RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 C21orf2O43822 256 aa32.41■■■□□ 2.78
LIME1-206ENST00000487026 TOMM70O94826 608 aa32.41■■■□□ 2.78
LIME1-206ENST00000487026 LMNB1P20700 586 aa32.41■■■□□ 2.78
LIME1-206ENST00000487026 NFKBIEO00221 500 aa32.4■■■□□ 2.78
LIME1-206ENST00000487026 HLFQ16534 295 aa32.4■■■□□ 2.78
LIME1-206ENST00000487026 NIP7Q9Y221 180 aaKnown RBP eCLIP32.4■■■□□ 2.78
LIME1-206ENST00000487026 FAM177BA6PVY3 158 aa32.39■■■□□ 2.78
LIME1-206ENST00000487026 RIPK4P57078 832 aa32.39■■■□□ 2.78
LIME1-206ENST00000487026 RRAGCQ9HB90 399 aa32.39■■■□□ 2.78
LIME1-206ENST00000487026 RRP7AQ9Y3A4 280 aaKnown RBP32.39■■■□□ 2.78
LIME1-206ENST00000487026 KDM2BQ8NHM5 1336 aa32.39■■■□□ 2.78
LIME1-206ENST00000487026 COL11A2P13942 1736 aaPredicted RBP32.39■■■□□ 2.78
LIME1-206ENST00000487026 KDM3BQ7LBC6 1761 aa32.39■■■□□ 2.78
LIME1-206ENST00000487026 SRGNP10124 158 aa32.36■■■□□ 2.77
LIME1-206ENST00000487026 MYBBP1AQ9BQG0 1328 aaKnown RBP32.35■■■□□ 2.77
LIME1-206ENST00000487026 STYK1Q6J9G0 422 aa32.35■■■□□ 2.77
LIME1-206ENST00000487026 MYL6BP14649 208 aa32.34■■■□□ 2.77
LIME1-206ENST00000487026 TPTE2Q6XPS3 522 aa32.34■■■□□ 2.77
LIME1-206ENST00000487026 C16orf71Q8IYS4 520 aaPredicted RBP32.34■■■□□ 2.77
LIME1-206ENST00000487026 CNKSR1Q969H4 720 aa32.34■■■□□ 2.77
LIME1-206ENST00000487026 MASTLQ96GX5 879 aa32.34■■■□□ 2.77
LIME1-206ENST00000487026 LAMB4A4D0S4 1761 aa32.34■■■□□ 2.77
LIME1-206ENST00000487026 CCDC146Q8IYE0 955 aa32.33■■■□□ 2.77
LIME1-206ENST00000487026 TSPYL4Q9UJ04 414 aa32.33■■■□□ 2.77
LIME1-206ENST00000487026 TMPOP42166 694 aaKnown RBP32.32■■■□□ 2.76
LIME1-206ENST00000487026 TTLL7Q6ZT98 887 aa32.32■■■□□ 2.76
LIME1-206ENST00000487026 RGL2O15211 777 aa32.31■■■□□ 2.76
LIME1-206ENST00000487026 PRPF40BQ6NWY9 871 aaKnown RBP32.31■■■□□ 2.76
LIME1-206ENST00000487026 CCDC88AQ3V6T2 1871 aa32.31■■■□□ 2.76
LIME1-206ENST00000487026 NEUROD2Q15784 382 aa32.3■■■□□ 2.76
LIME1-206ENST00000487026 SLX4Q8IY92 1834 aa32.3■■■□□ 2.76
LIME1-206ENST00000487026 ZC3H4Q9UPT8 1303 aaKnown RBP32.29■■■□□ 2.76
LIME1-206ENST00000487026 RBM46Q8TBY0 533 aaKnown RBP32.29■■■□□ 2.76
LIME1-206ENST00000487026 GLTPD2A6NH11 291 aa32.28■■■□□ 2.76
LIME1-206ENST00000487026 MAP3K15Q6ZN16 1313 aa32.27■■■□□ 2.76
LIME1-206ENST00000487026 ERVV-1B6SEH8 477 aa32.27■■■□□ 2.76
LIME1-206ENST00000487026 GTF2E1P29083 439 aaPredicted RBP32.27■■■□□ 2.76
LIME1-206ENST00000487026 KIF6Q6ZMV9 814 aa32.27■■■□□ 2.76
LIME1-206ENST00000487026 ZBTB3Q9H5J0 574 aa32.27■■■□□ 2.76
LIME1-206ENST00000487026 KLRG2A4D1S0 409 aaPredicted RBP32.26■■■□□ 2.75
LIME1-206ENST00000487026 NPR1P16066 1061 aa32.26■■■□□ 2.75
LIME1-206ENST00000487026 EIF2S2P20042 333 aaKnown RBP32.26■■■□□ 2.75
LIME1-206ENST00000487026 CACNA1SQ13698 1873 aa32.26■■■□□ 2.75
LIME1-206ENST00000487026 APLP1P51693 650 aa32.25■■■□□ 2.75
LIME1-206ENST00000487026 GPTP24298 496 aa32.24■■■□□ 2.75
LIME1-206ENST00000487026 ERFEQ4G0M1 354 aa32.24■■■□□ 2.75
LIME1-206ENST00000487026 NUTM1Q86Y26 1132 aa32.24■■■□□ 2.75
LIME1-206ENST00000487026 TAOK3Q9H2K8 898 aa32.24■■■□□ 2.75
LIME1-206ENST00000487026 FER1L6Q2WGJ9 1857 aa32.24■■■□□ 2.75
LIME1-206ENST00000487026 LMOD3Q0VAK6 560 aa32.23■■■□□ 2.75
LIME1-206ENST00000487026 WDR43Q15061 677 aaKnown RBP eCLIP32.23■■■□□ 2.75
LIME1-206ENST00000487026 C7orf43Q8WVR3 580 aa32.23■■■□□ 2.75
LIME1-206ENST00000487026 TNRC6CQ9HCJ0 1690 aaKnown RBP32.22■■■□□ 2.75
LIME1-206ENST00000487026 ADAMTS8Q9UP79 889 aa32.22■■■□□ 2.75
LIME1-206ENST00000487026 TIAM2Q8IVF5 1701 aa32.22■■■□□ 2.75
LIME1-206ENST00000487026 PDIA6Q15084 440 aa32.21■■■□□ 2.75
LIME1-206ENST00000487026 OLFM4Q6UX06 510 aa32.21■■■□□ 2.75
LIME1-206ENST00000487026 RUNDC1Q96C34 613 aa32.21■■■□□ 2.75
LIME1-206ENST00000487026 BABAM1Q9NWV8 329 aa32.21■■■□□ 2.75
LIME1-206ENST00000487026 LTBP3Q9NS15 1303 aa32.21■■■□□ 2.75
LIME1-206ENST00000487026 NUP98P52948 1817 aa32.21■■■□□ 2.75
LIME1-206ENST00000487026 ANXA1P04083 346 aa32.2■■■□□ 2.75
LIME1-206ENST00000487026 SOGA3Q5TF21 947 aa32.2■■■□□ 2.75
LIME1-206ENST00000487026 VEGFAP15692 232 aaPredicted RBP32.19■■■□□ 2.74
LIME1-206ENST00000487026 FSTL1Q12841 308 aa32.19■■■□□ 2.74
LIME1-206ENST00000487026 DPY19L2Q6NUT2 758 aa32.19■■■□□ 2.74
LIME1-206ENST00000487026 NECTIN2Q92692 538 aa32.19■■■□□ 2.74
LIME1-206ENST00000487026 NYXQ9GZU5 481 aa32.19■■■□□ 2.74
LIME1-206ENST00000487026 ERBB4Q15303 1308 aa32.19■■■□□ 2.74
LIME1-206ENST00000487026 UBN2Q6ZU65 1347 aa32.19■■■□□ 2.74
LIME1-206ENST00000487026 PROSER3Q2NL68 480 aa32.18■■■□□ 2.74
LIME1-206ENST00000487026 TRIM35Q9UPQ4 493 aa32.18■■■□□ 2.74
LIME1-206ENST00000487026 LAS1LQ9Y4W2 734 aaKnown RBP32.18■■■□□ 2.74
LIME1-206ENST00000487026 ABCC12Q96J65 1359 aa32.18■■■□□ 2.74
LIME1-206ENST00000487026 ARFGEF2Q9Y6D5 1785 aa32.17■■■□□ 2.74
LIME1-206ENST00000487026 SUSD4Q5VX71 490 aa32.17■■■□□ 2.74
LIME1-206ENST00000487026 LRP10Q7Z4F1 713 aa32.17■■■□□ 2.74
LIME1-206ENST00000487026 PRKRIP1Q9H875 184 aaPredicted RBP32.17■■■□□ 2.74
LIME1-206ENST00000487026 POTECB2RU33 542 aa32.16■■■□□ 2.74
LIME1-206ENST00000487026 HTRA3P83110 453 aa32.16■■■□□ 2.74
LIME1-206ENST00000487026 CCDC93Q567U6 631 aa32.16■■■□□ 2.74
LIME1-206ENST00000487026 GIGYF2Q6Y7W6 1299 aaKnown RBP32.16■■■□□ 2.74
LIME1-206ENST00000487026 ZNF34Q8IZ26 560 aa32.16■■■□□ 2.74
LIME1-206ENST00000487026 KRT24Q2M2I5 525 aa32.15■■■□□ 2.74
LIME1-206ENST00000487026 DICER1Q9UPY3 1922 aaKnown RBP32.14■■■□□ 2.74
LIME1-206ENST00000487026 CHL1O00533 1208 aa32.14■■■□□ 2.74
LIME1-206ENST00000487026 ALDH1B1P30837 517 aa32.14■■■□□ 2.74
LIME1-206ENST00000487026 DNAJC5GQ8N7S2 189 aa32.14■■■□□ 2.74
LIME1-206ENST00000487026 SMC1BQ8NDV3 1235 aa32.14■■■□□ 2.74
LIME1-206ENST00000487026 DDNO94850 711 aaPredicted RBP32.11■■■□□ 2.73
LIME1-206ENST00000487026 CRY2Q49AN0 593 aa32.11■■■□□ 2.73
LIME1-206ENST00000487026 ZNF277Q9NRM2 450 aaPredicted RBP32.11■■■□□ 2.73
LIME1-206ENST00000487026 NTSR2O95665 410 aa32.1■■■□□ 2.73
LIME1-206ENST00000487026 FKBP4Q02790 459 aaKnown RBP eCLIP32.1■■■□□ 2.731e-6■■□□□ 11.7
LIME1-206ENST00000487026 AIMP1Q12904 312 aaKnown RBP32.1■■■□□ 2.73
LIME1-206ENST00000487026 COPS6Q7L5N1 327 aa32.09■■■□□ 2.73
LIME1-206ENST00000487026 C3orf67Q6ZVT6 689 aa32.08■■■□□ 2.73
LIME1-206ENST00000487026 RTKN2Q8IZC4 609 aa32.08■■■□□ 2.73
LIME1-206ENST00000487026 XAGE3Q8WTP9 111 aa32.08■■■□□ 2.73
LIME1-206ENST00000487026 RPGRQ92834 1020 aaKnown RBP32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms