RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 DDX21Q9NR30 783 aaKnown RBP eCLIP34.5■■■■□ 3.11
SMDT1-203ENST00000484235 ERVV-1B6SEH8 477 aa34.49■■■■□ 3.11
SMDT1-203ENST00000484235 ELL2O00472 640 aaPredicted RBP34.49■■■■□ 3.11
SMDT1-203ENST00000484235 PROSER3Q2NL68 480 aa34.49■■■■□ 3.11
SMDT1-203ENST00000484235 KIF6Q6ZMV9 814 aa34.49■■■■□ 3.11
SMDT1-203ENST00000484235 CHMP4AQ9BY43 222 aa34.49■■■■□ 3.11
SMDT1-203ENST00000484235 TTLL7Q6ZT98 887 aa34.48■■■■□ 3.11
SMDT1-203ENST00000484235 SETDB2Q96T68 719 aa34.48■■■■□ 3.11
SMDT1-203ENST00000484235 SERPINB2P05120 415 aa34.47■■■■□ 3.11
SMDT1-203ENST00000484235 DBF4Q9UBU7 674 aaPredicted RBP34.47■■■■□ 3.11
SMDT1-203ENST00000484235 ANXA1P04083 346 aa34.46■■■■□ 3.11
SMDT1-203ENST00000484235 CHPF2Q9P2E5 772 aa34.46■■■■□ 3.11
SMDT1-203ENST00000484235 MAP3K15Q6ZN16 1313 aa34.46■■■■□ 3.11
SMDT1-203ENST00000484235 SCN7AQ01118 1682 aa34.45■■■■□ 3.11
SMDT1-203ENST00000484235 ZNF521Q96K83 1311 aa34.45■■■■□ 3.11
SMDT1-203ENST00000484235 TGFB2P61812 414 aa34.44■■■■□ 3.1
SMDT1-203ENST00000484235 HLFQ16534 295 aa34.44■■■■□ 3.1
SMDT1-203ENST00000484235 FANCIQ9NVI1 1328 aa34.44■■■■□ 3.1
SMDT1-203ENST00000484235 C10orf71Q711Q0 1435 aa34.44■■■■□ 3.1
SMDT1-203ENST00000484235 GOLGA2Q08379 1002 aa34.43■■■■□ 3.1
SMDT1-203ENST00000484235 TSPYL6Q8N831 410 aa34.43■■■■□ 3.1
SMDT1-203ENST00000484235 MYH16Q9H6N6 1097 aa34.43■■■■□ 3.1
SMDT1-203ENST00000484235 CARMIL3Q8ND23 1372 aa34.42■■■■□ 3.1
SMDT1-203ENST00000484235 COPS6Q7L5N1 327 aa34.42■■■■□ 3.1
SMDT1-203ENST00000484235 SPINK5Q9NQ38 1064 aaPredicted RBP34.42■■■■□ 3.1
SMDT1-203ENST00000484235 HYPKQ9NX55 129 aa34.42■■■■□ 3.1
SMDT1-203ENST00000484235 ZBTB3Q9H5J0 574 aa34.41■■■■□ 3.1
SMDT1-203ENST00000484235 CCDC30Q5VVM6 783 aa34.4■■■■□ 3.1
SMDT1-203ENST00000484235 XAGE3Q8WTP9 111 aa34.4■■■■□ 3.1
SMDT1-203ENST00000484235 ATP10DQ9P241 1426 aa34.39■■■■□ 3.1
SMDT1-203ENST00000484235 AIMP1Q12904 312 aaKnown RBP34.39■■■■□ 3.1
SMDT1-203ENST00000484235 TWISTNBQ3B726 338 aaPredicted RBP34.39■■■■□ 3.1
SMDT1-203ENST00000484235 NIP7Q9Y221 180 aaKnown RBP eCLIP34.39■■■■□ 3.1
SMDT1-203ENST00000484235 BCORQ6W2J9 1755 aa34.39■■■■□ 3.1
SMDT1-203ENST00000484235 ADCY9O60503 1353 aa34.37■■■■□ 3.09
SMDT1-203ENST00000484235 GIGYF2Q6Y7W6 1299 aaKnown RBP34.37■■■■□ 3.09
SMDT1-203ENST00000484235 A0A0G2JLW4 131 aa34.34■■■■□ 3.09
SMDT1-203ENST00000484235 EXOSC9Q06265 439 aaKnown RBP34.34■■■■□ 3.09
SMDT1-203ENST00000484235 NBPF5PQ86XG9 351 aaPredicted RBP34.34■■■■□ 3.09
SMDT1-203ENST00000484235 KIF13BQ9NQT8 1826 aa34.33■■■■□ 3.09
SMDT1-203ENST00000484235 PRR5LQ6MZQ0 368 aa34.33■■■■□ 3.09
SMDT1-203ENST00000484235 CNBD1Q8NA66 436 aa34.33■■■■□ 3.09
SMDT1-203ENST00000484235 DPEP1P16444 411 aa34.32■■■■□ 3.08
SMDT1-203ENST00000484235 TPTE2Q6XPS3 522 aa34.32■■■■□ 3.08
SMDT1-203ENST00000484235 NRXN2Q9P2S2 1712 aa34.32■■■■□ 3.08
SMDT1-203ENST00000484235 PXDNLA1KZ92 1463 aa34.32■■■■□ 3.08
SMDT1-203ENST00000484235 NPHP1O15259 732 aa34.31■■■■□ 3.08
SMDT1-203ENST00000484235 ANKRD13DQ6ZTN6 518 aa34.31■■■■□ 3.08
SMDT1-203ENST00000484235 ZNF34Q8IZ26 560 aa34.31■■■■□ 3.08
SMDT1-203ENST00000484235 WWC3Q9ULE0 1092 aa34.31■■■■□ 3.08
SMDT1-203ENST00000484235 E9PSI1 815 aa34.3■■■■□ 3.08
SMDT1-203ENST00000484235 VAMP4O75379 141 aa34.3■■■■□ 3.08
SMDT1-203ENST00000484235 PLBD2Q8NHP8 589 aa34.3■■■■□ 3.08
SMDT1-203ENST00000484235 BRIP1Q9BX63 1249 aa34.3■■■■□ 3.08
SMDT1-203ENST00000484235 STK31Q9BXU1 1019 aa34.3■■■■□ 3.08
SMDT1-203ENST00000484235 HSP90AB3PQ58FF7 597 aa34.29■■■■□ 3.08
SMDT1-203ENST00000484235 AFDNP55196 1824 aaKnown RBP34.29■■■■□ 3.08
SMDT1-203ENST00000484235 KCNA3P22001 575 aa34.28■■■■□ 3.08
SMDT1-203ENST00000484235 GPTP24298 496 aa34.28■■■■□ 3.08
SMDT1-203ENST00000484235 ST5P78524 1137 aa34.28■■■■□ 3.08
SMDT1-203ENST00000484235 CEP350Q5VT06 3117 aa34.27■■■■□ 3.08
SMDT1-203ENST00000484235 PHAXQ9H814 394 aaKnown RBP34.27■■■■□ 3.08
SMDT1-203ENST00000484235 PDE6BP35913 854 aa34.26■■■■□ 3.08
SMDT1-203ENST00000484235 SLFN5Q08AF3 891 aa34.26■■■■□ 3.08
SMDT1-203ENST00000484235 CCDC24Q8N4L8 307 aa34.26■■■■□ 3.08
SMDT1-203ENST00000484235 NYXQ9GZU5 481 aa34.26■■■■□ 3.08
SMDT1-203ENST00000484235 GPBP1L1Q9HC44 474 aaPredicted RBP34.26■■■■□ 3.08
SMDT1-203ENST00000484235 FAM177BA6PVY3 158 aa34.25■■■■□ 3.07
SMDT1-203ENST00000484235 CHRNA5P30532 468 aa34.25■■■■□ 3.07
SMDT1-203ENST00000484235 TCIRG1Q13488 830 aa34.25■■■■□ 3.07
SMDT1-203ENST00000484235 PARP10Q53GL7 1025 aa34.25■■■■□ 3.07
SMDT1-203ENST00000484235 PIM2Q9P1W9 311 aa34.25■■■■□ 3.07
SMDT1-203ENST00000484235 PDZRN3Q9UPQ7 1066 aa34.25■■■■□ 3.07
SMDT1-203ENST00000484235 NUP98P52948 1817 aa34.24■■■■□ 3.07
SMDT1-203ENST00000484235 UBN2Q6ZU65 1347 aa34.24■■■■□ 3.07
SMDT1-203ENST00000484235 H0YIN7 160 aa34.23■■■■□ 3.07
SMDT1-203ENST00000484235 TCERG1O14776 1098 aaKnown RBP34.23■■■■□ 3.07
SMDT1-203ENST00000484235 SLC4A2P04920 1241 aa34.23■■■■□ 3.07
SMDT1-203ENST00000484235 GTF2E1P29083 439 aaPredicted RBP34.23■■■■□ 3.07
SMDT1-203ENST00000484235 SUSD4Q5VX71 490 aa34.22■■■■□ 3.07
SMDT1-203ENST00000484235 PPP1R42Q7Z4L9 355 aa34.22■■■■□ 3.07
SMDT1-203ENST00000484235 C2CD5Q86YS7 1000 aa34.22■■■■□ 3.07
SMDT1-203ENST00000484235 DDX58O95786 925 aaKnown RBP34.21■■■■□ 3.07
SMDT1-203ENST00000484235 RIC3Q7Z5B4 369 aa34.21■■■■□ 3.07
SMDT1-203ENST00000484235 CDCA7LQ96GN5 454 aa34.21■■■■□ 3.07
SMDT1-203ENST00000484235 KIAA1551Q9HCM1 1747 aa34.21■■■■□ 3.07
SMDT1-203ENST00000484235 IBTKQ9P2D0 1353 aaPredicted RBP34.2■■■■□ 3.07
SMDT1-203ENST00000484235 N4BP2Q86UW6 1770 aaPredicted RBP34.19■■■■□ 3.06
SMDT1-203ENST00000484235 TRMT2AQ8IZ69 625 aaKnown RBP34.19■■■■□ 3.06
SMDT1-203ENST00000484235 BCS1LQ9Y276 419 aa34.19■■■■□ 3.06
SMDT1-203ENST00000484235 DALRD3Q5D0E6 543 aaKnown RBP34.18■■■■□ 3.06
SMDT1-203ENST00000484235 NLRP10Q86W26 655 aa34.18■■■■□ 3.06
SMDT1-203ENST00000484235 ZNF526Q8TF50 670 aaPredicted RBP34.18■■■■□ 3.06
SMDT1-203ENST00000484235 UTP14AQ9BVJ6 771 aaKnown RBP34.17■■■■□ 3.06
SMDT1-203ENST00000484235 NTSR2O95665 410 aa34.16■■■■□ 3.06
SMDT1-203ENST00000484235 ERFEQ4G0M1 354 aa34.16■■■■□ 3.06
SMDT1-203ENST00000484235 NUTM1Q86Y26 1132 aa34.16■■■■□ 3.06
SMDT1-203ENST00000484235 ISCA1Q9BUE6 129 aa34.16■■■■□ 3.06
SMDT1-203ENST00000484235 KLRG2A4D1S0 409 aaPredicted RBP34.15■■■■□ 3.06
SMDT1-203ENST00000484235 HNRNPUQ00839 825 aaKnown RBP eCLIP34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms