RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ERBB4Q15303 1308 aa23.22■■□□□ 1.31
ITGB1-215ENST00000488494 RGL2O15211 777 aa23.21■■□□□ 1.31
ITGB1-215ENST00000488494 CHL1O00533 1208 aa23.2■■□□□ 1.3
ITGB1-215ENST00000488494 APAF1O14727 1248 aa23.2■■□□□ 1.3
ITGB1-215ENST00000488494 ST5P78524 1137 aa23.2■■□□□ 1.3
ITGB1-215ENST00000488494 HLFQ16534 295 aa23.2■■□□□ 1.3
ITGB1-215ENST00000488494 KIF6Q6ZMV9 814 aa23.2■■□□□ 1.3
ITGB1-215ENST00000488494 NBPF5PQ86XG9 351 aaPredicted RBP23.2■■□□□ 1.3
ITGB1-215ENST00000488494 BRIP1Q9BX63 1249 aa23.2■■□□□ 1.3
ITGB1-215ENST00000488494 NIP7Q9Y221 180 aaKnown RBP eCLIP23.2■■□□□ 1.3
ITGB1-215ENST00000488494 MAP3K15Q6ZN16 1313 aa23.19■■□□□ 1.3
ITGB1-215ENST00000488494 H0YIN7 160 aa23.19■■□□□ 1.3
ITGB1-215ENST00000488494 ANP32CO43423 234 aa23.19■■□□□ 1.3
ITGB1-215ENST00000488494 EIF2S2P20042 333 aaKnown RBP23.19■■□□□ 1.3
ITGB1-215ENST00000488494 TTLL7Q6ZT98 887 aa23.19■■□□□ 1.3
ITGB1-215ENST00000488494 PDE6BP35913 854 aa23.18■■□□□ 1.3
ITGB1-215ENST00000488494 KRT24Q2M2I5 525 aa23.18■■□□□ 1.3
ITGB1-215ENST00000488494 TTLL6Q8N841 843 aa23.17■■□□□ 1.3
ITGB1-215ENST00000488494 ZNF526Q8TF50 670 aaPredicted RBP23.17■■□□□ 1.3
ITGB1-215ENST00000488494 ZBTB3Q9H5J0 574 aa23.17■■□□□ 1.3
ITGB1-215ENST00000488494 FAM177BA6PVY3 158 aa23.16■■□□□ 1.3
ITGB1-215ENST00000488494 ERVV-1B6SEH8 477 aa23.16■■□□□ 1.3
ITGB1-215ENST00000488494 PROSER3Q2NL68 480 aa23.16■■□□□ 1.3
ITGB1-215ENST00000488494 NECTIN2Q92692 538 aa23.16■■□□□ 1.3
ITGB1-215ENST00000488494 NUP98P52948 1817 aa23.16■■□□□ 1.3
ITGB1-215ENST00000488494 PDIA6Q15084 440 aa23.15■■□□□ 1.3
ITGB1-215ENST00000488494 ZNF622Q969S3 477 aaKnown RBP eCLIP23.15■■□□□ 1.35e-8■□□□□ 8.1
ITGB1-215ENST00000488494 MRS2Q9HD23 443 aa23.15■■□□□ 1.3
ITGB1-215ENST00000488494 PDZRN3Q9UPQ7 1066 aa23.15■■□□□ 1.3
ITGB1-215ENST00000488494 TNRC6CQ9HCJ0 1690 aaKnown RBP23.15■■□□□ 1.3
ITGB1-215ENST00000488494 ANXA1P04083 346 aa23.14■■□□□ 1.29
ITGB1-215ENST00000488494 LRP10Q7Z4F1 713 aa23.14■■□□□ 1.29
ITGB1-215ENST00000488494 CFAP44Q96MT7 982 aa23.14■■□□□ 1.29
ITGB1-215ENST00000488494 GPBP1L1Q9HC44 474 aaPredicted RBP23.14■■□□□ 1.29
ITGB1-215ENST00000488494 MBIPQ9NS73 344 aa23.13■■□□□ 1.29
ITGB1-215ENST00000488494 ARFGEF2Q9Y6D5 1785 aa23.13■■□□□ 1.29
ITGB1-215ENST00000488494 CACNA1SQ13698 1873 aa23.13■■□□□ 1.29
ITGB1-215ENST00000488494 RASSF7Q02833 373 aa23.12■■□□□ 1.29
ITGB1-215ENST00000488494 C9orf131Q5VYM1 1079 aa23.12■■□□□ 1.29
ITGB1-215ENST00000488494 ABCC12Q96J65 1359 aa23.12■■□□□ 1.29
ITGB1-215ENST00000488494 UBN2Q6ZU65 1347 aa23.11■■□□□ 1.29
ITGB1-215ENST00000488494 SRGNP10124 158 aa23.11■■□□□ 1.29
ITGB1-215ENST00000488494 GPTP24298 496 aa23.11■■□□□ 1.29
ITGB1-215ENST00000488494 CALD1Q05682 793 aaKnown RBP23.11■■□□□ 1.29
ITGB1-215ENST00000488494 TPTE2Q6XPS3 522 aa23.11■■□□□ 1.29
ITGB1-215ENST00000488494 IFT57Q9NWB7 429 aa23.11■■□□□ 1.29
ITGB1-215ENST00000488494 HOXB7P09629 217 aa23.1■■□□□ 1.29
ITGB1-215ENST00000488494 HDGFL1Q5TGJ6 251 aa23.1■■□□□ 1.29
ITGB1-215ENST00000488494 STYK1Q6J9G0 422 aa23.1■■□□□ 1.29
ITGB1-215ENST00000488494 RNF181Q9P0P0 153 aa23.1■■□□□ 1.29
ITGB1-215ENST00000488494 IBTKQ9P2D0 1353 aaPredicted RBP23.1■■□□□ 1.29
ITGB1-215ENST00000488494 SENP3-EIF4A1A0A087X0R7 540 aa23.09■■□□□ 1.29
ITGB1-215ENST00000488494 ZNF853P0CG23 659 aa23.09■■□□□ 1.29
ITGB1-215ENST00000488494 CHPF2Q9P2E5 772 aa23.09■■□□□ 1.29
ITGB1-215ENST00000488494 ANKRD36CQ5JPF3 1778 aa23.09■■□□□ 1.29
ITGB1-215ENST00000488494 TIAM2Q8IVF5 1701 aa23.08■■□□□ 1.29
ITGB1-215ENST00000488494 GTF2E1P29083 439 aaPredicted RBP23.08■■□□□ 1.29
ITGB1-215ENST00000488494 GNAI1P63096 354 aa23.08■■□□□ 1.29
ITGB1-215ENST00000488494 PRPF40BQ6NWY9 871 aaKnown RBP23.08■■□□□ 1.29
ITGB1-215ENST00000488494 GIGYF2Q6Y7W6 1299 aaKnown RBP23.08■■□□□ 1.29
ITGB1-215ENST00000488494 XAGE3Q8WTP9 111 aa23.08■■□□□ 1.29
ITGB1-215ENST00000488494 MASTLQ96GX5 879 aa23.08■■□□□ 1.29
ITGB1-215ENST00000488494 NYXQ9GZU5 481 aa23.08■■□□□ 1.29
ITGB1-215ENST00000488494 DDX21Q9NR30 783 aaKnown RBP eCLIP23.08■■□□□ 1.29
ITGB1-215ENST00000488494 ZNF219Q9P2Y4 722 aaPredicted RBP23.08■■□□□ 1.29
ITGB1-215ENST00000488494 SBF1O95248 1867 aa23.07■■□□□ 1.28
ITGB1-215ENST00000488494 C1QTNF8P60827 252 aa23.07■■□□□ 1.28
ITGB1-215ENST00000488494 AIMP1Q12904 312 aaKnown RBP23.07■■□□□ 1.28
ITGB1-215ENST00000488494 DUSP27Q5VZP5 1158 aa23.07■■□□□ 1.28
ITGB1-215ENST00000488494 NUTM1Q86Y26 1132 aa23.07■■□□□ 1.28
ITGB1-215ENST00000488494 CNKSR1Q969H4 720 aa23.07■■□□□ 1.28
ITGB1-215ENST00000488494 SLX4Q8IY92 1834 aa23.06■■□□□ 1.28
ITGB1-215ENST00000488494 NFKBIEO00221 500 aa23.06■■□□□ 1.28
ITGB1-215ENST00000488494 C21orf2O43822 256 aa23.06■■□□□ 1.28
ITGB1-215ENST00000488494 COPS6Q7L5N1 327 aa23.06■■□□□ 1.28
ITGB1-215ENST00000488494 ZNF34Q8IZ26 560 aa23.06■■□□□ 1.28
ITGB1-215ENST00000488494 NPR1P16066 1061 aa23.05■■□□□ 1.28
ITGB1-215ENST00000488494 ERFEQ4G0M1 354 aa23.05■■□□□ 1.28
ITGB1-215ENST00000488494 SUSD4Q5VX71 490 aa23.05■■□□□ 1.28
ITGB1-215ENST00000488494 RIC1Q4ADV7 1423 aa23.05■■□□□ 1.28
ITGB1-215ENST00000488494 KLRG2A4D1S0 409 aaPredicted RBP23.04■■□□□ 1.28
ITGB1-215ENST00000488494 NTSR2O95665 410 aa23.04■■□□□ 1.28
ITGB1-215ENST00000488494 FER1L6Q2WGJ9 1857 aa23.03■■□□□ 1.28
ITGB1-215ENST00000488494 LMNB1P20700 586 aa23.03■■□□□ 1.28
ITGB1-215ENST00000488494 PRELPP51888 382 aa23.03■■□□□ 1.28
ITGB1-215ENST00000488494 DBF4Q9UBU7 674 aaPredicted RBP23.03■■□□□ 1.28
ITGB1-215ENST00000488494 PARP10Q53GL7 1025 aa23.02■■□□□ 1.28
ITGB1-215ENST00000488494 CCDC27Q2M243 656 aa23.01■■□□□ 1.27
ITGB1-215ENST00000488494 ELL2O00472 640 aaPredicted RBP23■■□□□ 1.27
ITGB1-215ENST00000488494 CRY2Q49AN0 593 aa23■■□□□ 1.27
ITGB1-215ENST00000488494 PPP1R42Q7Z4L9 355 aa23■■□□□ 1.27
ITGB1-215ENST00000488494 WWC1Q8IX03 1113 aa23■■□□□ 1.27
ITGB1-215ENST00000488494 TSR2Q969E8 191 aaKnown RBP23■■□□□ 1.27
ITGB1-215ENST00000488494 HSP90AB3PQ58FF7 597 aa22.99■■□□□ 1.27
ITGB1-215ENST00000488494 SOGA3Q5TF21 947 aa22.99■■□□□ 1.27
ITGB1-215ENST00000488494 C8orf58Q8NAV2 365 aa22.99■■□□□ 1.27
ITGB1-215ENST00000488494 NMRK2Q9NPI5 230 aa22.99■■□□□ 1.27
ITGB1-215ENST00000488494 ZC3H4Q9UPT8 1303 aaKnown RBP22.99■■□□□ 1.27
ITGB1-215ENST00000488494 KIF3CO14782 793 aa22.98■■□□□ 1.27
ITGB1-215ENST00000488494 UTP14AQ9BVJ6 771 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms