RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 CWF19L2Q2TBE0 894 aaKnown RBP12.7□□□□□ -0.38
HDAC6-226ENST00000483656 CEP85Q6P2H3 762 aa12.7□□□□□ -0.38
HDAC6-226ENST00000483656 KRT27Q7Z3Y8 459 aa12.7□□□□□ -0.38
HDAC6-226ENST00000483656 ANKRD44Q8N8A2 993 aa12.7□□□□□ -0.38
HDAC6-226ENST00000483656 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
HDAC6-226ENST00000483656 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-226ENST00000483656 GNAI2P04899 355 aa12.69□□□□□ -0.38
HDAC6-226ENST00000483656 RPAP2Q8IXW5 612 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-226ENST00000483656 SMC5Q8IY18 1101 aa12.69□□□□□ -0.38
HDAC6-226ENST00000483656 MYD88Q99836 296 aa12.69□□□□□ -0.38
HDAC6-226ENST00000483656 ZNF831Q5JPB2 1677 aa12.69□□□□□ -0.38
HDAC6-226ENST00000483656 RREB1Q92766 1687 aa12.69□□□□□ -0.38
HDAC6-226ENST00000483656 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
HDAC6-226ENST00000483656 NUP188Q5SRE5 1749 aa12.68□□□□□ -0.38
HDAC6-226ENST00000483656 UTYO14607 1347 aa12.68□□□□□ -0.38
HDAC6-226ENST00000483656 NEURL1BA8MQ27 555 aa12.68□□□□□ -0.38
HDAC6-226ENST00000483656 NBPF7P0C2Y1 421 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-226ENST00000483656 BCL11BQ9C0K0 894 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-226ENST00000483656 CCDC87Q9NVE4 849 aa12.68□□□□□ -0.38
HDAC6-226ENST00000483656 LRRFIP2Q9Y608 721 aaKnown RBP12.68□□□□□ -0.38
HDAC6-226ENST00000483656 UBTFL1P0CB47 393 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-226ENST00000483656 RXRBP28702 533 aa12.67□□□□□ -0.38
HDAC6-226ENST00000483656 IL6STP40189 918 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-226ENST00000483656 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
HDAC6-226ENST00000483656 EIF5P55010 431 aaKnown RBP12.67□□□□□ -0.38
HDAC6-226ENST00000483656 KCNQ4P56696 695 aa12.67□□□□□ -0.38
HDAC6-226ENST00000483656 FAM196AQ6ZSG2 479 aa12.67□□□□□ -0.38
HDAC6-226ENST00000483656 LINC00116Q8NCU8 138 aa12.67□□□□□ -0.38
HDAC6-226ENST00000483656 ZBTB3Q9H5J0 574 aa12.67□□□□□ -0.38
HDAC6-226ENST00000483656 PDZRN3Q9UPQ7 1066 aa12.67□□□□□ -0.38
HDAC6-226ENST00000483656 COL5A3P25940 1745 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-226ENST00000483656 ATP5J2-PTCD1G3V325 749 aa12.66□□□□□ -0.38
HDAC6-226ENST00000483656 ATP8B2P98198 1209 aa12.66□□□□□ -0.38
HDAC6-226ENST00000483656 NEXNQ0ZGT2 675 aa12.66□□□□□ -0.38
HDAC6-226ENST00000483656 GCKRQ14397 625 aa12.66□□□□□ -0.38
HDAC6-226ENST00000483656 MYH14Q7Z406 1995 aaKnown RBP12.66□□□□□ -0.38
HDAC6-226ENST00000483656 MAP3K15Q6ZN16 1313 aa12.65□□□□□ -0.38
HDAC6-226ENST00000483656 GRM8O00222 908 aa12.65□□□□□ -0.38
HDAC6-226ENST00000483656 KAZALD1Q96I82 304 aa12.65□□□□□ -0.38
HDAC6-226ENST00000483656 ISCA1Q9BUE6 129 aa12.65□□□□□ -0.38
HDAC6-226ENST00000483656 DCTPP1Q9H773 170 aa12.65□□□□□ -0.38
HDAC6-226ENST00000483656 ZNF330Q9Y3S2 320 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-226ENST00000483656 LY75O60449 1722 aa12.65□□□□□ -0.38
HDAC6-226ENST00000483656 PNMA6EA0A0J9YXQ4 647 aa12.64□□□□□ -0.39
HDAC6-226ENST00000483656 CASP7P55210 303 aa12.64□□□□□ -0.39
HDAC6-226ENST00000483656 TCIRG1Q13488 830 aa12.64□□□□□ -0.39
HDAC6-226ENST00000483656 HLFQ16534 295 aa12.64□□□□□ -0.39
HDAC6-226ENST00000483656 SUCLG2Q96I99 432 aa12.64□□□□□ -0.39
HDAC6-226ENST00000483656 C9orf78Q9NZ63 289 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-226ENST00000483656 CNTNAP4Q9C0A0 1308 aa12.63□□□□□ -0.39
HDAC6-226ENST00000483656 TRIM37O94972 964 aa12.63□□□□□ -0.39
HDAC6-226ENST00000483656 PDE4AP27815 886 aa12.63□□□□□ -0.39
HDAC6-226ENST00000483656 NUCB1Q02818 461 aa12.63□□□□□ -0.39
HDAC6-226ENST00000483656 POLA2Q14181 598 aa12.63□□□□□ -0.39
HDAC6-226ENST00000483656 GIGYF2Q6Y7W6 1299 aaKnown RBP12.63□□□□□ -0.39
HDAC6-226ENST00000483656 KIF6Q6ZMV9 814 aa12.63□□□□□ -0.39
HDAC6-226ENST00000483656 PELP1Q8IZL8 1130 aaKnown RBP12.63□□□□□ -0.39
HDAC6-226ENST00000483656 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-226ENST00000483656 GCC1Q96CN9 775 aa12.63□□□□□ -0.39
HDAC6-226ENST00000483656 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-226ENST00000483656 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
HDAC6-226ENST00000483656 ERVV-1B6SEH8 477 aa12.62□□□□□ -0.39
HDAC6-226ENST00000483656 H7C1W4 665 aa12.62□□□□□ -0.39
HDAC6-226ENST00000483656 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
HDAC6-226ENST00000483656 MTX1Q13505 466 aa12.62□□□□□ -0.39
HDAC6-226ENST00000483656 EPHA10Q5JZY3 1008 aa12.62□□□□□ -0.39
HDAC6-226ENST00000483656 RC3H1Q5TC82 1133 aaKnown RBP12.62□□□□□ -0.39
HDAC6-226ENST00000483656 PPP1R42Q7Z4L9 355 aa12.62□□□□□ -0.39
HDAC6-226ENST00000483656 DZIP3Q86Y13 1208 aaKnown RBP12.62□□□□□ -0.39
HDAC6-226ENST00000483656 SSH3Q8TE77 659 aa12.62□□□□□ -0.39
HDAC6-226ENST00000483656 COL15A1P39059 1388 aa12.61□□□□□ -0.39
HDAC6-226ENST00000483656 AFDNP55196 1824 aaKnown RBP12.61□□□□□ -0.39
HDAC6-226ENST00000483656 A0A087WZG4 1122 aa12.61□□□□□ -0.39
HDAC6-226ENST00000483656 HMMRO75330 724 aa12.61□□□□□ -0.39
HDAC6-226ENST00000483656 CAMTA2O94983 1202 aa12.61□□□□□ -0.39
HDAC6-226ENST00000483656 CCDC191Q8NCU4 936 aa12.61□□□□□ -0.39
HDAC6-226ENST00000483656 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
HDAC6-226ENST00000483656 CWC25Q9NXE8 425 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-226ENST00000483656 RGS3P49796 1198 aa12.6□□□□□ -0.39
HDAC6-226ENST00000483656 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
HDAC6-226ENST00000483656 CHD1LQ86WJ1 897 aa12.6□□□□□ -0.39
HDAC6-226ENST00000483656 ARXQ96QS3 562 aa12.6□□□□□ -0.39
HDAC6-226ENST00000483656 BICC1Q9H694 974 aaKnown RBP12.6□□□□□ -0.39
HDAC6-226ENST00000483656 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
HDAC6-226ENST00000483656 RPS6KA4O75676 772 aa12.59□□□□□ -0.39
HDAC6-226ENST00000483656 ANKRD45Q5TZF3 282 aa12.59□□□□□ -0.39
HDAC6-226ENST00000483656 UBE3BQ7Z3V4 1068 aa12.59□□□□□ -0.39
HDAC6-226ENST00000483656 NLRP10Q86W26 655 aa12.59□□□□□ -0.39
HDAC6-226ENST00000483656 AMIGO3Q86WK7 504 aa12.59□□□□□ -0.39
HDAC6-226ENST00000483656 ZNF34Q8IZ26 560 aa12.59□□□□□ -0.39
HDAC6-226ENST00000483656 PROM2Q8N271 834 aa12.59□□□□□ -0.39
HDAC6-226ENST00000483656 LNPKQ9C0E8 428 aa12.59□□□□□ -0.39
HDAC6-226ENST00000483656 HDAC5Q9UQL6 1122 aa12.59□□□□□ -0.39
HDAC6-226ENST00000483656 NUP98P52948 1817 aa12.58□□□□□ -0.4
HDAC6-226ENST00000483656 SRGAP3O43295 1099 aa12.58□□□□□ -0.4
HDAC6-226ENST00000483656 GPTP24298 496 aa12.58□□□□□ -0.4
HDAC6-226ENST00000483656 FOXO4P98177 505 aa12.58□□□□□ -0.4
HDAC6-226ENST00000483656 RABL6Q3YEC7 729 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-226ENST00000483656 HSP90AB3PQ58FF7 597 aa12.58□□□□□ -0.4
HDAC6-226ENST00000483656 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 322.1 ms