RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 PTCD1O75127 700 aaKnown RBP24.34■■□□□ 1.49
CHKB-209ENST00000481673 NBPF14Q5TI25 921 aa24.34■■□□□ 1.49
CHKB-209ENST00000481673 NBPF10Q6P3W6 841 aaKnown RBP24.34■■□□□ 1.49
CHKB-209ENST00000481673 HSCBQ8IWL3 235 aa24.34■■□□□ 1.49
CHKB-209ENST00000481673 NBPF15Q8N660 670 aa24.34■■□□□ 1.49
CHKB-209ENST00000481673 BICC1Q9H694 974 aaKnown RBP24.34■■□□□ 1.49
CHKB-209ENST00000481673 TTC41PQ6P2S7 1318 aa24.34■■□□□ 1.49
CHKB-209ENST00000481673 USP42Q9H9J4 1324 aaKnown RBP24.34■■□□□ 1.49
CHKB-209ENST00000481673 ERC2O15083 957 aa24.34■■□□□ 1.49
CHKB-209ENST00000481673 KAZALD1Q96I82 304 aa24.34■■□□□ 1.49
CHKB-209ENST00000481673 IL1RAPL2Q9NP60 686 aa24.34■■□□□ 1.49
CHKB-209ENST00000481673 COL16A1Q07092 1604 aaPredicted RBP24.33■■□□□ 1.49
CHKB-209ENST00000481673 EPB41L2O43491 1005 aaKnown RBP24.32■■□□□ 1.48
CHKB-209ENST00000481673 G3BP1Q13283 466 aaKnown RBP eCLIP24.32■■□□□ 1.48
CHKB-209ENST00000481673 RTL5Q5HYW3 569 aaPredicted RBP24.32■■□□□ 1.48
CHKB-209ENST00000481673 PIGBQ92521 554 aa24.32■■□□□ 1.48
CHKB-209ENST00000481673 GPATCH3Q96I76 525 aa24.32■■□□□ 1.48
CHKB-209ENST00000481673 USP26Q9BXU7 913 aa24.32■■□□□ 1.48
CHKB-209ENST00000481673 PLCH1Q4KWH8 1693 aa24.32■■□□□ 1.48
CHKB-209ENST00000481673 LRP6O75581 1613 aa24.32■■□□□ 1.48
CHKB-209ENST00000481673 STARD3NLO95772 234 aa24.32■■□□□ 1.48
CHKB-209ENST00000481673 RABL6Q3YEC7 729 aaPredicted RBP24.3■■□□□ 1.48
CHKB-209ENST00000481673 PHLPP1O60346 1717 aa24.3■■□□□ 1.48
CHKB-209ENST00000481673 TRIM6-TRIM34B2RNG4 842 aa24.29■■□□□ 1.48
CHKB-209ENST00000481673 GLRX3O76003 335 aaKnown RBP24.29■■□□□ 1.48
CHKB-209ENST00000481673 A1BGP04217 495 aa24.29■■□□□ 1.48
CHKB-209ENST00000481673 CCDC191Q8NCU4 936 aa24.29■■□□□ 1.48
CHKB-209ENST00000481673 KIF2CQ99661 725 aa24.29■■□□□ 1.48
CHKB-209ENST00000481673 A0A087WZG4 1122 aa24.28■■□□□ 1.48
CHKB-209ENST00000481673 NBR1Q14596 966 aa24.28■■□□□ 1.48
CHKB-209ENST00000481673 IL27Q8NEV9 243 aa24.28■■□□□ 1.48
CHKB-209ENST00000481673 ATG3Q9NT62 314 aa24.28■■□□□ 1.48
CHKB-209ENST00000481673 SPATA31A1Q5TZJ5 1347 aa24.28■■□□□ 1.48
CHKB-209ENST00000481673 BCL9O00512 1426 aa24.28■■□□□ 1.48
CHKB-209ENST00000481673 PIP4K2AP48426 406 aaPredicted RBP24.28■■□□□ 1.48
CHKB-209ENST00000481673 RABEP1Q15276 862 aa24.28■■□□□ 1.48
CHKB-209ENST00000481673 NUTM1Q86Y26 1132 aa24.28■■□□□ 1.48
CHKB-209ENST00000481673 COPRSQ9NQ92 184 aa24.28■■□□□ 1.48
CHKB-209ENST00000481673 CWC25Q9NXE8 425 aaPredicted RBP24.28■■□□□ 1.48
CHKB-209ENST00000481673 H7C1W4 665 aa24.27■■□□□ 1.48
CHKB-209ENST00000481673 PI4K2BQ8TCG2 481 aa24.27■■□□□ 1.48
CHKB-209ENST00000481673 RILPL2Q969X0 211 aa24.27■■□□□ 1.48
CHKB-209ENST00000481673 IFIT2P09913 472 aaKnown RBP24.26■■□□□ 1.47
CHKB-209ENST00000481673 CNTROBQ8N137 903 aa24.26■■□□□ 1.47
CHKB-209ENST00000481673 ASAP1Q9ULH1 1129 aa24.26■■□□□ 1.47
CHKB-209ENST00000481673 ADAMTS2O95450 1211 aa24.26■■□□□ 1.47
CHKB-209ENST00000481673 CHMLP26374 656 aa24.26■■□□□ 1.47
CHKB-209ENST00000481673 ECHDC1Q9NTX5 307 aa24.26■■□□□ 1.47
CHKB-209ENST00000481673 TOGARAM1Q9Y4F4 1720 aa24.25■■□□□ 1.47
CHKB-209ENST00000481673 UBE3BQ7Z3V4 1068 aa24.25■■□□□ 1.47
CHKB-209ENST00000481673 ESYT1Q9BSJ8 1104 aa24.25■■□□□ 1.47
CHKB-209ENST00000481673 CASP7P55210 303 aa24.24■■□□□ 1.47
CHKB-209ENST00000481673 TRIM28Q13263 835 aaKnown RBP24.24■■□□□ 1.47
CHKB-209ENST00000481673 TSHZ3Q63HK5 1081 aa24.24■■□□□ 1.47
CHKB-209ENST00000481673 BARGINQ6ZT62 677 aa24.24■■□□□ 1.47
CHKB-209ENST00000481673 TTLL7Q6ZT98 887 aa24.24■■□□□ 1.47
CHKB-209ENST00000481673 ATP5J2-PTCD1G3V325 749 aa24.24■■□□□ 1.47
CHKB-209ENST00000481673 DDB1Q16531 1140 aa24.24■■□□□ 1.47
CHKB-209ENST00000481673 ANTXR1Q9H6X2 564 aa24.24■■□□□ 1.47
CHKB-209ENST00000481673 PA2G4Q9UQ80 394 aaKnown RBP24.24■■□□□ 1.47
CHKB-209ENST00000481673 ARFGEF2Q9Y6D5 1785 aa24.23■■□□□ 1.47
CHKB-209ENST00000481673 MCCP23508 829 aa24.22■■□□□ 1.47
CHKB-209ENST00000481673 SPATA31A5Q5VU36 1347 aa24.22■■□□□ 1.47
CHKB-209ENST00000481673 SPATA31A7Q8IWB4 1347 aa24.22■■□□□ 1.47
CHKB-209ENST00000481673 KIF6Q6ZMV9 814 aa24.21■■□□□ 1.47
CHKB-209ENST00000481673 RBM42Q9BTD8 480 aaKnown RBP24.21■■□□□ 1.47
CHKB-209ENST00000481673 SASH1O94885 1247 aa24.21■■□□□ 1.47
CHKB-209ENST00000481673 TCIRG1Q13488 830 aa24.21■■□□□ 1.47
CHKB-209ENST00000481673 EPHA10Q5JZY3 1008 aa24.21■■□□□ 1.47
CHKB-209ENST00000481673 DNAJC10Q8IXB1 793 aa24.21■■□□□ 1.47
CHKB-209ENST00000481673 PIP4K2BP78356 416 aa24.2■■□□□ 1.46
CHKB-209ENST00000481673 NFKBIBQ15653 356 aa24.19■■□□□ 1.46
CHKB-209ENST00000481673 AACSQ86V21 672 aa24.19■■□□□ 1.46
CHKB-209ENST00000481673 ISCA1Q9BUE6 129 aa24.19■■□□□ 1.46
CHKB-209ENST00000481673 SLIT2O94813 1529 aa24.19■■□□□ 1.46
CHKB-209ENST00000481673 RFX5P48382 616 aaPredicted RBP24.19■■□□□ 1.46
CHKB-209ENST00000481673 ANAPC15P60006 121 aa24.19■■□□□ 1.46
CHKB-209ENST00000481673 PTPN12Q05209 780 aaKnown RBP24.19■■□□□ 1.46
CHKB-209ENST00000481673 ZBTB3Q9H5J0 574 aa24.19■■□□□ 1.46
CHKB-209ENST00000481673 HSP90AB3PQ58FF7 597 aa24.18■■□□□ 1.46
CHKB-209ENST00000481673 SLKQ9H2G2 1235 aaPredicted RBP24.18■■□□□ 1.46
CHKB-209ENST00000481673 TUBGCP6Q96RT7 1819 aa24.18■■□□□ 1.46
CHKB-209ENST00000481673 K7ELQ4 463 aaPredicted RBP24.17■■□□□ 1.46
CHKB-209ENST00000481673 CHMP5Q9NZZ3 219 aa24.17■■□□□ 1.46
CHKB-209ENST00000481673 NRAPQ86VF7 1730 aa24.17■■□□□ 1.46
CHKB-209ENST00000481673 NWD2Q9ULI1 1742 aa24.17■■□□□ 1.46
CHKB-209ENST00000481673 NUTM2BA6NNL0 878 aaPredicted RBP24.17■■□□□ 1.46
CHKB-209ENST00000481673 NUTM2EB1AL46 878 aaPredicted RBP24.17■■□□□ 1.46
CHKB-209ENST00000481673 CYP19A1P11511 503 aaPredicted RBP24.17■■□□□ 1.46
CHKB-209ENST00000481673 PRIM1P49642 420 aaKnown RBP24.17■■□□□ 1.46
CHKB-209ENST00000481673 UNC5CLQ8IV45 518 aa24.17■■□□□ 1.46
CHKB-209ENST00000481673 NUTM2AQ8IVF1 878 aaPredicted RBP24.17■■□□□ 1.46
CHKB-209ENST00000481673 RUFY2Q8WXA3 655 aa24.17■■□□□ 1.46
CHKB-209ENST00000481673 EVI5LQ96CN4 794 aa24.17■■□□□ 1.46
CHKB-209ENST00000481673 WNK3Q9BYP7 1800 aa24.16■■□□□ 1.46
CHKB-209ENST00000481673 HIP1O00291 1037 aa24.16■■□□□ 1.46
CHKB-209ENST00000481673 ST18O60284 1047 aa24.16■■□□□ 1.46
CHKB-209ENST00000481673 FOXO4P98177 505 aa24.16■■□□□ 1.46
CHKB-209ENST00000481673 UBAP1LF5GYI3 381 aa24.15■■□□□ 1.46
CHKB-209ENST00000481673 LMBR1LQ6UX01 489 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms