RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 SMC1BQ8NDV3 1235 aa20.83■□□□□ 0.93
NUP58-213ENST00000490231 CNKSR1Q969H4 720 aa20.83■□□□□ 0.93
NUP58-213ENST00000490231 COL11A2P13942 1736 aaPredicted RBP20.82■□□□□ 0.92
NUP58-213ENST00000490231 NEFMP07197 916 aa20.82■□□□□ 0.92
NUP58-213ENST00000490231 SRGNP10124 158 aa20.82■□□□□ 0.92
NUP58-213ENST00000490231 LTBP3Q9NS15 1303 aa20.81■□□□□ 0.92
NUP58-213ENST00000490231 NBPF26B4DH59 902 aa20.81■□□□□ 0.92
NUP58-213ENST00000490231 NBPF10Q6P3W6 841 aaKnown RBP20.81■□□□□ 0.92
NUP58-213ENST00000490231 NBPF5PQ86XG9 351 aaPredicted RBP20.81■□□□□ 0.92
NUP58-213ENST00000490231 NBPF15Q8N660 670 aa20.81■□□□□ 0.92
NUP58-213ENST00000490231 MASTLQ96GX5 879 aa20.81■□□□□ 0.92
NUP58-213ENST00000490231 WDR90Q96KV7 1748 aa20.81■□□□□ 0.92
NUP58-213ENST00000490231 SOGA3Q5TF21 947 aa20.8■□□□□ 0.92
NUP58-213ENST00000490231 DPY19L2Q6NUT2 758 aa20.8■□□□□ 0.92
NUP58-213ENST00000490231 PNISRQ8TF01 805 aaKnown RBP20.8■□□□□ 0.92
NUP58-213ENST00000490231 ZNF219Q9P2Y4 722 aaPredicted RBP20.8■□□□□ 0.92
NUP58-213ENST00000490231 TIAM2Q8IVF5 1701 aa20.8■□□□□ 0.92
NUP58-213ENST00000490231 PRPF40BQ6NWY9 871 aaKnown RBP20.79■□□□□ 0.92
NUP58-213ENST00000490231 PLEKHF1Q96S99 279 aa20.79■□□□□ 0.92
NUP58-213ENST00000490231 TAOK3Q9H2K8 898 aa20.79■□□□□ 0.92
NUP58-213ENST00000490231 KLRG2A4D1S0 409 aaPredicted RBP20.78■□□□□ 0.92
NUP58-213ENST00000490231 ERFEQ4G0M1 354 aa20.78■□□□□ 0.92
NUP58-213ENST00000490231 TPTE2Q6XPS3 522 aa20.78■□□□□ 0.92
NUP58-213ENST00000490231 KLRG1Q96E93 195 aa20.77■□□□□ 0.92
NUP58-213ENST00000490231 MIS18AQ9NYP9 233 aa20.77■□□□□ 0.92
NUP58-213ENST00000490231 NIP7Q9Y221 180 aaKnown RBP eCLIP20.77■□□□□ 0.92
NUP58-213ENST00000490231 FER1L6Q2WGJ9 1857 aa20.76■□□□□ 0.91
NUP58-213ENST00000490231 POTECB2RU33 542 aa20.76■□□□□ 0.91
NUP58-213ENST00000490231 HTRA3P83110 453 aa20.76■□□□□ 0.91
NUP58-213ENST00000490231 PNNQ9H307 717 aaKnown RBP20.76■□□□□ 0.91
NUP58-213ENST00000490231 NPR1P16066 1061 aa20.75■□□□□ 0.91
NUP58-213ENST00000490231 NFE2L2Q16236 605 aa20.75■□□□□ 0.91
NUP58-213ENST00000490231 C7orf43Q8WVR3 580 aa20.75■□□□□ 0.91
NUP58-213ENST00000490231 HLFQ16534 295 aa20.74■□□□□ 0.91
NUP58-213ENST00000490231 JMYQ8N9B5 988 aa20.74■□□□□ 0.91
NUP58-213ENST00000490231 ARFGEF2Q9Y6D5 1785 aa20.74■□□□□ 0.91
NUP58-213ENST00000490231 LAMB4A4D0S4 1761 aa20.73■□□□□ 0.91
NUP58-213ENST00000490231 EIF4A1P60842 406 aaKnown RBP20.73■□□□□ 0.91
NUP58-213ENST00000490231 SLX4Q8IY92 1834 aa20.73■□□□□ 0.91
NUP58-213ENST00000490231 ERVV-1B6SEH8 477 aa20.72■□□□□ 0.91
NUP58-213ENST00000490231 CCDC93Q567U6 631 aa20.72■□□□□ 0.91
NUP58-213ENST00000490231 KDM3BQ7LBC6 1761 aa20.72■□□□□ 0.91
NUP58-213ENST00000490231 CCDC88AQ3V6T2 1871 aa20.71■□□□□ 0.91
NUP58-213ENST00000490231 MAPK8IP3Q9UPT6 1336 aa20.71■□□□□ 0.91
NUP58-213ENST00000490231 FAM177BA6PVY3 158 aa20.7■□□□□ 0.9
NUP58-213ENST00000490231 DICER1Q9UPY3 1922 aaKnown RBP20.7■□□□□ 0.9
NUP58-213ENST00000490231 GTF2E1P29083 439 aaPredicted RBP20.69■□□□□ 0.9
NUP58-213ENST00000490231 ALDH1B1P30837 517 aa20.69■□□□□ 0.9
NUP58-213ENST00000490231 THUMPD2Q9BTF0 503 aaKnown RBP20.69■□□□□ 0.9
NUP58-213ENST00000490231 NYXQ9GZU5 481 aa20.69■□□□□ 0.9
NUP58-213ENST00000490231 MAP3K15Q6ZN16 1313 aa20.69■□□□□ 0.9
NUP58-213ENST00000490231 DDNO94850 711 aaPredicted RBP20.68■□□□□ 0.9
NUP58-213ENST00000490231 FKBP4Q02790 459 aaKnown RBP eCLIP20.68■□□□□ 0.9
NUP58-213ENST00000490231 KIF6Q6ZMV9 814 aa20.68■□□□□ 0.9
NUP58-213ENST00000490231 NGEFQ8N5V2 710 aa20.68■□□□□ 0.9
NUP58-213ENST00000490231 RRP7AQ9Y3A4 280 aaKnown RBP20.68■□□□□ 0.9
NUP58-213ENST00000490231 DLG5Q8TDM6 1919 aa20.68■□□□□ 0.9
NUP58-213ENST00000490231 CRY2Q49AN0 593 aa20.67■□□□□ 0.9
NUP58-213ENST00000490231 RTKN2Q8IZC4 609 aa20.67■□□□□ 0.9
NUP58-213ENST00000490231 ERBB4Q15303 1308 aa20.67■□□□□ 0.9
NUP58-213ENST00000490231 RALBP1Q15311 655 aa20.66■□□□□ 0.9
NUP58-213ENST00000490231 TTLL7Q6ZT98 887 aa20.66■□□□□ 0.9
NUP58-213ENST00000490231 IBTKQ9P2D0 1353 aaPredicted RBP20.66■□□□□ 0.9
NUP58-213ENST00000490231 CACNA1SQ13698 1873 aa20.65■□□□□ 0.9
NUP58-213ENST00000490231 RIC1Q4ADV7 1423 aa20.65■□□□□ 0.9
NUP58-213ENST00000490231 IQCA1LA6NCM1 817 aa20.65■□□□□ 0.9
NUP58-213ENST00000490231 MYL6BP14649 208 aa20.65■□□□□ 0.9
NUP58-213ENST00000490231 CHADLQ6NUI6 762 aa20.65■□□□□ 0.9
NUP58-213ENST00000490231 L3MBTL3Q96JM7 780 aaPredicted RBP20.65■□□□□ 0.9
NUP58-213ENST00000490231 ABCC12Q96J65 1359 aa20.64■□□□□ 0.89
NUP58-213ENST00000490231 NUTM1Q86Y26 1132 aa20.64■□□□□ 0.89
NUP58-213ENST00000490231 TSPYL4Q9UJ04 414 aa20.64■□□□□ 0.89
NUP58-213ENST00000490231 OLFM4Q6UX06 510 aa20.63■□□□□ 0.89
NUP58-213ENST00000490231 ZBTB3Q9H5J0 574 aa20.63■□□□□ 0.89
NUP58-213ENST00000490231 ZNF277Q9NRM2 450 aaPredicted RBP20.63■□□□□ 0.89
NUP58-213ENST00000490231 BABAM1Q9NWV8 329 aa20.63■□□□□ 0.89
NUP58-213ENST00000490231 UBN2Q6ZU65 1347 aa20.62■□□□□ 0.89
NUP58-213ENST00000490231 RIPK4P57078 832 aa20.62■□□□□ 0.89
NUP58-213ENST00000490231 GIGYF2Q6Y7W6 1299 aaKnown RBP20.62■□□□□ 0.89
NUP58-213ENST00000490231 ZNF34Q8IZ26 560 aa20.62■□□□□ 0.89
NUP58-213ENST00000490231 SNED1Q8TER0 1413 aa20.61■□□□□ 0.89
NUP58-213ENST00000490231 POTEIP0CG38 1075 aa20.61■□□□□ 0.89
NUP58-213ENST00000490231 POTEJP0CG39 1038 aa20.61■□□□□ 0.89
NUP58-213ENST00000490231 GPTP24298 496 aa20.61■□□□□ 0.89
NUP58-213ENST00000490231 HOXA10P31260 410 aaPredicted RBP20.61■□□□□ 0.89
NUP58-213ENST00000490231 LMOD3Q0VAK6 560 aa20.61■□□□□ 0.89
NUP58-213ENST00000490231 SUSD4Q5VX71 490 aa20.61■□□□□ 0.89
NUP58-213ENST00000490231 CC2D2BQ6DHV5 1058 aa20.61■□□□□ 0.89
NUP58-213ENST00000490231 PSMD1Q99460 953 aa20.61■□□□□ 0.89
NUP58-213ENST00000490231 IARSP41252 1262 aaKnown RBP20.6■□□□□ 0.89
NUP58-213ENST00000490231 LRP10Q7Z4F1 713 aa20.6■□□□□ 0.89
NUP58-213ENST00000490231 SYNE4Q8N205 404 aa20.6■□□□□ 0.89
NUP58-213ENST00000490231 TAF1DQ9H5J8 278 aaPredicted RBP20.6■□□□□ 0.89
NUP58-213ENST00000490231 ZNF541Q9H0D2 1346 aa20.59■□□□□ 0.89
NUP58-213ENST00000490231 FZD9O00144 591 aa20.59■□□□□ 0.89
NUP58-213ENST00000490231 NTSR2O95665 410 aa20.59■□□□□ 0.89
NUP58-213ENST00000490231 TMPOP42166 694 aaKnown RBP20.59■□□□□ 0.89
NUP58-213ENST00000490231 PDIA6Q15084 440 aa20.59■□□□□ 0.89
NUP58-213ENST00000490231 GRIPAP1Q4V328 841 aa20.59■□□□□ 0.89
NUP58-213ENST00000490231 LDHDQ86WU2 507 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 1724.4 ms