RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 RTN1Q16799 776 aa8.43□□□□□ -1.06
PTEN-204ENST00000487939 FIGNL1Q6PIW4 674 aa8.43□□□□□ -1.06
PTEN-204ENST00000487939 TRERF1Q96PN7 1200 aa8.43□□□□□ -1.06
PTEN-204ENST00000487939 ZIC5Q96T25 663 aa8.43□□□□□ -1.06
PTEN-204ENST00000487939 ANKIB1Q9P2G1 1089 aa8.43□□□□□ -1.06
PTEN-204ENST00000487939 KCNMA1Q12791 1236 aa8.42□□□□□ -1.06
PTEN-204ENST00000487939 SLAIN2Q9P270 581 aa8.42□□□□□ -1.06
PTEN-204ENST00000487939 SSFA2P28290 1259 aa8.41□□□□□ -1.06
PTEN-204ENST00000487939 GTPBP3Q969Y2 492 aaKnown RBP8.41□□□□□ -1.06
PTEN-204ENST00000487939 PHF24Q9UPV7 400 aa8.41□□□□□ -1.06
PTEN-204ENST00000487939 MTMR7Q9Y216 660 aa8.41□□□□□ -1.06
PTEN-204ENST00000487939 SAMD5Q5TGI4 173 aa8.4□□□□□ -1.06
PTEN-204ENST00000487939 MYO19Q96H55 970 aa8.4□□□□□ -1.06
PTEN-204ENST00000487939 MKNK1Q9BUB5 465 aa8.4□□□□□ -1.06
PTEN-204ENST00000487939 CARNS1A5YM72 827 aa8.39□□□□□ -1.07
PTEN-204ENST00000487939 GSK3AP49840 483 aa8.39□□□□□ -1.07
PTEN-204ENST00000487939 C7orf43Q8WVR3 580 aa8.39□□□□□ -1.07
PTEN-204ENST00000487939 PCDHGC4Q9Y5F7 938 aa8.39□□□□□ -1.07
PTEN-204ENST00000487939 ATXN7O15265 892 aaPredicted RBP8.38□□□□□ -1.07
PTEN-204ENST00000487939 C16orf46Q6P387 395 aa8.38□□□□□ -1.07
PTEN-204ENST00000487939 LRRC69Q6ZNQ3 347 aa8.38□□□□□ -1.07
PTEN-204ENST00000487939 CFHR5Q9BXR6 569 aa8.38□□□□□ -1.07
PTEN-204ENST00000487939 ZCCHC2Q9C0B9 1178 aaKnown RBP8.38□□□□□ -1.07
PTEN-204ENST00000487939 QTRT2Q9H974 415 aaKnown RBP8.38□□□□□ -1.07
PTEN-204ENST00000487939 THBS1P07996 1170 aa8.37□□□□□ -1.07
PTEN-204ENST00000487939 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
PTEN-204ENST00000487939 ATXN7L1Q9ULK2 861 aaPredicted RBP8.37□□□□□ -1.07
PTEN-204ENST00000487939 FAM157BP0CG42 384 aa8.36□□□□□ -1.07
PTEN-204ENST00000487939 UBAP2LQ14157 1087 aaKnown RBP8.36□□□□□ -1.07
PTEN-204ENST00000487939 C11orf91Q3C1V1 193 aa8.36□□□□□ -1.07
PTEN-204ENST00000487939 IER5Q5VY09 327 aa8.36□□□□□ -1.07
PTEN-204ENST00000487939 KCTD17Q8N5Z5 321 aa8.36□□□□□ -1.07
PTEN-204ENST00000487939 TGFBR3LH3BV60 316 aa8.35□□□□□ -1.07
PTEN-204ENST00000487939 GPR25O00155 361 aa8.35□□□□□ -1.07
PTEN-204ENST00000487939 DGKZQ13574 1117 aa8.35□□□□□ -1.07
PTEN-204ENST00000487939 COX20Q5RI15 118 aa8.35□□□□□ -1.07
PTEN-204ENST00000487939 GPR161Q8N6U8 529 aaKnown RBP8.35□□□□□ -1.07
PTEN-204ENST00000487939 HSH2DQ96JZ2 352 aa8.35□□□□□ -1.07
PTEN-204ENST00000487939 COL25A1Q9BXS0 654 aaPredicted RBP8.35□□□□□ -1.07
PTEN-204ENST00000487939 KHNYNO15037 678 aaKnown RBP8.34□□□□□ -1.07
PTEN-204ENST00000487939 BRD1O95696 1058 aa8.34□□□□□ -1.07
PTEN-204ENST00000487939 LAMC2Q13753 1193 aa8.34□□□□□ -1.07
PTEN-204ENST00000487939 NAA30Q147X3 362 aaPredicted RBP8.34□□□□□ -1.07
PTEN-204ENST00000487939 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.07
PTEN-204ENST00000487939 ABHD17AQ96GS6 310 aa8.34□□□□□ -1.07
PTEN-204ENST00000487939 NDFIP2Q9NV92 336 aa8.34□□□□□ -1.07
PTEN-204ENST00000487939 KLK14Q9P0G3 267 aa8.34□□□□□ -1.07
PTEN-204ENST00000487939 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.07
PTEN-204ENST00000487939 DCDC2BA2VCK2 349 aa8.33□□□□□ -1.08
PTEN-204ENST00000487939 BNIP3LO60238 219 aa8.33□□□□□ -1.08
PTEN-204ENST00000487939 ARID4AP29374 1257 aaPredicted RBP8.33□□□□□ -1.08
PTEN-204ENST00000487939 TNP2Q05952 138 aa8.33□□□□□ -1.08
PTEN-204ENST00000487939 CAPN12Q6ZSI9 719 aa8.33□□□□□ -1.08
PTEN-204ENST00000487939 ZNF280CQ8ND82 737 aa8.33□□□□□ -1.08
PTEN-204ENST00000487939 IFT43Q96FT9 208 aa8.33□□□□□ -1.08
PTEN-204ENST00000487939 CEP63Q96MT8 703 aa8.33□□□□□ -1.08
PTEN-204ENST00000487939 TRAIPQ9BWF2 469 aa8.33□□□□□ -1.08
PTEN-204ENST00000487939 LRFN2Q9ULH4 789 aa8.33□□□□□ -1.08
PTEN-204ENST00000487939 MAPTP10636 758 aaKnown RBP8.32□□□□□ -1.08
PTEN-204ENST00000487939 FGFR3P22607 806 aa8.32□□□□□ -1.08
PTEN-204ENST00000487939 BRD2P25440 801 aaKnown RBP8.32□□□□□ -1.08
PTEN-204ENST00000487939 BTLAQ7Z6A9 289 aa8.32□□□□□ -1.08
PTEN-204ENST00000487939 SAP130Q9H0E3 1048 aa8.32□□□□□ -1.08
PTEN-204ENST00000487939 MBIPQ9NS73 344 aa8.32□□□□□ -1.08
PTEN-204ENST00000487939 SEPT3Q9UH03 358 aa8.32□□□□□ -1.08
PTEN-204ENST00000487939 EFSO43281 561 aa8.31□□□□□ -1.08
PTEN-204ENST00000487939 PDIA4P13667 645 aaKnown RBP8.31□□□□□ -1.08
PTEN-204ENST00000487939 EPB42P16452 691 aa8.31□□□□□ -1.08
PTEN-204ENST00000487939 MX2P20592 715 aa8.31□□□□□ -1.08
PTEN-204ENST00000487939 TYRO3Q06418 890 aa8.31□□□□□ -1.08
PTEN-204ENST00000487939 GAS6Q14393 721 aa8.31□□□□□ -1.08
PTEN-204ENST00000487939 ABTB2Q8N961 1025 aa8.31□□□□□ -1.08
PTEN-204ENST00000487939 HELQQ8TDG4 1101 aa8.31□□□□□ -1.08
PTEN-204ENST00000487939 GTF3C2Q8WUA4 911 aaPredicted RBP8.31□□□□□ -1.08
PTEN-204ENST00000487939 KLRG1Q96E93 195 aa8.31□□□□□ -1.08
PTEN-204ENST00000487939 BRD7Q9NPI1 651 aa8.31□□□□□ -1.08
PTEN-204ENST00000487939 STIM2Q9P246 746 aa8.31□□□□□ -1.08
PTEN-204ENST00000487939 MICAL2O94851 1124 aa8.3□□□□□ -1.08
PTEN-204ENST00000487939 RNFT1Q5M7Z0 435 aa8.3□□□□□ -1.08
PTEN-204ENST00000487939 FAM182BQ5T319 152 aa8.3□□□□□ -1.08
PTEN-204ENST00000487939 TMEM151AQ8N4L1 468 aa8.3□□□□□ -1.08
PTEN-204ENST00000487939 CCER1Q8TC90 406 aaPredicted RBP8.3□□□□□ -1.08
PTEN-204ENST00000487939 CNTNAP3BQ96NU0 1288 aa8.3□□□□□ -1.08
PTEN-204ENST00000487939 CNTNAP3Q9BZ76 1288 aa8.3□□□□□ -1.08
PTEN-204ENST00000487939 MARK1Q9P0L2 795 aa8.3□□□□□ -1.08
PTEN-204ENST00000487939 BCS1LQ9Y276 419 aa8.3□□□□□ -1.08
PTEN-204ENST00000487939 TNFRSF10BO14763 440 aa8.29□□□□□ -1.08
PTEN-204ENST00000487939 BMP4P12644 408 aa8.29□□□□□ -1.08
PTEN-204ENST00000487939 SCNN1AP37088 669 aa8.29□□□□□ -1.08
PTEN-204ENST00000487939 MAP2K3P46734 347 aa8.29□□□□□ -1.08
PTEN-204ENST00000487939 ARSDP51689 593 aa8.29□□□□□ -1.08
PTEN-204ENST00000487939 KCNQ4P56696 695 aa8.29□□□□□ -1.08
PTEN-204ENST00000487939 DMGDHQ9UI17 866 aaKnown RBP8.29□□□□□ -1.08
PTEN-204ENST00000487939 PATL2C9JE40 543 aaKnown RBP8.28□□□□□ -1.08
PTEN-204ENST00000487939 IDH3AP50213 366 aa8.28□□□□□ -1.08
PTEN-204ENST00000487939 KRT76Q01546 638 aa8.28□□□□□ -1.08
PTEN-204ENST00000487939 SRSF11Q05519 484 aaKnown RBP8.28□□□□□ -1.08
PTEN-204ENST00000487939 SF3B2Q13435 895 aaKnown RBP8.28□□□□□ -1.08
PTEN-204ENST00000487939 TREML1Q86YW5 311 aa8.28□□□□□ -1.08
PTEN-204ENST00000487939 FAM13BQ9NYF5 915 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms