RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-208ENST00000486585 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
PCMT1-208ENST00000486585 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
PCMT1-208ENST00000486585 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
PCMT1-208ENST00000486585 ZNF219Q9P2Y4 722 aaPredicted RBP13.19□□□□□ -0.3
PCMT1-208ENST00000486585 COL11A2P13942 1736 aaPredicted RBP13.19□□□□□ -0.3
PCMT1-208ENST00000486585 BCORQ6W2J9 1755 aa13.18□□□□□ -0.3
PCMT1-208ENST00000486585 POTECB2RU33 542 aa13.18□□□□□ -0.3
PCMT1-208ENST00000486585 RGL2O15211 777 aa13.18□□□□□ -0.3
PCMT1-208ENST00000486585 CAMTA2O94983 1202 aa13.18□□□□□ -0.3
PCMT1-208ENST00000486585 A1BGP04217 495 aa13.18□□□□□ -0.3
PCMT1-208ENST00000486585 SRGNP10124 158 aa13.18□□□□□ -0.3
PCMT1-208ENST00000486585 PRPF40BQ6NWY9 871 aaKnown RBP13.18□□□□□ -0.3
PCMT1-208ENST00000486585 NUDCQ9Y266 331 aa13.18□□□□□ -0.3
PCMT1-208ENST00000486585 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
PCMT1-208ENST00000486585 NBPF5PQ86XG9 351 aaPredicted RBP13.17□□□□□ -0.3
PCMT1-208ENST00000486585 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
PCMT1-208ENST00000486585 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
PCMT1-208ENST00000486585 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
PCMT1-208ENST00000486585 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
PCMT1-208ENST00000486585 CAPN15O75808 1086 aa13.15□□□□□ -0.3
PCMT1-208ENST00000486585 DDNO94850 711 aaPredicted RBP13.15□□□□□ -0.3
PCMT1-208ENST00000486585 NPR1P16066 1061 aa13.15□□□□□ -0.3
PCMT1-208ENST00000486585 CCDC93Q567U6 631 aa13.15□□□□□ -0.3
PCMT1-208ENST00000486585 LDHDQ86WU2 507 aa13.15□□□□□ -0.3
PCMT1-208ENST00000486585 RTKN2Q8IZC4 609 aa13.15□□□□□ -0.3
PCMT1-208ENST00000486585 CCDC24Q8N4L8 307 aa13.15□□□□□ -0.3
PCMT1-208ENST00000486585 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
PCMT1-208ENST00000486585 L3MBTL3Q96JM7 780 aaPredicted RBP13.14□□□□□ -0.31
PCMT1-208ENST00000486585 USP16Q9Y5T5 823 aa13.14□□□□□ -0.31
PCMT1-208ENST00000486585 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
PCMT1-208ENST00000486585 ALDH1B1P30837 517 aa13.13□□□□□ -0.31
PCMT1-208ENST00000486585 KLRG2A4D1S0 409 aaPredicted RBP13.12□□□□□ -0.31
PCMT1-208ENST00000486585 GTF2E1P29083 439 aaPredicted RBP13.12□□□□□ -0.31
PCMT1-208ENST00000486585 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
PCMT1-208ENST00000486585 CNGB1Q14028 1251 aaPredicted RBP13.12□□□□□ -0.31
PCMT1-208ENST00000486585 C7orf43Q8WVR3 580 aa13.12□□□□□ -0.31
PCMT1-208ENST00000486585 PHACTR3Q96KR7 559 aa13.12□□□□□ -0.31
PCMT1-208ENST00000486585 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
PCMT1-208ENST00000486585 TAF1DQ9H5J8 278 aaPredicted RBP13.12□□□□□ -0.31
PCMT1-208ENST00000486585 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
PCMT1-208ENST00000486585 KCNQ3O43525 872 aa13.11□□□□□ -0.31
PCMT1-208ENST00000486585 U2AF1L5P0DN76 240 aaPredicted RBP13.11□□□□□ -0.31
PCMT1-208ENST00000486585 U2AF1Q01081 240 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCMT1-208ENST00000486585 PNMA8AQ86V59 439 aaPredicted RBP13.11□□□□□ -0.31
PCMT1-208ENST00000486585 AIDAQ96BJ3 306 aa13.11□□□□□ -0.31
PCMT1-208ENST00000486585 HACL1Q9UJ83 578 aa13.11□□□□□ -0.31
PCMT1-208ENST00000486585 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCMT1-208ENST00000486585 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
PCMT1-208ENST00000486585 TMEM88BA6NKF7 163 aa13.1□□□□□ -0.31
PCMT1-208ENST00000486585 NEFMP07197 916 aa13.1□□□□□ -0.31
PCMT1-208ENST00000486585 GRIPAP1Q4V328 841 aa13.1□□□□□ -0.31
PCMT1-208ENST00000486585 NYXQ9GZU5 481 aa13.1□□□□□ -0.31
PCMT1-208ENST00000486585 TAF7Q15545 349 aaPredicted RBP13.09□□□□□ -0.31
PCMT1-208ENST00000486585 CC2D2BQ6DHV5 1058 aa13.09□□□□□ -0.31
PCMT1-208ENST00000486585 PRDM10Q9NQV6 1147 aa13.09□□□□□ -0.31
PCMT1-208ENST00000486585 PASKQ96RG2 1323 aa13.09□□□□□ -0.31
PCMT1-208ENST00000486585 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
PCMT1-208ENST00000486585 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
PCMT1-208ENST00000486585 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
PCMT1-208ENST00000486585 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
PCMT1-208ENST00000486585 EAPPQ56P03 285 aaPredicted RBP13.08□□□□□ -0.32
PCMT1-208ENST00000486585 MCM10Q7L590 875 aa13.08□□□□□ -0.32
PCMT1-208ENST00000486585 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
PCMT1-208ENST00000486585 JDP2Q8WYK2 163 aa13.08□□□□□ -0.32
PCMT1-208ENST00000486585 ZNF277Q9NRM2 450 aaPredicted RBP13.08□□□□□ -0.32
PCMT1-208ENST00000486585 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
PCMT1-208ENST00000486585 NUP98P52948 1817 aa13.07□□□□□ -0.32
PCMT1-208ENST00000486585 ERVV-1B6SEH8 477 aa13.07□□□□□ -0.32
PCMT1-208ENST00000486585 EPHX2P34913 555 aa13.07□□□□□ -0.32
PCMT1-208ENST00000486585 IARSP41252 1262 aaKnown RBP13.07□□□□□ -0.32
PCMT1-208ENST00000486585 GPC2Q8N158 579 aa13.07□□□□□ -0.32
PCMT1-208ENST00000486585 PSMD1Q99460 953 aa13.07□□□□□ -0.32
PCMT1-208ENST00000486585 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
PCMT1-208ENST00000486585 PRAMEF22A3QJZ6 481 aa13.06□□□□□ -0.32
PCMT1-208ENST00000486585 FAM177BA6PVY3 158 aa13.06□□□□□ -0.32
PCMT1-208ENST00000486585 NBPF26B4DH59 902 aa13.06□□□□□ -0.32
PCMT1-208ENST00000486585 FZD9O00144 591 aa13.06□□□□□ -0.32
PCMT1-208ENST00000486585 ITGBL1O95965 494 aaPredicted RBP13.06□□□□□ -0.32
PCMT1-208ENST00000486585 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
PCMT1-208ENST00000486585 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
PCMT1-208ENST00000486585 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
PCMT1-208ENST00000486585 FOXN1O15353 648 aa13.05□□□□□ -0.32
PCMT1-208ENST00000486585 LMOD1P29536 600 aaPredicted RBP13.05□□□□□ -0.32
PCMT1-208ENST00000486585 VEGFBP49765 207 aa13.05□□□□□ -0.32
PCMT1-208ENST00000486585 EIF6P56537 245 aaKnown RBP13.05□□□□□ -0.32
PCMT1-208ENST00000486585 CRY2Q49AN0 593 aa13.05□□□□□ -0.32
PCMT1-208ENST00000486585 KIF6Q6ZMV9 814 aa13.05□□□□□ -0.32
PCMT1-208ENST00000486585 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
PCMT1-208ENST00000486585 RPGRQ92834 1020 aaKnown RBP13.05□□□□□ -0.32
PCMT1-208ENST00000486585 TMX4Q9H1E5 349 aaPredicted RBP13.05□□□□□ -0.32
PCMT1-208ENST00000486585 ZNF541Q9H0D2 1346 aa13.05□□□□□ -0.32
PCMT1-208ENST00000486585 DLG5Q8TDM6 1919 aa13.04□□□□□ -0.32
PCMT1-208ENST00000486585 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
PCMT1-208ENST00000486585 MAP2K1Q02750 393 aaPredicted RBP13.04□□□□□ -0.32
PCMT1-208ENST00000486585 HLFQ16534 295 aa13.04□□□□□ -0.32
PCMT1-208ENST00000486585 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
PCMT1-208ENST00000486585 ADAMTSL1Q8N6G6 1762 aa13.04□□□□□ -0.32
PCMT1-208ENST00000486585 RASSF10A6NK89 507 aa13.03□□□□□ -0.32
PCMT1-208ENST00000486585 HOXA10P31260 410 aaPredicted RBP13.03□□□□□ -0.32
PCMT1-208ENST00000486585 DCTN1Q14203 1278 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms