RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PDIA6Q15084 440 aa16.86■□□□□ 0.29
HDAC1-209ENST00000484305 DALRD3Q5D0E6 543 aaKnown RBP16.86■□□□□ 0.29
HDAC1-209ENST00000484305 TTLL7Q6ZT98 887 aa16.86■□□□□ 0.29
HDAC1-209ENST00000484305 RGL2O15211 777 aa16.85■□□□□ 0.29
HDAC1-209ENST00000484305 ARHGAP27Q6ZUM4 889 aa16.85■□□□□ 0.29
HDAC1-209ENST00000484305 C2CD5Q86YS7 1000 aa16.85■□□□□ 0.29
HDAC1-209ENST00000484305 CNBD1Q8NA66 436 aa16.85■□□□□ 0.29
HDAC1-209ENST00000484305 CFAP44Q96MT7 982 aa16.85■□□□□ 0.29
HDAC1-209ENST00000484305 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
HDAC1-209ENST00000484305 NIP7Q9Y221 180 aaKnown RBP eCLIP16.85■□□□□ 0.29
HDAC1-209ENST00000484305 ERBB4Q15303 1308 aa16.85■□□□□ 0.29
HDAC1-209ENST00000484305 PROSER3Q2NL68 480 aa16.84■□□□□ 0.29
HDAC1-209ENST00000484305 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
HDAC1-209ENST00000484305 NECTIN2Q92692 538 aa16.84■□□□□ 0.29
HDAC1-209ENST00000484305 BRIP1Q9BX63 1249 aa16.84■□□□□ 0.29
HDAC1-209ENST00000484305 COL11A2P13942 1736 aaPredicted RBP16.84■□□□□ 0.29
HDAC1-209ENST00000484305 SENP3-EIF4A1A0A087X0R7 540 aa16.83■□□□□ 0.28
HDAC1-209ENST00000484305 ERVV-1B6SEH8 477 aa16.83■□□□□ 0.28
HDAC1-209ENST00000484305 H0YIN7 160 aa16.83■□□□□ 0.28
HDAC1-209ENST00000484305 NPHP1O15259 732 aa16.83■□□□□ 0.28
HDAC1-209ENST00000484305 ANXA1P04083 346 aa16.83■□□□□ 0.28
HDAC1-209ENST00000484305 MAP3K15Q6ZN16 1313 aa16.83■□□□□ 0.28
HDAC1-209ENST00000484305 NBPF5PQ86XG9 351 aaPredicted RBP16.83■□□□□ 0.28
HDAC1-209ENST00000484305 MBIPQ9NS73 344 aa16.83■□□□□ 0.28
HDAC1-209ENST00000484305 ADCY9O60503 1353 aa16.82■□□□□ 0.28
HDAC1-209ENST00000484305 ZNF853P0CG23 659 aa16.82■□□□□ 0.28
HDAC1-209ENST00000484305 PDE6BP35913 854 aa16.82■□□□□ 0.28
HDAC1-209ENST00000484305 ST5P78524 1137 aa16.82■□□□□ 0.28
HDAC1-209ENST00000484305 KIF6Q6ZMV9 814 aa16.82■□□□□ 0.28
HDAC1-209ENST00000484305 ZBTB3Q9H5J0 574 aa16.82■□□□□ 0.28
HDAC1-209ENST00000484305 ATP10DQ9P241 1426 aa16.81■□□□□ 0.28
HDAC1-209ENST00000484305 FAM177BA6PVY3 158 aa16.81■□□□□ 0.28
HDAC1-209ENST00000484305 TTLL6Q8N841 843 aa16.81■□□□□ 0.28
HDAC1-209ENST00000484305 SBF1O95248 1867 aa16.8■□□□□ 0.28
HDAC1-209ENST00000484305 TPTE2Q6XPS3 522 aa16.8■□□□□ 0.28
HDAC1-209ENST00000484305 IFT57Q9NWB7 429 aa16.8■□□□□ 0.28
HDAC1-209ENST00000484305 CACNA1SQ13698 1873 aa16.8■□□□□ 0.28
HDAC1-209ENST00000484305 GNAI1P63096 354 aa16.79■□□□□ 0.28
HDAC1-209ENST00000484305 CALD1Q05682 793 aaKnown RBP16.79■□□□□ 0.28
HDAC1-209ENST00000484305 DUSP27Q5VZP5 1158 aa16.79■□□□□ 0.28
HDAC1-209ENST00000484305 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.284e-7■□□□□ 9.1
HDAC1-209ENST00000484305 PDZRN3Q9UPQ7 1066 aa16.79■□□□□ 0.28
HDAC1-209ENST00000484305 HOXB7P09629 217 aa16.78■□□□□ 0.28
HDAC1-209ENST00000484305 GPTP24298 496 aa16.78■□□□□ 0.28
HDAC1-209ENST00000484305 GIGYF2Q6Y7W6 1299 aaKnown RBP16.78■□□□□ 0.28
HDAC1-209ENST00000484305 DDX21Q9NR30 783 aaKnown RBP eCLIP16.78■□□□□ 0.28
HDAC1-209ENST00000484305 CHPF2Q9P2E5 772 aa16.78■□□□□ 0.28
HDAC1-209ENST00000484305 SLX4Q8IY92 1834 aa16.77■□□□□ 0.28
HDAC1-209ENST00000484305 UBN2Q6ZU65 1347 aa16.77■□□□□ 0.28
HDAC1-209ENST00000484305 SRGNP10124 158 aa16.77■□□□□ 0.28
HDAC1-209ENST00000484305 AIMP1Q12904 312 aaKnown RBP16.77■□□□□ 0.28
HDAC1-209ENST00000484305 HDGFL1Q5TGJ6 251 aa16.77■□□□□ 0.28
HDAC1-209ENST00000484305 COPS6Q7L5N1 327 aa16.77■□□□□ 0.28
HDAC1-209ENST00000484305 ZNF34Q8IZ26 560 aa16.77■□□□□ 0.28
HDAC1-209ENST00000484305 XAGE3Q8WTP9 111 aa16.77■□□□□ 0.28
HDAC1-209ENST00000484305 CCDC88AQ3V6T2 1871 aa16.76■□□□□ 0.27
HDAC1-209ENST00000484305 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
HDAC1-209ENST00000484305 NUTM1Q86Y26 1132 aa16.76■□□□□ 0.27
HDAC1-209ENST00000484305 WWC1Q8IX03 1113 aa16.76■□□□□ 0.27
HDAC1-209ENST00000484305 ZNF526Q8TF50 670 aaPredicted RBP16.76■□□□□ 0.27
HDAC1-209ENST00000484305 ANKRD36CQ5JPF3 1778 aa16.75■□□□□ 0.27
HDAC1-209ENST00000484305 ARFGEF2Q9Y6D5 1785 aa16.75■□□□□ 0.27
HDAC1-209ENST00000484305 KLRG2A4D1S0 409 aaPredicted RBP16.75■□□□□ 0.27
HDAC1-209ENST00000484305 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
HDAC1-209ENST00000484305 GTF2E1P29083 439 aaPredicted RBP16.75■□□□□ 0.27
HDAC1-209ENST00000484305 RASSF7Q02833 373 aa16.75■□□□□ 0.27
HDAC1-209ENST00000484305 SUSD4Q5VX71 490 aa16.75■□□□□ 0.27
HDAC1-209ENST00000484305 C9orf131Q5VYM1 1079 aa16.75■□□□□ 0.27
HDAC1-209ENST00000484305 STYK1Q6J9G0 422 aa16.75■□□□□ 0.27
HDAC1-209ENST00000484305 MASTLQ96GX5 879 aa16.75■□□□□ 0.27
HDAC1-209ENST00000484305 NYXQ9GZU5 481 aa16.75■□□□□ 0.27
HDAC1-209ENST00000484305 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
HDAC1-209ENST00000484305 TNRC6CQ9HCJ0 1690 aaKnown RBP16.75■□□□□ 0.27
HDAC1-209ENST00000484305 C21orf2O43822 256 aa16.74■□□□□ 0.27
HDAC1-209ENST00000484305 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
HDAC1-209ENST00000484305 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
HDAC1-209ENST00000484305 C8orf58Q8NAV2 365 aa16.74■□□□□ 0.27
HDAC1-209ENST00000484305 GPBP1L1Q9HC44 474 aaPredicted RBP16.74■□□□□ 0.27
HDAC1-209ENST00000484305 DBF4Q9UBU7 674 aaPredicted RBP16.74■□□□□ 0.27
HDAC1-209ENST00000484305 ABCC12Q96J65 1359 aa16.74■□□□□ 0.27
HDAC1-209ENST00000484305 FER1L6Q2WGJ9 1857 aa16.73■□□□□ 0.27
HDAC1-209ENST00000484305 NPR1P16066 1061 aa16.73■□□□□ 0.27
HDAC1-209ENST00000484305 PRPF40BQ6NWY9 871 aaKnown RBP16.73■□□□□ 0.27
HDAC1-209ENST00000484305 TSR2Q969E8 191 aaKnown RBP16.73■□□□□ 0.27
HDAC1-209ENST00000484305 CNKSR1Q969H4 720 aa16.73■□□□□ 0.27
HDAC1-209ENST00000484305 RNF181Q9P0P0 153 aa16.73■□□□□ 0.27
HDAC1-209ENST00000484305 NTSR2O95665 410 aa16.72■□□□□ 0.27
HDAC1-209ENST00000484305 PRELPP51888 382 aa16.72■□□□□ 0.27
HDAC1-209ENST00000484305 SALL2Q9Y467 1007 aaPredicted RBP16.72■□□□□ 0.27
HDAC1-209ENST00000484305 IBTKQ9P2D0 1353 aaPredicted RBP16.72■□□□□ 0.27
HDAC1-209ENST00000484305 NFKBIEO00221 500 aa16.71■□□□□ 0.27
HDAC1-209ENST00000484305 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
HDAC1-209ENST00000484305 PARP10Q53GL7 1025 aa16.71■□□□□ 0.27
HDAC1-209ENST00000484305 PPP1R42Q7Z4L9 355 aa16.71■□□□□ 0.27
HDAC1-209ENST00000484305 TSPYL6Q8N831 410 aa16.71■□□□□ 0.27
HDAC1-209ENST00000484305 HYPKQ9NX55 129 aa16.71■□□□□ 0.27
HDAC1-209ENST00000484305 TCIRG1Q13488 830 aa16.7■□□□□ 0.26
HDAC1-209ENST00000484305 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
HDAC1-209ENST00000484305 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
HDAC1-209ENST00000484305 LMNB1P20700 586 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms