RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 CHL1O00533 1208 aa24.11■■□□□ 1.45
PRPF40A-209ENST00000486100 HLFQ16534 295 aa24.11■■□□□ 1.45
PRPF40A-209ENST00000486100 NBPF5PQ86XG9 351 aaPredicted RBP24.11■■□□□ 1.45
PRPF40A-209ENST00000486100 NIP7Q9Y221 180 aaKnown RBP eCLIP24.11■■□□□ 1.45
PRPF40A-209ENST00000486100 BRCA1P38398 1863 aaKnown RBP24.11■■□□□ 1.45
PRPF40A-209ENST00000486100 ERBB4Q15303 1308 aa24.1■■□□□ 1.45
PRPF40A-209ENST00000486100 MYL6BP14649 208 aa24.1■■□□□ 1.45
PRPF40A-209ENST00000486100 TPTE2Q6XPS3 522 aa24.09■■□□□ 1.45
PRPF40A-209ENST00000486100 ZNF526Q8TF50 670 aaPredicted RBP24.09■■□□□ 1.45
PRPF40A-209ENST00000486100 ZNF622Q969S3 477 aaKnown RBP eCLIP24.09■■□□□ 1.453e-21■■□□□ 14.1
PRPF40A-209ENST00000486100 EIF2S2P20042 333 aaKnown RBP24.08■■□□□ 1.45
PRPF40A-209ENST00000486100 C9orf131Q5VYM1 1079 aa24.08■■□□□ 1.45
PRPF40A-209ENST00000486100 TTLL7Q6ZT98 887 aa24.08■■□□□ 1.45
PRPF40A-209ENST00000486100 MAP3K15Q6ZN16 1313 aa24.08■■□□□ 1.44
PRPF40A-209ENST00000486100 KIF6Q6ZMV9 814 aa24.07■■□□□ 1.44
PRPF40A-209ENST00000486100 LAS1LQ9Y4W2 734 aaKnown RBP24.07■■□□□ 1.44
PRPF40A-209ENST00000486100 PDIA6Q15084 440 aa24.06■■□□□ 1.44
PRPF40A-209ENST00000486100 BCORQ6W2J9 1755 aa24.06■■□□□ 1.44
PRPF40A-209ENST00000486100 APAF1O14727 1248 aa24.05■■□□□ 1.44
PRPF40A-209ENST00000486100 SRGNP10124 158 aa24.05■■□□□ 1.44
PRPF40A-209ENST00000486100 ARFGEF1Q9Y6D6 1849 aa24.05■■□□□ 1.44
PRPF40A-209ENST00000486100 LAMB4A4D0S4 1761 aa24.04■■□□□ 1.44
PRPF40A-209ENST00000486100 STYK1Q6J9G0 422 aa24.04■■□□□ 1.44
PRPF40A-209ENST00000486100 LRP10Q7Z4F1 713 aa24.04■■□□□ 1.44
PRPF40A-209ENST00000486100 MASTLQ96GX5 879 aa24.04■■□□□ 1.44
PRPF40A-209ENST00000486100 CFAP44Q96MT7 982 aa24.04■■□□□ 1.44
PRPF40A-209ENST00000486100 FAM177BA6PVY3 158 aa24.03■■□□□ 1.44
PRPF40A-209ENST00000486100 CCDC184Q52MB2 194 aa24.03■■□□□ 1.44
PRPF40A-209ENST00000486100 CNKSR1Q969H4 720 aa24.03■■□□□ 1.44
PRPF40A-209ENST00000486100 ZBTB3Q9H5J0 574 aa24.03■■□□□ 1.44
PRPF40A-209ENST00000486100 RNF181Q9P0P0 153 aa24.03■■□□□ 1.44
PRPF40A-209ENST00000486100 KLRG2A4D1S0 409 aaPredicted RBP24.02■■□□□ 1.44
PRPF40A-209ENST00000486100 GTF2E1P29083 439 aaPredicted RBP24.01■■□□□ 1.43
PRPF40A-209ENST00000486100 KRT24Q2M2I5 525 aa24.01■■□□□ 1.43
PRPF40A-209ENST00000486100 GIGYF2Q6Y7W6 1299 aaKnown RBP24.01■■□□□ 1.43
PRPF40A-209ENST00000486100 NYXQ9GZU5 481 aa24.01■■□□□ 1.43
PRPF40A-209ENST00000486100 C21orf2O43822 256 aa24■■□□□ 1.43
PRPF40A-209ENST00000486100 RASSF7Q02833 373 aa24■■□□□ 1.43
PRPF40A-209ENST00000486100 PROSER3Q2NL68 480 aa24■■□□□ 1.43
PRPF40A-209ENST00000486100 NECTIN2Q92692 538 aa24■■□□□ 1.43
PRPF40A-209ENST00000486100 ANKRD31Q8N7Z5 1873 aa23.99■■□□□ 1.43
PRPF40A-209ENST00000486100 ANP32CO43423 234 aa23.99■■□□□ 1.43
PRPF40A-209ENST00000486100 ANXA1P04083 346 aa23.99■■□□□ 1.43
PRPF40A-209ENST00000486100 LMNB1P20700 586 aa23.99■■□□□ 1.43
PRPF40A-209ENST00000486100 ZNF34Q8IZ26 560 aa23.99■■□□□ 1.43
PRPF40A-209ENST00000486100 KIF3CO14782 793 aa23.98■■□□□ 1.43
PRPF40A-209ENST00000486100 HOXB7P09629 217 aa23.98■■□□□ 1.43
PRPF40A-209ENST00000486100 ZNF853P0CG23 659 aa23.98■■□□□ 1.43
PRPF40A-209ENST00000486100 NPR1P16066 1061 aa23.98■■□□□ 1.43
PRPF40A-209ENST00000486100 CALD1Q05682 793 aaKnown RBP23.98■■□□□ 1.43
PRPF40A-209ENST00000486100 DDX21Q9NR30 783 aaKnown RBP eCLIP23.98■■□□□ 1.43
PRPF40A-209ENST00000486100 ZNF219Q9P2Y4 722 aaPredicted RBP23.98■■□□□ 1.43
PRPF40A-209ENST00000486100 DLEC1Q9Y238 1755 aa23.98■■□□□ 1.43
PRPF40A-209ENST00000486100 NFKBIEO00221 500 aa23.97■■□□□ 1.43
PRPF40A-209ENST00000486100 GPTP24298 496 aa23.97■■□□□ 1.43
PRPF40A-209ENST00000486100 PRPF40BQ6NWY9 871 aaKnown RBP23.97■■□□□ 1.43
PRPF40A-209ENST00000486100 COPS6Q7L5N1 327 aa23.97■■□□□ 1.43
PRPF40A-209ENST00000486100 MBIPQ9NS73 344 aa23.97■■□□□ 1.43
PRPF40A-209ENST00000486100 UBN2Q6ZU65 1347 aa23.96■■□□□ 1.43
PRPF40A-209ENST00000486100 PRELPP51888 382 aa23.96■■□□□ 1.43
PRPF40A-209ENST00000486100 SUSD4Q5VX71 490 aa23.96■■□□□ 1.43
PRPF40A-209ENST00000486100 NUTM1Q86Y26 1132 aa23.96■■□□□ 1.43
PRPF40A-209ENST00000486100 IFT57Q9NWB7 429 aa23.96■■□□□ 1.43
PRPF40A-209ENST00000486100 GNAI1P63096 354 aa23.95■■□□□ 1.42
PRPF40A-209ENST00000486100 HDGFL1Q5TGJ6 251 aa23.95■■□□□ 1.42
PRPF40A-209ENST00000486100 XAGE3Q8WTP9 111 aa23.95■■□□□ 1.42
PRPF40A-209ENST00000486100 ZC3H4Q9UPT8 1303 aaKnown RBP23.94■■□□□ 1.42
PRPF40A-209ENST00000486100 AIMP1Q12904 312 aaKnown RBP23.94■■□□□ 1.42
PRPF40A-209ENST00000486100 ERFEQ4G0M1 354 aa23.94■■□□□ 1.42
PRPF40A-209ENST00000486100 PARP10Q53GL7 1025 aa23.94■■□□□ 1.42
PRPF40A-209ENST00000486100 SOGA3Q5TF21 947 aa23.94■■□□□ 1.42
PRPF40A-209ENST00000486100 DUSP27Q5VZP5 1158 aa23.94■■□□□ 1.42
PRPF40A-209ENST00000486100 IBTKQ9P2D0 1353 aaPredicted RBP23.93■■□□□ 1.42
PRPF40A-209ENST00000486100 SENP3-EIF4A1A0A087X0R7 540 aa23.93■■□□□ 1.42
PRPF40A-209ENST00000486100 ALDH1B1P30837 517 aa23.93■■□□□ 1.42
PRPF40A-209ENST00000486100 PPP1R42Q7Z4L9 355 aa23.93■■□□□ 1.42
PRPF40A-209ENST00000486100 C7orf43Q8WVR3 580 aa23.93■■□□□ 1.42
PRPF40A-209ENST00000486100 NMRK2Q9NPI5 230 aa23.93■■□□□ 1.42
PRPF40A-209ENST00000486100 CHPF2Q9P2E5 772 aa23.93■■□□□ 1.42
PRPF40A-209ENST00000486100 KDM2BQ8NHM5 1336 aa23.92■■□□□ 1.42
PRPF40A-209ENST00000486100 MRS2Q9HD23 443 aa23.92■■□□□ 1.42
PRPF40A-209ENST00000486100 DBF4Q9UBU7 674 aaPredicted RBP23.92■■□□□ 1.42
PRPF40A-209ENST00000486100 COL11A2P13942 1736 aaPredicted RBP23.91■■□□□ 1.42
PRPF40A-209ENST00000486100 NTSR2O95665 410 aa23.91■■□□□ 1.42
PRPF40A-209ENST00000486100 CRY2Q49AN0 593 aa23.91■■□□□ 1.42
PRPF40A-209ENST00000486100 HSP90AB3PQ58FF7 597 aa23.91■■□□□ 1.42
PRPF40A-209ENST00000486100 ABCC12Q96J65 1359 aa23.91■■□□□ 1.42
PRPF40A-209ENST00000486100 LTBP3Q9NS15 1303 aa23.9■■□□□ 1.42
PRPF40A-209ENST00000486100 TAOK3Q9H2K8 898 aa23.9■■□□□ 1.42
PRPF40A-209ENST00000486100 TCIRG1Q13488 830 aa23.89■■□□□ 1.41
PRPF40A-209ENST00000486100 UTP14AQ9BVJ6 771 aaKnown RBP23.89■■□□□ 1.41
PRPF40A-209ENST00000486100 NUP98P52948 1817 aa23.89■■□□□ 1.41
PRPF40A-209ENST00000486100 TOMM70O94826 608 aa23.88■■□□□ 1.41
PRPF40A-209ENST00000486100 CCDC27Q2M243 656 aa23.88■■□□□ 1.41
PRPF40A-209ENST00000486100 CCDC93Q567U6 631 aa23.88■■□□□ 1.41
PRPF40A-209ENST00000486100 HYPKQ9NX55 129 aa23.88■■□□□ 1.41
PRPF40A-209ENST00000486100 RIC1Q4ADV7 1423 aa23.87■■□□□ 1.41
PRPF40A-209ENST00000486100 GLTPD2A6NH11 291 aa23.87■■□□□ 1.41
PRPF40A-209ENST00000486100 HOXA10P31260 410 aaPredicted RBP23.87■■□□□ 1.41
PRPF40A-209ENST00000486100 SLC10A5Q5PT55 438 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms