PCSK9-202ENST00000490692 CFAP100Q494V2 611 aa13.49□□□□□ -0.25
PCSK9-202ENST00000490692 CLEC17AQ6ZS10 378 aa13.49□□□□□ -0.25
PCSK9-202ENST00000490692 CLTCL1P53675 1640 aa13.49□□□□□ -0.25
PCSK9-202ENST00000490692 HNRNPH2P55795 449 aaKnown RBP13.49□□□□□ -0.25
PCSK9-202ENST00000490692 SETQ01105 290 aaPredicted RBP13.49□□□□□ -0.25
PCSK9-202ENST00000490692 TXLNBQ8N3L3 684 aa13.49□□□□□ -0.25
PCSK9-202ENST00000490692 PRDM15P57071 1507 aaPredicted RBP13.49□□□□□ -0.25
PCSK9-202ENST00000490692 CYP2E1P05181 493 aaPredicted RBP13.48□□□□□ -0.25
PCSK9-202ENST00000490692 PSMA5P28066 241 aa13.48□□□□□ -0.25
PCSK9-202ENST00000490692 AOPEPQ8N6M6 819 aa13.48□□□□□ -0.25
PCSK9-202ENST00000490692 CACTINQ8WUQ7 758 aaKnown RBP13.48□□□□□ -0.25
PCSK9-202ENST00000490692 ZSCAN31Q96LW9 406 aaPredicted RBP13.48□□□□□ -0.25
PCSK9-202ENST00000490692 DDX41Q9UJV9 622 aaKnown RBP13.48□□□□□ -0.25
PCSK9-202ENST00000490692 KIF2AO00139 706 aaPredicted RBP13.48□□□□□ -0.25
PCSK9-202ENST00000490692 ARID5BQ14865 1188 aa13.48□□□□□ -0.25
PCSK9-202ENST00000490692 FBXO38Q6PIJ6 1188 aa13.48□□□□□ -0.25
PCSK9-202ENST00000490692 KCNG1Q9UIX4 513 aa13.48□□□□□ -0.25
PCSK9-202ENST00000490692 STK38Q15208 465 aa13.47□□□□□ -0.25
PCSK9-202ENST00000490692 AXDND1Q5T1B0 1012 aaPredicted RBP13.47□□□□□ -0.25
PCSK9-202ENST00000490692 NPC1L1Q9UHC9 1359 aa13.47□□□□□ -0.25
PCSK9-202ENST00000490692 FYB1O15117 783 aa13.47□□□□□ -0.25
PCSK9-202ENST00000490692 KCNF1Q9H3M0 494 aa13.47□□□□□ -0.25
PCSK9-202ENST00000490692 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
PCSK9-202ENST00000490692 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.47□□□□□ -0.256e-6■■■□□ 14.6
PCSK9-202ENST00000490692 DRC1Q96MC2 740 aa13.47□□□□□ -0.25
PCSK9-202ENST00000490692 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
PCSK9-202ENST00000490692 TRPM2O94759 1503 aa13.47□□□□□ -0.25
PCSK9-202ENST00000490692 NCOA3Q9Y6Q9 1424 aa13.47□□□□□ -0.25
PCSK9-202ENST00000490692 AMPHP49418 695 aa13.46□□□□□ -0.25
PCSK9-202ENST00000490692 ANAPC15P60006 121 aa13.46□□□□□ -0.25
PCSK9-202ENST00000490692 PTPRTO14522 1441 aa13.46□□□□□ -0.25
PCSK9-202ENST00000490692 CAPN2P17655 700 aa13.46□□□□□ -0.25
PCSK9-202ENST00000490692 HDGFP51858 240 aaKnown RBP13.46□□□□□ -0.25
PCSK9-202ENST00000490692 C14orf93Q9H972 538 aaKnown RBP13.46□□□□□ -0.25
PCSK9-202ENST00000490692 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
PCSK9-202ENST00000490692 NPATQ14207 1427 aa13.46□□□□□ -0.25
PCSK9-202ENST00000490692 NEMFO60524 1076 aa13.46□□□□□ -0.26
PCSK9-202ENST00000490692 GNG11P61952 73 aa13.46□□□□□ -0.26
PCSK9-202ENST00000490692 ANO10Q9NW15 660 aa13.46□□□□□ -0.26
PCSK9-202ENST00000490692 KMT5BQ4FZB7 885 aa13.45□□□□□ -0.26
PCSK9-202ENST00000490692 SYNE3Q6ZMZ3 975 aa13.45□□□□□ -0.26
PCSK9-202ENST00000490692 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
PCSK9-202ENST00000490692 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
PCSK9-202ENST00000490692 SPTLC3Q9NUV7 552 aa13.45□□□□□ -0.26
PCSK9-202ENST00000490692 CFAP45Q9UL16 551 aa13.45□□□□□ -0.26
PCSK9-202ENST00000490692 CCAR1Q8IX12 1150 aaKnown RBP13.45□□□□□ -0.26
PCSK9-202ENST00000490692 LRRC2Q9BYS8 371 aa13.45□□□□□ -0.26
PCSK9-202ENST00000490692 ARFGAP3Q9NP61 516 aa13.45□□□□□ -0.26
PCSK9-202ENST00000490692 STX1AQ16623 288 aa13.44□□□□□ -0.26
PCSK9-202ENST00000490692 NOC3LQ8WTT2 800 aaKnown RBP13.44□□□□□ -0.26
PCSK9-202ENST00000490692 RBM33Q96EV2 1170 aaKnown RBP13.44□□□□□ -0.26
PCSK9-202ENST00000490692 CPLX1O14810 134 aa13.44□□□□□ -0.26
PCSK9-202ENST00000490692 CARD6Q9BX69 1037 aa13.44□□□□□ -0.26
PCSK9-202ENST00000490692 SH2B1Q9NRF2 756 aaPredicted RBP13.44□□□□□ -0.26
PCSK9-202ENST00000490692 VPS18Q9P253 973 aa13.44□□□□□ -0.26
PCSK9-202ENST00000490692 POGZQ7Z3K3 1410 aa13.44□□□□□ -0.26
PCSK9-202ENST00000490692 LMOD1P29536 600 aaPredicted RBP13.44□□□□□ -0.26
PCSK9-202ENST00000490692 ZSCAN26Q16670 478 aa13.44□□□□□ -0.26
PCSK9-202ENST00000490692 SRRTQ9BXP5 876 aaKnown RBP13.44□□□□□ -0.26
PCSK9-202ENST00000490692 SEC31AO94979 1220 aaKnown RBP13.43□□□□□ -0.26
PCSK9-202ENST00000490692 G3BP1Q13283 466 aaKnown RBP eCLIP13.43□□□□□ -0.26
PCSK9-202ENST00000490692 OAS2P29728 719 aaKnown RBP13.43□□□□□ -0.26
PCSK9-202ENST00000490692 TMED8Q6PL24 325 aaPredicted RBP13.43□□□□□ -0.26
PCSK9-202ENST00000490692 TTC6Q86TZ1 520 aa13.43□□□□□ -0.26
PCSK9-202ENST00000490692 MSH6P52701 1360 aa13.43□□□□□ -0.26
PCSK9-202ENST00000490692 ATP2B1P20020 1258 aa13.43□□□□□ -0.26
PCSK9-202ENST00000490692 CDC37L1Q7L3B6 337 aa13.43□□□□□ -0.26
PCSK9-202ENST00000490692 NME9Q86XW9 330 aa13.43□□□□□ -0.26
PCSK9-202ENST00000490692 ANKRD65E5RJM6 399 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 GYS2P54840 703 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 EVCP57679 992 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 TEFQ10587 303 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 SPHKAPQ2M3C7 1700 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 AACSQ86V21 672 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 ABCA9Q8IUA7 1624 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 YEATS2Q9ULM3 1422 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 CCP110O43303 1012 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 CASQ1P31415 396 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 GSDMDP57764 484 aa13.42□□□□□ -0.26
PCSK9-202ENST00000490692 CCT2P78371 535 aaKnown RBP13.42□□□□□ -0.26
PCSK9-202ENST00000490692 HSP90AB3PQ58FF7 597 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms