RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PRELPP51888 382 aa25.46■■□□□ 1.67
CD55-209ENST00000488171 NMRK2Q9NPI5 230 aa25.46■■□□□ 1.67
CD55-209ENST00000488171 HLFQ16534 295 aa25.45■■□□□ 1.67
CD55-209ENST00000488171 NBPF5PQ86XG9 351 aaPredicted RBP25.45■■□□□ 1.67
CD55-209ENST00000488171 CCDC146Q8IYE0 955 aa25.44■■□□□ 1.66
CD55-209ENST00000488171 TSPYL4Q9UJ04 414 aa25.44■■□□□ 1.66
CD55-209ENST00000488171 NIP7Q9Y221 180 aaKnown RBP eCLIP25.44■■□□□ 1.66
CD55-209ENST00000488171 NFKBIEO00221 500 aa25.44■■□□□ 1.66
CD55-209ENST00000488171 SRGNP10124 158 aa25.44■■□□□ 1.66
CD55-209ENST00000488171 LMNB1P20700 586 aa25.43■■□□□ 1.66
CD55-209ENST00000488171 NGEFQ8N5V2 710 aa25.43■■□□□ 1.66
CD55-209ENST00000488171 PRKRIP1Q9H875 184 aaPredicted RBP25.43■■□□□ 1.66
CD55-209ENST00000488171 RRP7AQ9Y3A4 280 aaKnown RBP25.43■■□□□ 1.66
CD55-209ENST00000488171 LMOD3Q0VAK6 560 aa25.42■■□□□ 1.66
CD55-209ENST00000488171 STYK1Q6J9G0 422 aa25.42■■□□□ 1.66
CD55-209ENST00000488171 ARFGEF2Q9Y6D5 1785 aa25.41■■□□□ 1.66
CD55-209ENST00000488171 C21orf2O43822 256 aa25.41■■□□□ 1.66
CD55-209ENST00000488171 TTLL7Q6ZT98 887 aa25.41■■□□□ 1.66
CD55-209ENST00000488171 BABAM1Q9NWV8 329 aa25.41■■□□□ 1.66
CD55-209ENST00000488171 CACNA1SQ13698 1873 aa25.4■■□□□ 1.66
CD55-209ENST00000488171 SLX4Q8IY92 1834 aa25.4■■□□□ 1.66
CD55-209ENST00000488171 FER1L6Q2WGJ9 1857 aa25.4■■□□□ 1.66
CD55-209ENST00000488171 ERVV-1B6SEH8 477 aa25.4■■□□□ 1.66
CD55-209ENST00000488171 MYL6BP14649 208 aa25.4■■□□□ 1.66
CD55-209ENST00000488171 WDR43Q15061 677 aaKnown RBP eCLIP25.4■■□□□ 1.66
CD55-209ENST00000488171 TPTE2Q6XPS3 522 aa25.4■■□□□ 1.66
CD55-209ENST00000488171 MASTLQ96GX5 879 aa25.4■■□□□ 1.66
CD55-209ENST00000488171 ZNF219Q9P2Y4 722 aaPredicted RBP25.4■■□□□ 1.66
CD55-209ENST00000488171 ADAMTS8Q9UP79 889 aa25.4■■□□□ 1.66
CD55-209ENST00000488171 NUP98P52948 1817 aa25.39■■□□□ 1.66
CD55-209ENST00000488171 MAP3K15Q6ZN16 1313 aa25.39■■□□□ 1.66
CD55-209ENST00000488171 ZC3H4Q9UPT8 1303 aaKnown RBP25.39■■□□□ 1.66
CD55-209ENST00000488171 CCDC88AQ3V6T2 1871 aa25.39■■□□□ 1.66
CD55-209ENST00000488171 TOMM70O94826 608 aa25.39■■□□□ 1.65
CD55-209ENST00000488171 HSPA6P17066 643 aa25.39■■□□□ 1.65
CD55-209ENST00000488171 NEUROD2Q15784 382 aa25.39■■□□□ 1.65
CD55-209ENST00000488171 CNKSR1Q969H4 720 aa25.39■■□□□ 1.65
CD55-209ENST00000488171 RUNDC1Q96C34 613 aa25.39■■□□□ 1.65
CD55-209ENST00000488171 TIAM2Q8IVF5 1701 aa25.39■■□□□ 1.65
CD55-209ENST00000488171 ERBB4Q15303 1308 aa25.39■■□□□ 1.65
CD55-209ENST00000488171 KDM2BQ8NHM5 1336 aa25.39■■□□□ 1.65
CD55-209ENST00000488171 KLRG2A4D1S0 409 aaPredicted RBP25.38■■□□□ 1.65
CD55-209ENST00000488171 FAM177BA6PVY3 158 aa25.38■■□□□ 1.65
CD55-209ENST00000488171 PRPF40BQ6NWY9 871 aaKnown RBP25.38■■□□□ 1.65
CD55-209ENST00000488171 TRIM35Q9UPQ4 493 aa25.37■■□□□ 1.65
CD55-209ENST00000488171 TNRC6CQ9HCJ0 1690 aaKnown RBP25.37■■□□□ 1.65
CD55-209ENST00000488171 KIF6Q6ZMV9 814 aa25.36■■□□□ 1.65
CD55-209ENST00000488171 LRP10Q7Z4F1 713 aa25.36■■□□□ 1.65
CD55-209ENST00000488171 PDIA6Q15084 440 aa25.35■■□□□ 1.65
CD55-209ENST00000488171 CEP350Q5VT06 3117 aa25.35■■□□□ 1.65
CD55-209ENST00000488171 EIF2S2P20042 333 aaKnown RBP25.34■■□□□ 1.65
CD55-209ENST00000488171 ZBTB3Q9H5J0 574 aa25.34■■□□□ 1.65
CD55-209ENST00000488171 RRAGCQ9HB90 399 aa25.34■■□□□ 1.65
CD55-209ENST00000488171 NPR1P16066 1061 aa25.33■■□□□ 1.65
CD55-209ENST00000488171 LTBP3Q9NS15 1303 aa25.33■■□□□ 1.65
CD55-209ENST00000488171 CHL1O00533 1208 aa25.32■■□□□ 1.64
CD55-209ENST00000488171 C7orf43Q8WVR3 580 aa25.32■■□□□ 1.64
CD55-209ENST00000488171 UBN2Q6ZU65 1347 aa25.32■■□□□ 1.64
CD55-209ENST00000488171 ABCC12Q96J65 1359 aa25.32■■□□□ 1.64
CD55-209ENST00000488171 DICER1Q9UPY3 1922 aaKnown RBP25.32■■□□□ 1.64
CD55-209ENST00000488171 GLTPD2A6NH11 291 aa25.31■■□□□ 1.64
CD55-209ENST00000488171 PROSER3Q2NL68 480 aa25.31■■□□□ 1.64
CD55-209ENST00000488171 NYXQ9GZU5 481 aa25.31■■□□□ 1.64
CD55-209ENST00000488171 GPTP24298 496 aa25.31■■□□□ 1.64
CD55-209ENST00000488171 GTF2E1P29083 439 aaPredicted RBP25.31■■□□□ 1.64
CD55-209ENST00000488171 SOGA3Q5TF21 947 aa25.31■■□□□ 1.64
CD55-209ENST00000488171 NUTM1Q86Y26 1132 aa25.31■■□□□ 1.64
CD55-209ENST00000488171 ZNF34Q8IZ26 560 aa25.31■■□□□ 1.64
CD55-209ENST00000488171 RBM46Q8TBY0 533 aaKnown RBP25.31■■□□□ 1.64
CD55-209ENST00000488171 TAOK3Q9H2K8 898 aa25.31■■□□□ 1.64
CD55-209ENST00000488171 IBTKQ9P2D0 1353 aaPredicted RBP25.3■■□□□ 1.64
CD55-209ENST00000488171 ANXA1P04083 346 aa25.3■■□□□ 1.64
CD55-209ENST00000488171 KRT24Q2M2I5 525 aa25.3■■□□□ 1.64
CD55-209ENST00000488171 GIGYF2Q6Y7W6 1299 aaKnown RBP25.3■■□□□ 1.64
CD55-209ENST00000488171 C16orf71Q8IYS4 520 aaPredicted RBP25.3■■□□□ 1.64
CD55-209ENST00000488171 ERFEQ4G0M1 354 aa25.29■■□□□ 1.64
CD55-209ENST00000488171 SUSD4Q5VX71 490 aa25.29■■□□□ 1.64
CD55-209ENST00000488171 NECTIN2Q92692 538 aa25.28■■□□□ 1.64
CD55-209ENST00000488171 LAS1LQ9Y4W2 734 aaKnown RBP25.28■■□□□ 1.64
CD55-209ENST00000488171 RIC1Q4ADV7 1423 aa25.27■■□□□ 1.64
CD55-209ENST00000488171 CRY2Q49AN0 593 aa25.27■■□□□ 1.64
CD55-209ENST00000488171 NTSR2O95665 410 aa25.26■■□□□ 1.63
CD55-209ENST00000488171 CCDC93Q567U6 631 aa25.26■■□□□ 1.63
CD55-209ENST00000488171 OLFM4Q6UX06 510 aa25.25■■□□□ 1.63
CD55-209ENST00000488171 WDR90Q96KV7 1748 aa25.24■■□□□ 1.63
CD55-209ENST00000488171 ALDH1B1P30837 517 aa25.24■■□□□ 1.63
CD55-209ENST00000488171 APLP1P51693 650 aa25.24■■□□□ 1.63
CD55-209ENST00000488171 VEGFAP15692 232 aaPredicted RBP25.23■■□□□ 1.63
CD55-209ENST00000488171 FSTL1Q12841 308 aa25.23■■□□□ 1.63
CD55-209ENST00000488171 COPS6Q7L5N1 327 aa25.23■■□□□ 1.63
CD55-209ENST00000488171 CFAP44Q96MT7 982 aa25.23■■□□□ 1.63
CD55-209ENST00000488171 DDX21Q9NR30 783 aaKnown RBP eCLIP25.23■■□□□ 1.63
CD55-209ENST00000488171 ANKRD36CQ5JPF3 1778 aa25.22■■□□□ 1.63
CD55-209ENST00000488171 POTECB2RU33 542 aa25.22■■□□□ 1.63
CD55-209ENST00000488171 APAF1O14727 1248 aa25.22■■□□□ 1.63
CD55-209ENST00000488171 PARP10Q53GL7 1025 aa25.22■■□□□ 1.63
CD55-209ENST00000488171 DPY19L2Q6NUT2 758 aa25.22■■□□□ 1.63
CD55-209ENST00000488171 XAGE3Q8WTP9 111 aa25.22■■□□□ 1.63
CD55-209ENST00000488171 FKBP4Q02790 459 aaKnown RBP eCLIP25.21■■□□□ 1.63
CD55-209ENST00000488171 AIMP1Q12904 312 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms