RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 FAM98CQ17RN3 349 aaKnown RBP25.19■■□□□ 1.62
PHF1-209ENST00000487667 CWF19L2Q2TBE0 894 aaKnown RBP25.19■■□□□ 1.62
PHF1-209ENST00000487667 NOP58Q9Y2X3 529 aaKnown RBP25.19■■□□□ 1.62
PHF1-209ENST00000487667 NBPF26B4DH59 902 aa25.18■■□□□ 1.62
PHF1-209ENST00000487667 IGKV5-2P06315 115 aa25.18■■□□□ 1.62
PHF1-209ENST00000487667 GCKRQ14397 625 aa25.18■■□□□ 1.62
PHF1-209ENST00000487667 NBPF14Q5TI25 921 aa25.18■■□□□ 1.62
PHF1-209ENST00000487667 NBPF10Q6P3W6 841 aaKnown RBP25.18■■□□□ 1.62
PHF1-209ENST00000487667 NBPF15Q8N660 670 aa25.18■■□□□ 1.62
PHF1-209ENST00000487667 MYD88Q99836 296 aa25.18■■□□□ 1.62
PHF1-209ENST00000487667 OSBPL3Q9H4L5 887 aa25.18■■□□□ 1.62
PHF1-209ENST00000487667 COL15A1P39059 1388 aa25.17■■□□□ 1.62
PHF1-209ENST00000487667 ASAP1Q9ULH1 1129 aa25.17■■□□□ 1.62
PHF1-209ENST00000487667 EXOC6BQ9Y2D4 811 aa25.17■■□□□ 1.62
PHF1-209ENST00000487667 ARFGEF2Q9Y6D5 1785 aa25.16■■□□□ 1.62
PHF1-209ENST00000487667 TTC22Q5TAA0 569 aa25.15■■□□□ 1.62
PHF1-209ENST00000487667 KIF1BPQ96EK5 621 aa25.14■■□□□ 1.62
PHF1-209ENST00000487667 SURF6O75683 361 aaKnown RBP25.14■■□□□ 1.61
PHF1-209ENST00000487667 A1BGP04217 495 aa25.14■■□□□ 1.61
PHF1-209ENST00000487667 ERC1Q8IUD2 1116 aa25.14■■□□□ 1.61
PHF1-209ENST00000487667 GJD4Q96KN9 370 aaPredicted RBP25.14■■□□□ 1.61
PHF1-209ENST00000487667 TRPC5Q9UL62 973 aaPredicted RBP25.14■■□□□ 1.61
PHF1-209ENST00000487667 DOT1LQ8TEK3 1739 aa25.13■■□□□ 1.61
PHF1-209ENST00000487667 APBB1O00213 710 aa25.13■■□□□ 1.61
PHF1-209ENST00000487667 RBM42Q9BTD8 480 aaKnown RBP25.13■■□□□ 1.61
PHF1-209ENST00000487667 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.13■■□□□ 1.61
PHF1-209ENST00000487667 A0A0G2JS52 829 aa25.12■■□□□ 1.61
PHF1-209ENST00000487667 AOX1Q06278 1338 aa25.12■■□□□ 1.61
PHF1-209ENST00000487667 PRIM1P49642 420 aaKnown RBP25.12■■□□□ 1.61
PHF1-209ENST00000487667 SYTL4Q96C24 671 aaPredicted RBP25.12■■□□□ 1.61
PHF1-209ENST00000487667 SMARCA5O60264 1052 aaPredicted RBP25.11■■□□□ 1.61
PHF1-209ENST00000487667 CDC45O75419 566 aa25.11■■□□□ 1.61
PHF1-209ENST00000487667 QTRT2Q9H974 415 aaKnown RBP25.11■■□□□ 1.61
PHF1-209ENST00000487667 PIP4K2AP48426 406 aaPredicted RBP25.1■■□□□ 1.61
PHF1-209ENST00000487667 DNAJC10Q8IXB1 793 aa25.1■■□□□ 1.61
PHF1-209ENST00000487667 KIF6Q6ZMV9 814 aa25.1■■□□□ 1.61
PHF1-209ENST00000487667 C16orf71Q8IYS4 520 aaPredicted RBP25.1■■□□□ 1.61
PHF1-209ENST00000487667 MARCH10Q8NA82 808 aaPredicted RBP25.1■■□□□ 1.61
PHF1-209ENST00000487667 CCDC191Q8NCU4 936 aa25.1■■□□□ 1.61
PHF1-209ENST00000487667 SUCLG2Q96I99 432 aa25.1■■□□□ 1.61
PHF1-209ENST00000487667 NUP188Q5SRE5 1749 aa25.09■■□□□ 1.61
PHF1-209ENST00000487667 AFDNP55196 1824 aaKnown RBP25.09■■□□□ 1.61
PHF1-209ENST00000487667 SEC24BO95487 1268 aa25.09■■□□□ 1.61
PHF1-209ENST00000487667 PDE1AP54750 535 aa25.09■■□□□ 1.61
PHF1-209ENST00000487667 CASC1Q6TDU7 716 aa25.09■■□□□ 1.61
PHF1-209ENST00000487667 TBC1D32Q96NH3 1257 aa25.09■■□□□ 1.61
PHF1-209ENST00000487667 RHPN1Q8TCX5 695 aa25.08■■□□□ 1.61
PHF1-209ENST00000487667 SMARCC1Q92922 1105 aaPredicted RBP25.08■■□□□ 1.61
PHF1-209ENST00000487667 CWC25Q9NXE8 425 aaPredicted RBP25.08■■□□□ 1.61
PHF1-209ENST00000487667 STAP2Q9UGK3 403 aa25.08■■□□□ 1.61
PHF1-209ENST00000487667 ATRNO75882 1429 aa25.08■■□□□ 1.61
PHF1-209ENST00000487667 MX1P20591 662 aa25.08■■□□□ 1.6
PHF1-209ENST00000487667 SALL3Q9BXA9 1300 aa25.07■■□□□ 1.6
PHF1-209ENST00000487667 TTLL7Q6ZT98 887 aa25.07■■□□□ 1.6
PHF1-209ENST00000487667 BICC1Q9H694 974 aaKnown RBP25.07■■□□□ 1.6
PHF1-209ENST00000487667 GSPT1P15170 499 aaKnown RBP25.06■■□□□ 1.6
PHF1-209ENST00000487667 OS9Q13438 667 aaPredicted RBP25.06■■□□□ 1.6
PHF1-209ENST00000487667 A0A087WZG4 1122 aa25.06■■□□□ 1.6
PHF1-209ENST00000487667 CYP19A1P11511 503 aaPredicted RBP25.06■■□□□ 1.6
PHF1-209ENST00000487667 TRIM28Q13263 835 aaKnown RBP25.06■■□□□ 1.6
PHF1-209ENST00000487667 HSP90AB3PQ58FF7 597 aa25.05■■□□□ 1.6
PHF1-209ENST00000487667 KAZALD1Q96I82 304 aa25.05■■□□□ 1.6
PHF1-209ENST00000487667 DAXXQ9UER7 740 aaPredicted RBP25.05■■□□□ 1.6
PHF1-209ENST00000487667 CICQ96RK0 1608 aaPredicted RBP25.04■■□□□ 1.6
PHF1-209ENST00000487667 KAT6BQ8WYB5 2073 aa25.04■■□□□ 1.6
PHF1-209ENST00000487667 H7C1W4 665 aa25.04■■□□□ 1.6
PHF1-209ENST00000487667 RABL6Q3YEC7 729 aaPredicted RBP25.04■■□□□ 1.6
PHF1-209ENST00000487667 OTUD7AQ8TE49 926 aaPredicted RBP25.04■■□□□ 1.6
PHF1-209ENST00000487667 IL6STP40189 918 aaPredicted RBP25.03■■□□□ 1.6
PHF1-209ENST00000487667 G3BP1Q13283 466 aaKnown RBP eCLIP25.03■■□□□ 1.6
PHF1-209ENST00000487667 TCIRG1Q13488 830 aa25.03■■□□□ 1.6
PHF1-209ENST00000487667 TBC1D9Q6ZT07 1266 aa25.03■■□□□ 1.6
PHF1-209ENST00000487667 C22orf23Q9BZE7 217 aa25.03■■□□□ 1.6
PHF1-209ENST00000487667 ATP5J2-PTCD1G3V325 749 aa25.02■■□□□ 1.6
PHF1-209ENST00000487667 MFAP1P55081 439 aaKnown RBP25.02■■□□□ 1.6
PHF1-209ENST00000487667 UBE3BQ7Z3V4 1068 aa25.02■■□□□ 1.6
PHF1-209ENST00000487667 CLASRPQ8N2M8 674 aaKnown RBP25.02■■□□□ 1.6
PHF1-209ENST00000487667 ZBTB3Q9H5J0 574 aa25.02■■□□□ 1.6
PHF1-209ENST00000487667 CASP7P55210 303 aa25.01■■□□□ 1.59
PHF1-209ENST00000487667 ZNF772Q68DY9 489 aaPredicted RBP25.01■■□□□ 1.59
PHF1-209ENST00000487667 ISCA1Q9BUE6 129 aa25.01■■□□□ 1.59
PHF1-209ENST00000487667 MAP3K15Q6ZN16 1313 aa25.01■■□□□ 1.59
PHF1-209ENST00000487667 TJP1Q07157 1748 aa25.01■■□□□ 1.59
PHF1-209ENST00000487667 ONECUT3O60422 494 aaPredicted RBP25■■□□□ 1.59
PHF1-209ENST00000487667 SDSP20132 328 aa25■■□□□ 1.59
PHF1-209ENST00000487667 SLC4A9Q96Q91 983 aa25■■□□□ 1.59
PHF1-209ENST00000487667 BECN1Q14457 450 aa25■■□□□ 1.59
PHF1-209ENST00000487667 GPATCH3Q96I76 525 aa25■■□□□ 1.59
PHF1-209ENST00000487667 TTC41PQ6P2S7 1318 aa24.99■■□□□ 1.59
PHF1-209ENST00000487667 ERVV-1B6SEH8 477 aa24.99■■□□□ 1.59
PHF1-209ENST00000487667 ACSBG1Q96GR2 724 aa24.99■■□□□ 1.59
PHF1-209ENST00000487667 BCL11AQ9H165 835 aa24.99■■□□□ 1.59
PHF1-209ENST00000487667 COPRSQ9NQ92 184 aa24.99■■□□□ 1.59
PHF1-209ENST00000487667 ZNF831Q5JPB2 1677 aa24.99■■□□□ 1.59
PHF1-209ENST00000487667 USP42Q9H9J4 1324 aaKnown RBP24.98■■□□□ 1.59
PHF1-209ENST00000487667 GIGYF2Q6Y7W6 1299 aaKnown RBP24.98■■□□□ 1.59
PHF1-209ENST00000487667 SEPT12Q8IYM1 358 aa24.98■■□□□ 1.59
PHF1-209ENST00000487667 IL1RAPL2Q9NP60 686 aa24.98■■□□□ 1.59
PHF1-209ENST00000487667 THSD7AQ9UPZ6 1657 aa24.97■■□□□ 1.59
PHF1-209ENST00000487667 LOC102724428A0A0B4J2F2 783 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms