RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 NUP155O75694 1391 aa10.73□□□□□ -0.69
LINC00888-203ENST00000482098 EML3Q32P44 896 aa10.72□□□□□ -0.69
LINC00888-203ENST00000482098 SAMD7Q7Z3H4 446 aa10.72□□□□□ -0.69
LINC00888-203ENST00000482098 TRIM50Q86XT4 487 aa10.72□□□□□ -0.69
LINC00888-203ENST00000482098 C1orf216Q8TAB5 229 aa10.72□□□□□ -0.69
LINC00888-203ENST00000482098 SLC27A5Q9Y2P5 690 aa10.72□□□□□ -0.69
LINC00888-203ENST00000482098 MARF1Q9Y4F3 1742 aaKnown RBP10.72□□□□□ -0.69
LINC00888-203ENST00000482098 ATP1A2P50993 1020 aa10.71□□□□□ -0.69
LINC00888-203ENST00000482098 DPYDQ12882 1025 aa10.71□□□□□ -0.69
LINC00888-203ENST00000482098 MAP7D1Q3KQU3 841 aa10.71□□□□□ -0.69
LINC00888-203ENST00000482098 PLPP7Q8NBV4 271 aa10.71□□□□□ -0.69
LINC00888-203ENST00000482098 GPSM3Q9Y4H4 160 aa10.71□□□□□ -0.69
LINC00888-203ENST00000482098 UTRNP46939 3433 aa10.7□□□□□ -0.7
LINC00888-203ENST00000482098 PTK2Q05397 1052 aa10.7□□□□□ -0.7
LINC00888-203ENST00000482098 FAM50AQ14320 339 aaKnown RBP10.7□□□□□ -0.7
LINC00888-203ENST00000482098 R3HDM1Q15032 1099 aaKnown RBP10.7□□□□□ -0.7
LINC00888-203ENST00000482098 NOM1Q5C9Z4 860 aaKnown RBP10.7□□□□□ -0.7
LINC00888-203ENST00000482098 OGFOD1Q8N543 542 aa10.7□□□□□ -0.7
LINC00888-203ENST00000482098 CDC42BPGQ6DT37 1551 aa10.69□□□□□ -0.7
LINC00888-203ENST00000482098 NEXMIFQ5QGS0 1516 aa10.69□□□□□ -0.7
LINC00888-203ENST00000482098 CCDC144AA2RUR9 1427 aa10.69□□□□□ -0.7
LINC00888-203ENST00000482098 RPGRIP1LQ68CZ1 1315 aa10.69□□□□□ -0.7
LINC00888-203ENST00000482098 CDK11BP21127 795 aaKnown RBP10.69□□□□□ -0.7
LINC00888-203ENST00000482098 NPAS4Q8IUM7 802 aa10.69□□□□□ -0.7
LINC00888-203ENST00000482098 USB1Q9BQ65 265 aaKnown RBP10.69□□□□□ -0.7
LINC00888-203ENST00000482098 EGFL7Q9UHF1 273 aa10.69□□□□□ -0.7
LINC00888-203ENST00000482098 RBM19Q9Y4C8 960 aaKnown RBP10.69□□□□□ -0.7
LINC00888-203ENST00000482098 PARD3Q8TEW0 1356 aa10.68□□□□□ -0.7
LINC00888-203ENST00000482098 F12P00748 615 aaPredicted RBP10.68□□□□□ -0.7
LINC00888-203ENST00000482098 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
LINC00888-203ENST00000482098 PUS10Q3MIT2 529 aaKnown RBP10.68□□□□□ -0.7
LINC00888-203ENST00000482098 ARMC2Q8NEN0 867 aa10.68□□□□□ -0.7
LINC00888-203ENST00000482098 DNAAF2Q9NVR5 837 aaKnown RBP10.68□□□□□ -0.7
LINC00888-203ENST00000482098 PCDHB9Q9Y5E1 797 aa10.68□□□□□ -0.7
LINC00888-203ENST00000482098 BRWD3Q6RI45 1802 aa10.68□□□□□ -0.7
LINC00888-203ENST00000482098 ACTN4O43707 911 aaKnown RBP10.67□□□□□ -0.7
LINC00888-203ENST00000482098 VAMP1P23763 118 aa10.67□□□□□ -0.7
LINC00888-203ENST00000482098 CTHP32929 405 aa10.67□□□□□ -0.7
LINC00888-203ENST00000482098 XPCQ01831 940 aaPredicted RBP10.67□□□□□ -0.7
LINC00888-203ENST00000482098 PSME1Q06323 249 aa10.67□□□□□ -0.7
LINC00888-203ENST00000482098 PHTF2Q8N3S3 785 aa10.67□□□□□ -0.7
LINC00888-203ENST00000482098 GPKOWQ92917 476 aaPredicted RBP eCLIP10.67□□□□□ -0.75e-7■■■■■ 43.5
LINC00888-203ENST00000482098 ZNF594Q96JF6 807 aaPredicted RBP10.67□□□□□ -0.7
LINC00888-203ENST00000482098 PRR14Q9BWN1 585 aa10.67□□□□□ -0.7
LINC00888-203ENST00000482098 SLC4A5Q9BY07 1137 aa10.67□□□□□ -0.7
LINC00888-203ENST00000482098 NOD1Q9Y239 953 aa10.67□□□□□ -0.7
LINC00888-203ENST00000482098 USP32Q8NFA0 1604 aa10.66□□□□□ -0.7
LINC00888-203ENST00000482098 ABL1P00519 1130 aa10.66□□□□□ -0.7
LINC00888-203ENST00000482098 HOXB1P14653 301 aaPredicted RBP10.66□□□□□ -0.7
LINC00888-203ENST00000482098 PTPRNQ16849 979 aa10.66□□□□□ -0.7
LINC00888-203ENST00000482098 PDXDC2PQ6P474 469 aa10.66□□□□□ -0.7
LINC00888-203ENST00000482098 LAPTM4BQ86VI4 370 aa10.66□□□□□ -0.7
LINC00888-203ENST00000482098 LARGE2Q8N3Y3 721 aa10.66□□□□□ -0.7
LINC00888-203ENST00000482098 MAP10Q9P2G4 905 aa10.66□□□□□ -0.7
LINC00888-203ENST00000482098 KCNH2Q12809 1159 aa10.65□□□□□ -0.7
LINC00888-203ENST00000482098 IFFO2Q5TF58 517 aa10.65□□□□□ -0.7
LINC00888-203ENST00000482098 KRT28Q7Z3Y7 464 aa10.65□□□□□ -0.7
LINC00888-203ENST00000482098 DRC1Q96MC2 740 aa10.65□□□□□ -0.7
LINC00888-203ENST00000482098 CAMKK2Q96RR4 588 aa10.65□□□□□ -0.7
LINC00888-203ENST00000482098 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.7
LINC00888-203ENST00000482098 SBNO1A3KN83 1393 aa10.65□□□□□ -0.71
LINC00888-203ENST00000482098 ARHGEF10O15013 1369 aa10.65□□□□□ -0.71
LINC00888-203ENST00000482098 NINLQ9Y2I6 1382 aa10.65□□□□□ -0.71
LINC00888-203ENST00000482098 NWD2Q9ULI1 1742 aa10.64□□□□□ -0.71
LINC00888-203ENST00000482098 PSEN2P49810 448 aa10.64□□□□□ -0.71
LINC00888-203ENST00000482098 RNF19BQ6ZMZ0 732 aa10.64□□□□□ -0.71
LINC00888-203ENST00000482098 GLYCTKQ8IVS8 523 aa10.64□□□□□ -0.71
LINC00888-203ENST00000482098 TECPR2O15040 1411 aa10.64□□□□□ -0.71
LINC00888-203ENST00000482098 NAIPQ13075 1403 aa10.64□□□□□ -0.71
LINC00888-203ENST00000482098 TNS3Q68CZ2 1445 aa10.64□□□□□ -0.71
LINC00888-203ENST00000482098 FAM83GA6ND36 823 aa10.63□□□□□ -0.71
LINC00888-203ENST00000482098 H3BRB1 525 aa10.63□□□□□ -0.71
LINC00888-203ENST00000482098 SREK1Q8WXA9 508 aaKnown RBP10.63□□□□□ -0.71
LINC00888-203ENST00000482098 NBPF3Q9H094 633 aa10.63□□□□□ -0.71
LINC00888-203ENST00000482098 TUT1Q9H6E5 874 aaKnown RBP10.63□□□□□ -0.71
LINC00888-203ENST00000482098 ABCC11Q96J66 1382 aa10.63□□□□□ -0.71
LINC00888-203ENST00000482098 A0A0G2JS52 829 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 SNPHO15079 494 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 PRMT3O60678 531 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 JUNDP17535 347 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 SCNN1AP37088 669 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 SEC13P55735 322 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 CLDN10P78369 228 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 MYT1Q01538 1121 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 EZH2Q15910 746 aaKnown RBP10.62□□□□□ -0.71
LINC00888-203ENST00000482098 NBPF14Q5TI25 921 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 BLOC1S3Q6QNY0 202 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 FAM196AQ6ZSG2 479 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 TAS1R3Q7RTX0 852 aa10.62□□□□□ -0.71
LINC00888-203ENST00000482098 FAM177A1Q8N128 213 aaPredicted RBP10.62□□□□□ -0.71
LINC00888-203ENST00000482098 CXXC1Q9P0U4 656 aaPredicted RBP10.62□□□□□ -0.71
LINC00888-203ENST00000482098 RGPD1P0DJD0 1748 aa10.61□□□□□ -0.71
LINC00888-203ENST00000482098 ARHGAP33O14559 1287 aa10.61□□□□□ -0.71
LINC00888-203ENST00000482098 ICMTO60725 284 aa10.61□□□□□ -0.71
LINC00888-203ENST00000482098 MAPK1P28482 360 aa10.61□□□□□ -0.71
LINC00888-203ENST00000482098 NBPF8Q3BBV2 869 aa10.61□□□□□ -0.71
LINC00888-203ENST00000482098 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
LINC00888-203ENST00000482098 ZSCAN29Q8IWY8 852 aaPredicted RBP10.61□□□□□ -0.71
LINC00888-203ENST00000482098 SPON1Q9HCB6 807 aa10.61□□□□□ -0.71
LINC00888-203ENST00000482098 SPATA31A5Q5VU36 1347 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms