RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
NUP50-215ENST00000484186 PRELPP51888 382 aa12.42□□□□□ -0.42
NUP50-215ENST00000484186 HLFQ16534 295 aa12.42□□□□□ -0.42
NUP50-215ENST00000484186 STYK1Q6J9G0 422 aa12.42□□□□□ -0.42
NUP50-215ENST00000484186 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
NUP50-215ENST00000484186 NGEFQ8N5V2 710 aa12.42□□□□□ -0.42
NUP50-215ENST00000484186 CNKSR1Q969H4 720 aa12.42□□□□□ -0.42
NUP50-215ENST00000484186 NIP7Q9Y221 180 aaKnown RBP eCLIP12.42□□□□□ -0.42
NUP50-215ENST00000484186 ANKRD31Q8N7Z5 1873 aa12.42□□□□□ -0.42
NUP50-215ENST00000484186 ZC3H4Q9UPT8 1303 aaKnown RBP12.41□□□□□ -0.42
NUP50-215ENST00000484186 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
NUP50-215ENST00000484186 ERVV-1B6SEH8 477 aa12.41□□□□□ -0.42
NUP50-215ENST00000484186 NFKBIEO00221 500 aa12.41□□□□□ -0.42
NUP50-215ENST00000484186 C21orf2O43822 256 aa12.41□□□□□ -0.42
NUP50-215ENST00000484186 SBF1O95248 1867 aa12.41□□□□□ -0.42
NUP50-215ENST00000484186 MASTLQ96GX5 879 aa12.41□□□□□ -0.42
NUP50-215ENST00000484186 RRAGCQ9HB90 399 aa12.41□□□□□ -0.42
NUP50-215ENST00000484186 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
NUP50-215ENST00000484186 TSPYL4Q9UJ04 414 aa12.41□□□□□ -0.42
NUP50-215ENST00000484186 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
NUP50-215ENST00000484186 KLRG2A4D1S0 409 aaPredicted RBP12.4□□□□□ -0.42
NUP50-215ENST00000484186 MYL6BP14649 208 aa12.4□□□□□ -0.42
NUP50-215ENST00000484186 LMOD3Q0VAK6 560 aa12.4□□□□□ -0.42
NUP50-215ENST00000484186 C16orf71Q8IYS4 520 aaPredicted RBP12.4□□□□□ -0.42
NUP50-215ENST00000484186 BABAM1Q9NWV8 329 aa12.4□□□□□ -0.42
NUP50-215ENST00000484186 KDM3BQ7LBC6 1761 aa12.4□□□□□ -0.42
NUP50-215ENST00000484186 GLTPD2A6NH11 291 aa12.39□□□□□ -0.43
NUP50-215ENST00000484186 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
NUP50-215ENST00000484186 NPR1P16066 1061 aa12.39□□□□□ -0.43
NUP50-215ENST00000484186 PRPF40BQ6NWY9 871 aaKnown RBP12.39□□□□□ -0.43
NUP50-215ENST00000484186 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
NUP50-215ENST00000484186 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
NUP50-215ENST00000484186 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
NUP50-215ENST00000484186 MAP3K15Q6ZN16 1313 aa12.38□□□□□ -0.43
NUP50-215ENST00000484186 GTF2E1P29083 439 aaPredicted RBP12.38□□□□□ -0.43
NUP50-215ENST00000484186 WDR43Q15061 677 aaKnown RBP eCLIP12.38□□□□□ -0.43
NUP50-215ENST00000484186 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
NUP50-215ENST00000484186 SOGA3Q5TF21 947 aa12.38□□□□□ -0.43
NUP50-215ENST00000484186 KIF6Q6ZMV9 814 aa12.38□□□□□ -0.43
NUP50-215ENST00000484186 CCDC146Q8IYE0 955 aa12.38□□□□□ -0.43
NUP50-215ENST00000484186 RUNDC1Q96C34 613 aa12.38□□□□□ -0.43
NUP50-215ENST00000484186 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
NUP50-215ENST00000484186 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
NUP50-215ENST00000484186 COL11A2P13942 1736 aaPredicted RBP12.37□□□□□ -0.43
NUP50-215ENST00000484186 EIF2S2P20042 333 aaKnown RBP12.37□□□□□ -0.43
NUP50-215ENST00000484186 APLP1P51693 650 aa12.37□□□□□ -0.43
NUP50-215ENST00000484186 DPY19L2Q6NUT2 758 aa12.37□□□□□ -0.43
NUP50-215ENST00000484186 NYXQ9GZU5 481 aa12.37□□□□□ -0.43
NUP50-215ENST00000484186 PRKRIP1Q9H875 184 aaPredicted RBP12.37□□□□□ -0.43
NUP50-215ENST00000484186 ADAMTS8Q9UP79 889 aa12.37□□□□□ -0.43
NUP50-215ENST00000484186 VEGFAP15692 232 aaPredicted RBP12.36□□□□□ -0.43
NUP50-215ENST00000484186 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
NUP50-215ENST00000484186 FSTL1Q12841 308 aa12.36□□□□□ -0.43
NUP50-215ENST00000484186 PDIA6Q15084 440 aa12.36□□□□□ -0.43
NUP50-215ENST00000484186 ERFEQ4G0M1 354 aa12.36□□□□□ -0.43
NUP50-215ENST00000484186 C7orf43Q8WVR3 580 aa12.36□□□□□ -0.43
NUP50-215ENST00000484186 TAOK3Q9H2K8 898 aa12.36□□□□□ -0.43
NUP50-215ENST00000484186 ZBTB3Q9H5J0 574 aa12.36□□□□□ -0.43
NUP50-215ENST00000484186 SLX4Q8IY92 1834 aa12.35□□□□□ -0.43
NUP50-215ENST00000484186 CHL1O00533 1208 aa12.35□□□□□ -0.43
NUP50-215ENST00000484186 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
NUP50-215ENST00000484186 ZNF34Q8IZ26 560 aa12.35□□□□□ -0.43
NUP50-215ENST00000484186 TRIM35Q9UPQ4 493 aa12.35□□□□□ -0.43
NUP50-215ENST00000484186 FER1L6Q2WGJ9 1857 aa12.34□□□□□ -0.43
NUP50-215ENST00000484186 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
NUP50-215ENST00000484186 GPTP24298 496 aa12.34□□□□□ -0.43
NUP50-215ENST00000484186 CCDC93Q567U6 631 aa12.34□□□□□ -0.43
NUP50-215ENST00000484186 SUSD4Q5VX71 490 aa12.34□□□□□ -0.43
NUP50-215ENST00000484186 LRP10Q7Z4F1 713 aa12.34□□□□□ -0.43
NUP50-215ENST00000484186 NUTM1Q86Y26 1132 aa12.34□□□□□ -0.43
NUP50-215ENST00000484186 LAS1LQ9Y4W2 734 aaKnown RBP12.34□□□□□ -0.43
NUP50-215ENST00000484186 UBN2Q6ZU65 1347 aa12.34□□□□□ -0.43
NUP50-215ENST00000484186 NUP98P52948 1817 aa12.33□□□□□ -0.44
NUP50-215ENST00000484186 POTECB2RU33 542 aa12.33□□□□□ -0.44
NUP50-215ENST00000484186 CRY2Q49AN0 593 aa12.33□□□□□ -0.44
NUP50-215ENST00000484186 PPP1R42Q7Z4L9 355 aa12.33□□□□□ -0.44
NUP50-215ENST00000484186 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
NUP50-215ENST00000484186 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
NUP50-215ENST00000484186 IBTKQ9P2D0 1353 aaPredicted RBP12.32□□□□□ -0.44
NUP50-215ENST00000484186 ANXA1P04083 346 aa12.32□□□□□ -0.44
NUP50-215ENST00000484186 FKBP4Q02790 459 aaKnown RBP eCLIP12.32□□□□□ -0.44
NUP50-215ENST00000484186 PROSER3Q2NL68 480 aa12.32□□□□□ -0.44
NUP50-215ENST00000484186 PARP10Q53GL7 1025 aa12.32□□□□□ -0.44
NUP50-215ENST00000484186 COPS6Q7L5N1 327 aa12.32□□□□□ -0.44
NUP50-215ENST00000484186 RTKN2Q8IZC4 609 aa12.32□□□□□ -0.44
NUP50-215ENST00000484186 DNAJC5GQ8N7S2 189 aa12.32□□□□□ -0.44
NUP50-215ENST00000484186 NECTIN2Q92692 538 aa12.32□□□□□ -0.44
NUP50-215ENST00000484186 ABCC12Q96J65 1359 aa12.31□□□□□ -0.44
NUP50-215ENST00000484186 ARFGEF2Q9Y6D5 1785 aa12.31□□□□□ -0.44
NUP50-215ENST00000484186 NTSR2O95665 410 aa12.31□□□□□ -0.44
NUP50-215ENST00000484186 AIMP1Q12904 312 aaKnown RBP12.31□□□□□ -0.44
NUP50-215ENST00000484186 KRT24Q2M2I5 525 aa12.31□□□□□ -0.44
NUP50-215ENST00000484186 OLFM4Q6UX06 510 aa12.31□□□□□ -0.44
NUP50-215ENST00000484186 DDX21Q9NR30 783 aaKnown RBP eCLIP12.31□□□□□ -0.44
NUP50-215ENST00000484186 CACNA1SQ13698 1873 aa12.31□□□□□ -0.44
NUP50-215ENST00000484186 TIAM2Q8IVF5 1701 aa12.31□□□□□ -0.44
NUP50-215ENST00000484186 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
NUP50-215ENST00000484186 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
NUP50-215ENST00000484186 HSP90AB3PQ58FF7 597 aa12.3□□□□□ -0.44
NUP50-215ENST00000484186 XAGE3Q8WTP9 111 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms