RNA–Protein interactions for RNA: ENST00000484750.1

COL23A1-203, Transcript of collagen type XXIII alpha 1 chain, humanhuman

TSL 4

Gene COL23A1, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-203ENST00000484750 PASKQ96RG2 1323 aa16.61■□□□□ 0.25
COL23A1-203ENST00000484750 A1BGP04217 495 aa16.6■□□□□ 0.25
COL23A1-203ENST00000484750 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
COL23A1-203ENST00000484750 STYK1Q6J9G0 422 aa16.6■□□□□ 0.25
COL23A1-203ENST00000484750 PRPF40BQ6NWY9 871 aaKnown RBP16.6■□□□□ 0.25
COL23A1-203ENST00000484750 NUDCQ9Y266 331 aa16.6■□□□□ 0.25
COL23A1-203ENST00000484750 KCNQ3O43525 872 aa16.59■□□□□ 0.25
COL23A1-203ENST00000484750 TEX13AQ9BXU3 409 aaPredicted RBP16.59■□□□□ 0.25
COL23A1-203ENST00000484750 MKRN1Q9UHC7 482 aaKnown RBP16.59■□□□□ 0.25
COL23A1-203ENST00000484750 CNTNAP1P78357 1384 aa16.59■□□□□ 0.25
COL23A1-203ENST00000484750 GNAT3A8MTJ3 354 aa16.58■□□□□ 0.24
COL23A1-203ENST00000484750 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.24
COL23A1-203ENST00000484750 CNBD1Q8NA66 436 aa16.58■□□□□ 0.24
COL23A1-203ENST00000484750 CNKSR1Q969H4 720 aa16.58■□□□□ 0.24
COL23A1-203ENST00000484750 L3MBTL3Q96JM7 780 aaPredicted RBP16.58■□□□□ 0.24
COL23A1-203ENST00000484750 SNED1Q8TER0 1413 aa16.58■□□□□ 0.24
COL23A1-203ENST00000484750 TEFQ10587 303 aa16.57■□□□□ 0.24
COL23A1-203ENST00000484750 RALBP1Q15311 655 aa16.57■□□□□ 0.24
COL23A1-203ENST00000484750 GAS2L2Q8NHY3 880 aa16.57■□□□□ 0.24
COL23A1-203ENST00000484750 SETDB2Q96T68 719 aa16.57■□□□□ 0.24
COL23A1-203ENST00000484750 ZNF330Q9Y3S2 320 aaPredicted RBP16.57■□□□□ 0.24
COL23A1-203ENST00000484750 FOXN1O15353 648 aa16.56■□□□□ 0.24
COL23A1-203ENST00000484750 MASTLQ96GX5 879 aa16.56■□□□□ 0.24
COL23A1-203ENST00000484750 FMNL2Q96PY5 1086 aa16.56■□□□□ 0.24
COL23A1-203ENST00000484750 ZNF541Q9H0D2 1346 aa16.55■□□□□ 0.24
COL23A1-203ENST00000484750 PRAMEF22A3QJZ6 481 aa16.55■□□□□ 0.24
COL23A1-203ENST00000484750 KLRG2A4D1S0 409 aaPredicted RBP16.55■□□□□ 0.24
COL23A1-203ENST00000484750 ITGBL1O95965 494 aaPredicted RBP16.55■□□□□ 0.24
COL23A1-203ENST00000484750 PIP4K2AP48426 406 aaPredicted RBP16.55■□□□□ 0.24
COL23A1-203ENST00000484750 DZIP3Q86Y13 1208 aaKnown RBP16.55■□□□□ 0.24
COL23A1-203ENST00000484750 PHACTR3Q96KR7 559 aa16.55■□□□□ 0.24
COL23A1-203ENST00000484750 TAF1DQ9H5J8 278 aaPredicted RBP16.55■□□□□ 0.24
COL23A1-203ENST00000484750 USP16Q9Y5T5 823 aa16.55■□□□□ 0.24
COL23A1-203ENST00000484750 ST5P78524 1137 aa16.54■□□□□ 0.24
COL23A1-203ENST00000484750 SOGA3Q5TF21 947 aa16.54■□□□□ 0.24
COL23A1-203ENST00000484750 LDHDQ86WU2 507 aa16.54■□□□□ 0.24
COL23A1-203ENST00000484750 LAMB4A4D0S4 1761 aa16.54■□□□□ 0.24
COL23A1-203ENST00000484750 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
COL23A1-203ENST00000484750 COL4A5P29400 1685 aa16.53■□□□□ 0.24
COL23A1-203ENST00000484750 OLFM4Q6UX06 510 aa16.53■□□□□ 0.24
COL23A1-203ENST00000484750 NBPF26B4DH59 902 aa16.52■□□□□ 0.24
COL23A1-203ENST00000484750 NBPF10Q6P3W6 841 aaKnown RBP16.52■□□□□ 0.24
COL23A1-203ENST00000484750 CLEC4GQ6UXB4 293 aa16.52■□□□□ 0.24
COL23A1-203ENST00000484750 NBPF15Q8N660 670 aa16.52■□□□□ 0.24
COL23A1-203ENST00000484750 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.24
COL23A1-203ENST00000484750 THSD7BQ9C0I4 1608 aa16.52■□□□□ 0.23
COL23A1-203ENST00000484750 IQCA1LA6NCM1 817 aa16.51■□□□□ 0.23
COL23A1-203ENST00000484750 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
COL23A1-203ENST00000484750 U2AF1L5P0DN76 240 aaPredicted RBP16.51■□□□□ 0.23
COL23A1-203ENST00000484750 U2AF1Q01081 240 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL23A1-203ENST00000484750 CCDC93Q567U6 631 aa16.51■□□□□ 0.23
COL23A1-203ENST00000484750 PRDM10Q9NQV6 1147 aa16.51■□□□□ 0.23
COL23A1-203ENST00000484750 NUP98P52948 1817 aa16.51■□□□□ 0.23
COL23A1-203ENST00000484750 NPR1P16066 1061 aa16.5■□□□□ 0.23
COL23A1-203ENST00000484750 VEGFBP49765 207 aa16.5■□□□□ 0.23
COL23A1-203ENST00000484750 FKBP4Q02790 459 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL23A1-203ENST00000484750 ZNF277Q9NRM2 450 aaPredicted RBP16.5■□□□□ 0.23
COL23A1-203ENST00000484750 RGL2O15211 777 aa16.49■□□□□ 0.23
COL23A1-203ENST00000484750 PRKAR2BP31323 418 aa16.49■□□□□ 0.23
COL23A1-203ENST00000484750 NBPF5PQ86XG9 351 aaPredicted RBP16.49■□□□□ 0.23
COL23A1-203ENST00000484750 DLG5Q8TDM6 1919 aa16.49■□□□□ 0.23
COL23A1-203ENST00000484750 KDM3BQ7LBC6 1761 aa16.49■□□□□ 0.23
COL23A1-203ENST00000484750 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
COL23A1-203ENST00000484750 TMEM88BA6NKF7 163 aa16.48■□□□□ 0.23
COL23A1-203ENST00000484750 FZD9O00144 591 aa16.48■□□□□ 0.23
COL23A1-203ENST00000484750 WBP1LQ9NX94 342 aa16.48■□□□□ 0.23
COL23A1-203ENST00000484750 ABCC12Q96J65 1359 aa16.48■□□□□ 0.23
COL23A1-203ENST00000484750 MYBBP1AQ9BQG0 1328 aaKnown RBP16.47■□□□□ 0.23
COL23A1-203ENST00000484750 HACL1Q9UJ83 578 aa16.47■□□□□ 0.23
COL23A1-203ENST00000484750 RNF123Q5XPI4 1314 aa16.46■□□□□ 0.23
COL23A1-203ENST00000484750 TRPM7Q96QT4 1865 aa16.46■□□□□ 0.23
COL23A1-203ENST00000484750 RASSF10A6NK89 507 aa16.46■□□□□ 0.23
COL23A1-203ENST00000484750 NPHP1O15259 732 aa16.46■□□□□ 0.23
COL23A1-203ENST00000484750 SNRPA1P09661 255 aaKnown RBP16.46■□□□□ 0.23
COL23A1-203ENST00000484750 EPHX2P34913 555 aa16.46■□□□□ 0.23
COL23A1-203ENST00000484750 HLFQ16534 295 aa16.46■□□□□ 0.23
COL23A1-203ENST00000484750 CRY2Q49AN0 593 aa16.46■□□□□ 0.23
COL23A1-203ENST00000484750 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
COL23A1-203ENST00000484750 NEFMP07197 916 aa16.45■□□□□ 0.22
COL23A1-203ENST00000484750 IARSP41252 1262 aaKnown RBP16.45■□□□□ 0.22
COL23A1-203ENST00000484750 CTCFP49711 727 aaPredicted RBP16.45■□□□□ 0.22
COL23A1-203ENST00000484750 EAPPQ56P03 285 aaPredicted RBP16.45■□□□□ 0.22
COL23A1-203ENST00000484750 MCM10Q7L590 875 aa16.45■□□□□ 0.22
COL23A1-203ENST00000484750 SLC51AQ86UW1 340 aa16.45■□□□□ 0.22
COL23A1-203ENST00000484750 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
COL23A1-203ENST00000484750 TPTE2Q6XPS3 522 aa16.44■□□□□ 0.22
COL23A1-203ENST00000484750 NPM2Q86SE8 214 aaKnown RBP16.44■□□□□ 0.22
COL23A1-203ENST00000484750 RTKN2Q8IZC4 609 aa16.44■□□□□ 0.22
COL23A1-203ENST00000484750 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
COL23A1-203ENST00000484750 RIC1Q4ADV7 1423 aa16.44■□□□□ 0.22
COL23A1-203ENST00000484750 HSPA8P11142 646 aaKnown RBP16.43■□□□□ 0.22
COL23A1-203ENST00000484750 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
COL23A1-203ENST00000484750 MAP1SQ66K74 1059 aaPredicted RBP16.43■□□□□ 0.22
COL23A1-203ENST00000484750 CNTROBQ8N137 903 aa16.43■□□□□ 0.22
COL23A1-203ENST00000484750 SYNE4Q8N205 404 aa16.43■□□□□ 0.22
COL23A1-203ENST00000484750 PSMD1Q99460 953 aa16.43■□□□□ 0.22
COL23A1-203ENST00000484750 PRKRIP1Q9H875 184 aaPredicted RBP16.43■□□□□ 0.22
COL23A1-203ENST00000484750 LBX1P52954 281 aa16.42■□□□□ 0.22
COL23A1-203ENST00000484750 GPC2Q8N158 579 aa16.42■□□□□ 0.22
COL23A1-203ENST00000484750 FAM177BA6PVY3 158 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms