RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 PDZRN3Q9UPQ7 1066 aa13.51□□□□□ -0.25
PTPN7-213ENST00000486116 MAP2K2P36507 400 aa13.5□□□□□ -0.25
PTPN7-213ENST00000486116 MTHFSP49914 203 aa13.5□□□□□ -0.25
PTPN7-213ENST00000486116 CST9Q5W186 159 aa13.5□□□□□ -0.25
PTPN7-213ENST00000486116 CA12O43570 354 aa13.49□□□□□ -0.25
PTPN7-213ENST00000486116 PLEKHO1Q53GL0 409 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-213ENST00000486116 SOGA3Q5TF21 947 aa13.49□□□□□ -0.25
PTPN7-213ENST00000486116 TBC1D9BQ66K14 1250 aa13.49□□□□□ -0.25
PTPN7-213ENST00000486116 CARD14Q9BXL6 1004 aa13.49□□□□□ -0.25
PTPN7-213ENST00000486116 TLL2Q9Y6L7 1015 aa13.49□□□□□ -0.25
PTPN7-213ENST00000486116 STYK1Q6J9G0 422 aa13.48□□□□□ -0.25
PTPN7-213ENST00000486116 C7orf43Q8WVR3 580 aa13.48□□□□□ -0.25
PTPN7-213ENST00000486116 CNKSR1Q969H4 720 aa13.48□□□□□ -0.25
PTPN7-213ENST00000486116 POLKQ9UBT6 870 aa13.48□□□□□ -0.25
PTPN7-213ENST00000486116 MRC1P22897 1456 aa13.48□□□□□ -0.25
PTPN7-213ENST00000486116 COL4A5P29400 1685 aa13.47□□□□□ -0.25
PTPN7-213ENST00000486116 TRAF5O00463 557 aa13.47□□□□□ -0.25
PTPN7-213ENST00000486116 SRGNP10124 158 aa13.47□□□□□ -0.25
PTPN7-213ENST00000486116 ZNF277Q9NRM2 450 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-213ENST00000486116 FZD9O00144 591 aa13.46□□□□□ -0.25
PTPN7-213ENST00000486116 BRPF1P55201 1214 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-213ENST00000486116 FKBP4Q02790 459 aaKnown RBP eCLIP13.46□□□□□ -0.25
PTPN7-213ENST00000486116 AMOTQ4VCS5 1084 aa13.46□□□□□ -0.25
PTPN7-213ENST00000486116 CCDC93Q567U6 631 aa13.46□□□□□ -0.25
PTPN7-213ENST00000486116 GPC2Q8N158 579 aa13.45□□□□□ -0.26
PTPN7-213ENST00000486116 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
PTPN7-213ENST00000486116 CANXP27824 592 aaKnown RBP13.44□□□□□ -0.26
PTPN7-213ENST00000486116 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
PTPN7-213ENST00000486116 CIAPIN1Q6FI81 312 aa13.44□□□□□ -0.26
PTPN7-213ENST00000486116 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
PTPN7-213ENST00000486116 AKAP11Q9UKA4 1901 aa13.44□□□□□ -0.26
PTPN7-213ENST00000486116 EIF5P55010 431 aaKnown RBP13.43□□□□□ -0.26
PTPN7-213ENST00000486116 SLC39A6Q13433 755 aa13.43□□□□□ -0.26
PTPN7-213ENST00000486116 SAPCD2Q86UD0 394 aa13.43□□□□□ -0.26
PTPN7-213ENST00000486116 SNED1Q8TER0 1413 aa13.42□□□□□ -0.26
PTPN7-213ENST00000486116 SLC24A1O60721 1099 aa13.42□□□□□ -0.26
PTPN7-213ENST00000486116 IARSP41252 1262 aaKnown RBP13.42□□□□□ -0.26
PTPN7-213ENST00000486116 AEBP1Q8IUX7 1158 aa13.42□□□□□ -0.26
PTPN7-213ENST00000486116 CNBD1Q8NA66 436 aa13.42□□□□□ -0.26
PTPN7-213ENST00000486116 SLC52A2Q9HAB3 445 aa13.42□□□□□ -0.26
PTPN7-213ENST00000486116 EPS15P42566 896 aa13.41□□□□□ -0.26
PTPN7-213ENST00000486116 SCNN1DP51172 638 aa13.41□□□□□ -0.26
PTPN7-213ENST00000486116 ZIC5Q96T25 663 aa13.41□□□□□ -0.26
PTPN7-213ENST00000486116 ST5P78524 1137 aa13.4□□□□□ -0.26
PTPN7-213ENST00000486116 HHIPL1Q96JK4 782 aa13.4□□□□□ -0.26
PTPN7-213ENST00000486116 GJA3Q9Y6H8 435 aa13.4□□□□□ -0.26
PTPN7-213ENST00000486116 A0A087WZG4 1122 aa13.39□□□□□ -0.27
PTPN7-213ENST00000486116 LMOD1P29536 600 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-213ENST00000486116 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
PTPN7-213ENST00000486116 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
PTPN7-213ENST00000486116 LGR6Q9HBX8 967 aa13.39□□□□□ -0.27
PTPN7-213ENST00000486116 TBC1D2BQ9UPU7 963 aa13.39□□□□□ -0.27
PTPN7-213ENST00000486116 SIPA1L3O60292 1781 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-213ENST00000486116 CELF2O95319 508 aaKnown RBP13.38□□□□□ -0.27
PTPN7-213ENST00000486116 TNNT2P45379 298 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-213ENST00000486116 USP50Q70EL3 339 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-213ENST00000486116 RTKN2Q8IZC4 609 aa13.38□□□□□ -0.27
PTPN7-213ENST00000486116 SETDB2Q96T68 719 aa13.38□□□□□ -0.27
PTPN7-213ENST00000486116 NPHP1O15259 732 aa13.37□□□□□ -0.27
PTPN7-213ENST00000486116 NPR1P16066 1061 aa13.37□□□□□ -0.27
PTPN7-213ENST00000486116 HABP4Q5JVS0 413 aaKnown RBP13.37□□□□□ -0.27
PTPN7-213ENST00000486116 GCC1Q96CN9 775 aa13.37□□□□□ -0.27
PTPN7-213ENST00000486116 CAMTA2O94983 1202 aa13.36□□□□□ -0.27
PTPN7-213ENST00000486116 EIF6P56537 245 aaKnown RBP13.36□□□□□ -0.27
PTPN7-213ENST00000486116 AKAP4Q5JQC9 854 aa13.36□□□□□ -0.27
PTPN7-213ENST00000486116 KLRG2A4D1S0 409 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-213ENST00000486116 NOGQ13253 232 aa13.35□□□□□ -0.27
PTPN7-213ENST00000486116 JDP2Q8WYK2 163 aa13.35□□□□□ -0.27
PTPN7-213ENST00000486116 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-213ENST00000486116 ZNF330Q9Y3S2 320 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-213ENST00000486116 RNMTO43148 476 aaKnown RBP13.34□□□□□ -0.27
PTPN7-213ENST00000486116 STARD3NLO95772 234 aa13.34□□□□□ -0.27
PTPN7-213ENST00000486116 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
PTPN7-213ENST00000486116 PSMD1Q99460 953 aa13.34□□□□□ -0.27
PTPN7-213ENST00000486116 SAGE1Q9NXZ1 904 aa13.34□□□□□ -0.27
PTPN7-213ENST00000486116 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
PTPN7-213ENST00000486116 IL6STP40189 918 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-213ENST00000486116 SULT6B1Q6IMI4 303 aa13.33□□□□□ -0.28
PTPN7-213ENST00000486116 ZNF408Q9H9D4 720 aa13.33□□□□□ -0.28
PTPN7-213ENST00000486116 HPS5Q9UPZ3 1129 aa13.33□□□□□ -0.28
PTPN7-213ENST00000486116 FAM155AB1AL88 458 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-213ENST00000486116 CTU1Q7Z7A3 348 aaKnown RBP13.32□□□□□ -0.28
PTPN7-213ENST00000486116 ADARB2Q9NS39 739 aaKnown RBP13.32□□□□□ -0.28
PTPN7-213ENST00000486116 NBPF5PQ86XG9 351 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-213ENST00000486116 RNF186Q9NXI6 227 aa13.31□□□□□ -0.28
PTPN7-213ENST00000486116 GPRC5DQ9NZD1 345 aa13.31□□□□□ -0.28
PTPN7-213ENST00000486116 PGAP2Q9UHJ9 254 aa13.31□□□□□ -0.28
PTPN7-213ENST00000486116 HEG1Q9ULI3 1381 aa13.31□□□□□ -0.28
PTPN7-213ENST00000486116 TRPA1O75762 1119 aa13.3□□□□□ -0.28
PTPN7-213ENST00000486116 FXR1P51114 621 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTPN7-213ENST00000486116 CDCA8Q53HL2 280 aa13.3□□□□□ -0.28
PTPN7-213ENST00000486116 SLC51AQ86UW1 340 aa13.3□□□□□ -0.28
PTPN7-213ENST00000486116 A1BGP04217 495 aa13.29□□□□□ -0.28
PTPN7-213ENST00000486116 HUNKP57058 714 aa13.29□□□□□ -0.28
PTPN7-213ENST00000486116 DZIP3Q86Y13 1208 aaKnown RBP13.29□□□□□ -0.28
PTPN7-213ENST00000486116 ZNF496Q96IT1 587 aaPredicted RBP13.29□□□□□ -0.28
PTPN7-213ENST00000486116 RBBP6Q7Z6E9 1792 aaKnown RBP13.28□□□□□ -0.28
PTPN7-213ENST00000486116 ALDH1B1P30837 517 aa13.28□□□□□ -0.28
PTPN7-213ENST00000486116 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
PTPN7-213ENST00000486116 LARGE2Q8N3Y3 721 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms