RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 MAP3K15Q6ZN16 1313 aa30.37■■■□□ 2.45
ABCF3-216ENST00000485921 ERVV-1B6SEH8 477 aa30.36■■■□□ 2.45
ABCF3-216ENST00000485921 SLC4A2P04920 1241 aa30.36■■■□□ 2.45
ABCF3-216ENST00000485921 PHAXQ9H814 394 aaKnown RBP30.36■■■□□ 2.45
ABCF3-216ENST00000485921 COL24A1Q17RW2 1714 aa30.36■■■□□ 2.45
ABCF3-216ENST00000485921 MMP10P09238 476 aa30.35■■■□□ 2.45
ABCF3-216ENST00000485921 YTHDC1Q96MU7 727 aaKnown RBP30.35■■■□□ 2.45
ABCF3-216ENST00000485921 ZBTB3Q9H5J0 574 aa30.35■■■□□ 2.45
ABCF3-216ENST00000485921 ZNF652Q9Y2D9 606 aa30.35■■■□□ 2.45
ABCF3-216ENST00000485921 SCN7AQ01118 1682 aa30.35■■■□□ 2.45
ABCF3-216ENST00000485921 RGL2O15211 777 aa30.34■■■□□ 2.45
ABCF3-216ENST00000485921 HLFQ16534 295 aa30.34■■■□□ 2.45
ABCF3-216ENST00000485921 CLEC4GQ6UXB4 293 aa30.34■■■□□ 2.45
ABCF3-216ENST00000485921 CT47B1P0C2W7 299 aaPredicted RBP30.33■■■□□ 2.45
ABCF3-216ENST00000485921 TM4SF1P30408 202 aa30.32■■■□□ 2.44
ABCF3-216ENST00000485921 NFIXQ14938 502 aa30.32■■■□□ 2.44
ABCF3-216ENST00000485921 TBC1D9BQ66K14 1250 aa30.32■■■□□ 2.44
ABCF3-216ENST00000485921 BICDL1Q6ZP65 573 aa30.32■■■□□ 2.44
ABCF3-216ENST00000485921 BCORQ6W2J9 1755 aa30.32■■■□□ 2.44
ABCF3-216ENST00000485921 ZNF428Q96B54 188 aa30.31■■■□□ 2.44
ABCF3-216ENST00000485921 LRP5O75197 1615 aa30.3■■■□□ 2.44
ABCF3-216ENST00000485921 ANKRD13DQ6ZTN6 518 aa30.3■■■□□ 2.44
ABCF3-216ENST00000485921 G2E3Q7L622 706 aa30.3■■■□□ 2.44
ABCF3-216ENST00000485921 PARP3Q9Y6F1 533 aa30.3■■■□□ 2.44
ABCF3-216ENST00000485921 DDR1Q08345 913 aa30.29■■■□□ 2.44
ABCF3-216ENST00000485921 PLBD2Q8NHP8 589 aa30.29■■■□□ 2.44
ABCF3-216ENST00000485921 PPP1R1BQ9UD71 204 aaPredicted RBP30.29■■■□□ 2.44
ABCF3-216ENST00000485921 GIGYF2Q6Y7W6 1299 aaKnown RBP30.28■■■□□ 2.44
ABCF3-216ENST00000485921 POLRMTO00411 1230 aaKnown RBP30.27■■■□□ 2.44
ABCF3-216ENST00000485921 SETDB2Q96T68 719 aa30.27■■■□□ 2.44
ABCF3-216ENST00000485921 DDX58O95786 925 aaKnown RBP30.26■■■□□ 2.43
ABCF3-216ENST00000485921 SSH1Q8WYL5 1049 aa30.26■■■□□ 2.43
ABCF3-216ENST00000485921 NIP7Q9Y221 180 aaKnown RBP eCLIP30.26■■■□□ 2.43
ABCF3-216ENST00000485921 FLIIQ13045 1269 aa30.25■■■□□ 2.43
ABCF3-216ENST00000485921 ALDH1L2Q3SY69 923 aa30.25■■■□□ 2.43
ABCF3-216ENST00000485921 RIC3Q7Z5B4 369 aa30.25■■■□□ 2.43
ABCF3-216ENST00000485921 SRCAPQ6ZRS2 3230 aa30.25■■■□□ 2.43
ABCF3-216ENST00000485921 MRPL50Q8N5N7 158 aaKnown RBP30.24■■■□□ 2.43
ABCF3-216ENST00000485921 CACNA1FO60840 1977 aa30.24■■■□□ 2.43
ABCF3-216ENST00000485921 HSP90AB3PQ58FF7 597 aa30.23■■■□□ 2.43
ABCF3-216ENST00000485921 NUP98P52948 1817 aa30.23■■■□□ 2.43
ABCF3-216ENST00000485921 ATP10DQ9P241 1426 aa30.22■■■□□ 2.43
ABCF3-216ENST00000485921 SERPINB2P05120 415 aa30.22■■■□□ 2.43
ABCF3-216ENST00000485921 TCIRG1Q13488 830 aa30.22■■■□□ 2.43
ABCF3-216ENST00000485921 BCL2L13Q9BXK5 485 aa30.22■■■□□ 2.43
ABCF3-216ENST00000485921 CARMIL3Q8ND23 1372 aa30.22■■■□□ 2.43
ABCF3-216ENST00000485921 GPTP24298 496 aa30.21■■■□□ 2.43
ABCF3-216ENST00000485921 FKBP5Q13451 457 aaPredicted RBP30.21■■■□□ 2.43
ABCF3-216ENST00000485921 KSR2Q6VAB6 950 aa30.21■■■□□ 2.43
ABCF3-216ENST00000485921 ZNF34Q8IZ26 560 aa30.21■■■□□ 2.43
ABCF3-216ENST00000485921 SMC4Q9NTJ3 1288 aa30.21■■■□□ 2.43
ABCF3-216ENST00000485921 PI4KAP2A4QPH2 592 aa30.2■■■□□ 2.43
ABCF3-216ENST00000485921 PI4KAP1Q8N8J0 262 aa30.2■■■□□ 2.43
ABCF3-216ENST00000485921 RARSP54136 660 aaKnown RBP30.19■■■□□ 2.42
ABCF3-216ENST00000485921 KLHL34Q8N239 644 aa30.19■■■□□ 2.42
ABCF3-216ENST00000485921 MAP3K2Q9Y2U5 619 aa30.19■■■□□ 2.42
ABCF3-216ENST00000485921 ADCY9O60503 1353 aa30.17■■■□□ 2.42
ABCF3-216ENST00000485921 NBPF5PQ86XG9 351 aaPredicted RBP30.17■■■□□ 2.42
ABCF3-216ENST00000485921 FHDC1Q9C0D6 1143 aaPredicted RBP30.17■■■□□ 2.42
ABCF3-216ENST00000485921 UBN2Q6ZU65 1347 aa30.17■■■□□ 2.42
ABCF3-216ENST00000485921 FAM177BA6PVY3 158 aa30.16■■■□□ 2.42
ABCF3-216ENST00000485921 METTL22Q9BUU2 404 aaPredicted RBP30.16■■■□□ 2.42
ABCF3-216ENST00000485921 ARFGEF2Q9Y6D5 1785 aa30.15■■■□□ 2.42
ABCF3-216ENST00000485921 ATP5J2-PTCD1G3V325 749 aa30.15■■■□□ 2.42
ABCF3-216ENST00000485921 PARP10Q53GL7 1025 aa30.15■■■□□ 2.42
ABCF3-216ENST00000485921 MYD88Q99836 296 aa30.15■■■□□ 2.42
ABCF3-216ENST00000485921 NPHP1O15259 732 aa30.14■■■□□ 2.42
ABCF3-216ENST00000485921 SUSD4Q5VX71 490 aa30.14■■■□□ 2.42
ABCF3-216ENST00000485921 TPTE2Q6XPS3 522 aa30.14■■■□□ 2.42
ABCF3-216ENST00000485921 CNBD1Q8NA66 436 aa30.14■■■□□ 2.42
ABCF3-216ENST00000485921 ISCA1Q9BUE6 129 aa30.14■■■□□ 2.42
ABCF3-216ENST00000485921 CD2APQ9Y5K6 639 aa30.14■■■□□ 2.42
ABCF3-216ENST00000485921 AFDNP55196 1824 aaKnown RBP30.13■■■□□ 2.41
ABCF3-216ENST00000485921 PRR5LQ6MZQ0 368 aa30.13■■■□□ 2.41
ABCF3-216ENST00000485921 NLRP10Q86W26 655 aa30.13■■■□□ 2.41
ABCF3-216ENST00000485921 DNAAF4Q8WXU2 420 aa30.13■■■□□ 2.41
ABCF3-216ENST00000485921 BRPF1P55201 1214 aaPredicted RBP30.12■■■□□ 2.41
ABCF3-216ENST00000485921 PPP1R42Q7Z4L9 355 aa30.12■■■□□ 2.41
ABCF3-216ENST00000485921 NYXQ9GZU5 481 aa30.12■■■□□ 2.41
ABCF3-216ENST00000485921 NRXN2Q9P2S2 1712 aa30.12■■■□□ 2.41
ABCF3-216ENST00000485921 PTPRCP08575 1304 aa30.12■■■□□ 2.41
ABCF3-216ENST00000485921 ANKRD36CQ5JPF3 1778 aa30.12■■■□□ 2.41
ABCF3-216ENST00000485921 F6X3S4 739 aa30.11■■■□□ 2.41
ABCF3-216ENST00000485921 TRIM28Q13263 835 aaKnown RBP30.11■■■□□ 2.41
ABCF3-216ENST00000485921 CCDC24Q8N4L8 307 aa30.11■■■□□ 2.41
ABCF3-216ENST00000485921 SYT17Q9BSW7 474 aa30.11■■■□□ 2.41
ABCF3-216ENST00000485921 C10orf71Q711Q0 1435 aa30.11■■■□□ 2.41
ABCF3-216ENST00000485921 NEXNQ0ZGT2 675 aa30.1■■■□□ 2.41
ABCF3-216ENST00000485921 UTP14AQ9BVJ6 771 aaKnown RBP30.1■■■□□ 2.41
ABCF3-216ENST00000485921 BCAR3O75815 825 aa30.09■■■□□ 2.41
ABCF3-216ENST00000485921 GTF2E1P29083 439 aaPredicted RBP30.09■■■□□ 2.41
ABCF3-216ENST00000485921 ST5P78524 1137 aa30.09■■■□□ 2.41
ABCF3-216ENST00000485921 IBTKQ9P2D0 1353 aaPredicted RBP30.09■■■□□ 2.41
ABCF3-216ENST00000485921 NOB1Q9ULX3 412 aaKnown RBP30.09■■■□□ 2.41
ABCF3-216ENST00000485921 NTSR2O95665 410 aa30.08■■■□□ 2.41
ABCF3-216ENST00000485921 NUTM1Q86Y26 1132 aa30.07■■■□□ 2.4
ABCF3-216ENST00000485921 IGKV5-2P06315 115 aa30.06■■■□□ 2.4
ABCF3-216ENST00000485921 ERFEQ4G0M1 354 aa30.06■■■□□ 2.4
ABCF3-216ENST00000485921 CCDC191Q8NCU4 936 aa30.06■■■□□ 2.4
ABCF3-216ENST00000485921 NLGN2Q8NFZ4 835 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms