RNA–Protein interactions for RNA: ENST00000487585.5

HDAC11-218, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-218ENST00000487585 CEP350Q5VT06 3117 aa25.58■■□□□ 1.69
HDAC11-218ENST00000487585 LMNB1P20700 586 aa25.57■■□□□ 1.68
HDAC11-218ENST00000487585 KDM2BQ8NHM5 1336 aa25.57■■□□□ 1.68
HDAC11-218ENST00000487585 NPHP1O15259 732 aa25.56■■□□□ 1.68
HDAC11-218ENST00000487585 PRELPP51888 382 aa25.56■■□□□ 1.68
HDAC11-218ENST00000487585 NFKBIEO00221 500 aa25.55■■□□□ 1.68
HDAC11-218ENST00000487585 NBPF5PQ86XG9 351 aaPredicted RBP25.55■■□□□ 1.68
HDAC11-218ENST00000487585 MYBBP1AQ9BQG0 1328 aaKnown RBP25.55■■□□□ 1.68
HDAC11-218ENST00000487585 SRGNP10124 158 aa25.54■■□□□ 1.68
HDAC11-218ENST00000487585 STYK1Q6J9G0 422 aa25.54■■□□□ 1.68
HDAC11-218ENST00000487585 TNRC6CQ9HCJ0 1690 aaKnown RBP25.54■■□□□ 1.68
HDAC11-218ENST00000487585 CNKSR1Q969H4 720 aa25.53■■□□□ 1.68
HDAC11-218ENST00000487585 NIP7Q9Y221 180 aaKnown RBP eCLIP25.53■■□□□ 1.68
HDAC11-218ENST00000487585 ARFGEF2Q9Y6D5 1785 aa25.53■■□□□ 1.68
HDAC11-218ENST00000487585 FER1L6Q2WGJ9 1857 aa25.52■■□□□ 1.68
HDAC11-218ENST00000487585 RIPK4P57078 832 aa25.52■■□□□ 1.68
HDAC11-218ENST00000487585 MASTLQ96GX5 879 aa25.52■■□□□ 1.68
HDAC11-218ENST00000487585 CCDC88AQ3V6T2 1871 aa25.51■■□□□ 1.67
HDAC11-218ENST00000487585 C21orf2O43822 256 aa25.51■■□□□ 1.67
HDAC11-218ENST00000487585 HLFQ16534 295 aa25.51■■□□□ 1.67
HDAC11-218ENST00000487585 TPTE2Q6XPS3 522 aa25.51■■□□□ 1.67
HDAC11-218ENST00000487585 TIAM2Q8IVF5 1701 aa25.51■■□□□ 1.67
HDAC11-218ENST00000487585 KLRG2A4D1S0 409 aaPredicted RBP25.5■■□□□ 1.67
HDAC11-218ENST00000487585 ERVV-1B6SEH8 477 aa25.5■■□□□ 1.67
HDAC11-218ENST00000487585 TMPOP42166 694 aaKnown RBP25.5■■□□□ 1.67
HDAC11-218ENST00000487585 SLX4Q8IY92 1834 aa25.5■■□□□ 1.67
HDAC11-218ENST00000487585 RBM46Q8TBY0 533 aaKnown RBP25.5■■□□□ 1.67
HDAC11-218ENST00000487585 BABAM1Q9NWV8 329 aa25.5■■□□□ 1.67
HDAC11-218ENST00000487585 ERBB4Q15303 1308 aa25.49■■□□□ 1.67
HDAC11-218ENST00000487585 TSPYL4Q9UJ04 414 aa25.49■■□□□ 1.67
HDAC11-218ENST00000487585 LTBP3Q9NS15 1303 aa25.48■■□□□ 1.67
HDAC11-218ENST00000487585 LMOD3Q0VAK6 560 aa25.48■■□□□ 1.67
HDAC11-218ENST00000487585 PRPF40BQ6NWY9 871 aaKnown RBP25.48■■□□□ 1.67
HDAC11-218ENST00000487585 C16orf71Q8IYS4 520 aaPredicted RBP25.48■■□□□ 1.67
HDAC11-218ENST00000487585 RRAGCQ9HB90 399 aa25.48■■□□□ 1.67
HDAC11-218ENST00000487585 ZNF219Q9P2Y4 722 aaPredicted RBP25.48■■□□□ 1.67
HDAC11-218ENST00000487585 RRP7AQ9Y3A4 280 aaKnown RBP25.48■■□□□ 1.67
HDAC11-218ENST00000487585 CACNA1SQ13698 1873 aa25.48■■□□□ 1.67
HDAC11-218ENST00000487585 NUP98P52948 1817 aa25.47■■□□□ 1.67
HDAC11-218ENST00000487585 MAP3K15Q6ZN16 1313 aa25.47■■□□□ 1.67
HDAC11-218ENST00000487585 GLTPD2A6NH11 291 aa25.47■■□□□ 1.67
HDAC11-218ENST00000487585 DICER1Q9UPY3 1922 aaKnown RBP25.46■■□□□ 1.67
HDAC11-218ENST00000487585 NPR1P16066 1061 aa25.46■■□□□ 1.67
HDAC11-218ENST00000487585 SOGA3Q5TF21 947 aa25.46■■□□□ 1.67
HDAC11-218ENST00000487585 NGEFQ8N5V2 710 aa25.46■■□□□ 1.67
HDAC11-218ENST00000487585 APLP1P51693 650 aa25.45■■□□□ 1.66
HDAC11-218ENST00000487585 KIF6Q6ZMV9 814 aa25.45■■□□□ 1.66
HDAC11-218ENST00000487585 TTLL7Q6ZT98 887 aa25.45■■□□□ 1.66
HDAC11-218ENST00000487585 MYL6BP14649 208 aa25.44■■□□□ 1.66
HDAC11-218ENST00000487585 FSTL1Q12841 308 aa25.44■■□□□ 1.66
HDAC11-218ENST00000487585 TAOK3Q9H2K8 898 aa25.44■■□□□ 1.66
HDAC11-218ENST00000487585 FAM177BA6PVY3 158 aa25.43■■□□□ 1.66
HDAC11-218ENST00000487585 C7orf43Q8WVR3 580 aa25.43■■□□□ 1.66
HDAC11-218ENST00000487585 NYXQ9GZU5 481 aa25.43■■□□□ 1.66
HDAC11-218ENST00000487585 RUNDC1Q96C34 613 aa25.42■■□□□ 1.66
HDAC11-218ENST00000487585 IBTKQ9P2D0 1353 aaPredicted RBP25.42■■□□□ 1.66
HDAC11-218ENST00000487585 GTF2E1P29083 439 aaPredicted RBP25.41■■□□□ 1.66
HDAC11-218ENST00000487585 WDR43Q15061 677 aaKnown RBP eCLIP25.41■■□□□ 1.66
HDAC11-218ENST00000487585 ERFEQ4G0M1 354 aa25.41■■□□□ 1.66
HDAC11-218ENST00000487585 LRP10Q7Z4F1 713 aa25.41■■□□□ 1.66
HDAC11-218ENST00000487585 CCDC146Q8IYE0 955 aa25.41■■□□□ 1.66
HDAC11-218ENST00000487585 VEGFAP15692 232 aaPredicted RBP25.4■■□□□ 1.66
HDAC11-218ENST00000487585 PDIA6Q15084 440 aa25.4■■□□□ 1.66
HDAC11-218ENST00000487585 ZBTB3Q9H5J0 574 aa25.4■■□□□ 1.66
HDAC11-218ENST00000487585 PRKRIP1Q9H875 184 aaPredicted RBP25.4■■□□□ 1.66
HDAC11-218ENST00000487585 RIC1Q4ADV7 1423 aa25.39■■□□□ 1.66
HDAC11-218ENST00000487585 CCDC93Q567U6 631 aa25.39■■□□□ 1.66
HDAC11-218ENST00000487585 DPY19L2Q6NUT2 758 aa25.39■■□□□ 1.66
HDAC11-218ENST00000487585 WDR90Q96KV7 1748 aa25.39■■□□□ 1.65
HDAC11-218ENST00000487585 ABCC12Q96J65 1359 aa25.39■■□□□ 1.65
HDAC11-218ENST00000487585 UBN2Q6ZU65 1347 aa25.38■■□□□ 1.65
HDAC11-218ENST00000487585 NEUROD2Q15784 382 aa25.38■■□□□ 1.65
HDAC11-218ENST00000487585 CRY2Q49AN0 593 aa25.38■■□□□ 1.65
HDAC11-218ENST00000487585 GIGYF2Q6Y7W6 1299 aaKnown RBP25.38■■□□□ 1.65
HDAC11-218ENST00000487585 ZNF34Q8IZ26 560 aa25.38■■□□□ 1.65
HDAC11-218ENST00000487585 ADAMTS8Q9UP79 889 aa25.38■■□□□ 1.65
HDAC11-218ENST00000487585 TRIM35Q9UPQ4 493 aa25.38■■□□□ 1.65
HDAC11-218ENST00000487585 CHL1O00533 1208 aa25.37■■□□□ 1.65
HDAC11-218ENST00000487585 EIF2S2P20042 333 aaKnown RBP25.37■■□□□ 1.65
HDAC11-218ENST00000487585 ALDH1B1P30837 517 aa25.37■■□□□ 1.65
HDAC11-218ENST00000487585 NUTM1Q86Y26 1132 aa25.37■■□□□ 1.65
HDAC11-218ENST00000487585 GPTP24298 496 aa25.36■■□□□ 1.65
HDAC11-218ENST00000487585 SMC1BQ8NDV3 1235 aa25.36■■□□□ 1.65
HDAC11-218ENST00000487585 POTECB2RU33 542 aa25.35■■□□□ 1.65
HDAC11-218ENST00000487585 SUSD4Q5VX71 490 aa25.35■■□□□ 1.65
HDAC11-218ENST00000487585 DNAJC5GQ8N7S2 189 aa25.35■■□□□ 1.65
HDAC11-218ENST00000487585 PROSER3Q2NL68 480 aa25.34■■□□□ 1.65
HDAC11-218ENST00000487585 NTSR2O95665 410 aa25.33■■□□□ 1.65
HDAC11-218ENST00000487585 FKBP4Q02790 459 aaKnown RBP eCLIP25.33■■□□□ 1.65
HDAC11-218ENST00000487585 PARP10Q53GL7 1025 aa25.33■■□□□ 1.65
HDAC11-218ENST00000487585 RTKN2Q8IZC4 609 aa25.33■■□□□ 1.65
HDAC11-218ENST00000487585 ANXA1P04083 346 aa25.32■■□□□ 1.64
HDAC11-218ENST00000487585 HOXA10P31260 410 aaPredicted RBP25.32■■□□□ 1.64
HDAC11-218ENST00000487585 SNED1Q8TER0 1413 aa25.31■■□□□ 1.64
HDAC11-218ENST00000487585 OLFM4Q6UX06 510 aa25.31■■□□□ 1.64
HDAC11-218ENST00000487585 PPP1R42Q7Z4L9 355 aa25.31■■□□□ 1.64
HDAC11-218ENST00000487585 ANKRD36CQ5JPF3 1778 aa25.29■■□□□ 1.64
HDAC11-218ENST00000487585 KRT24Q2M2I5 525 aa25.29■■□□□ 1.64
HDAC11-218ENST00000487585 COPS6Q7L5N1 327 aa25.29■■□□□ 1.64
HDAC11-218ENST00000487585 RPGRQ92834 1020 aaKnown RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms