RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 MAP3K11Q16584 847 aa17.07■□□□□ 0.32
NR1H3-220ENST00000481020 SCAND2PQ9GZW5 306 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-220ENST00000481020 DDX19AQ9NUU7 478 aaKnown RBP17.07■□□□□ 0.32
NR1H3-220ENST00000481020 PAXBP1Q9Y5B6 917 aa17.07■□□□□ 0.32
NR1H3-220ENST00000481020 FIBPO43427 364 aa17.06■□□□□ 0.32
NR1H3-220ENST00000481020 SURF6O75683 361 aaKnown RBP17.06■□□□□ 0.32
NR1H3-220ENST00000481020 ZKSCAN1P17029 563 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-220ENST00000481020 PSMA5P28066 241 aa17.06■□□□□ 0.32
NR1H3-220ENST00000481020 GJB2P29033 226 aa17.06■□□□□ 0.32
NR1H3-220ENST00000481020 TAF3Q5VWG9 929 aa17.06■□□□□ 0.32
NR1H3-220ENST00000481020 RBM43Q6ZSC3 357 aaKnown RBP17.06■□□□□ 0.32
NR1H3-220ENST00000481020 ERC1Q8IUD2 1116 aa17.06■□□□□ 0.32
NR1H3-220ENST00000481020 PDRG1Q9NUG6 133 aa17.06■□□□□ 0.32
NR1H3-220ENST00000481020 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-220ENST00000481020 PPP4R3BQ5MIZ7 849 aa17.05■□□□□ 0.32
NR1H3-220ENST00000481020 ZNF830Q96NB3 372 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-220ENST00000481020 SNRKQ9NRH2 765 aa17.05■□□□□ 0.32
NR1H3-220ENST00000481020 SMTNL1A8MU46 457 aa17.04■□□□□ 0.32
NR1H3-220ENST00000481020 CDC25BP30305 580 aa17.04■□□□□ 0.32
NR1H3-220ENST00000481020 GIMAP6Q6P9H5 292 aa17.04■□□□□ 0.32
NR1H3-220ENST00000481020 PPP1R42Q7Z4L9 355 aa17.04■□□□□ 0.32
NR1H3-220ENST00000481020 NUP62CLQ9H1M0 184 aa17.04■□□□□ 0.32
NR1H3-220ENST00000481020 KCNF1Q9H3M0 494 aa17.04■□□□□ 0.32
NR1H3-220ENST00000481020 NPHP3Q7Z494 1330 aa17.04■□□□□ 0.32
NR1H3-220ENST00000481020 NEMFO60524 1076 aa17.04■□□□□ 0.32
NR1H3-220ENST00000481020 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
NR1H3-220ENST00000481020 RASEFQ8IZ41 740 aa17.04■□□□□ 0.32
NR1H3-220ENST00000481020 IL25Q9H293 177 aa17.04■□□□□ 0.32
NR1H3-220ENST00000481020 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-220ENST00000481020 MIS18AQ9NYP9 233 aa17.04■□□□□ 0.32
NR1H3-220ENST00000481020 RIOK3O14730 519 aaKnown RBP17.03■□□□□ 0.32
NR1H3-220ENST00000481020 DNM1Q05193 864 aaKnown RBP17.03■□□□□ 0.32
NR1H3-220ENST00000481020 FER1L4A9Z1Z3 1794 aa17.03■□□□□ 0.32
NR1H3-220ENST00000481020 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.32
NR1H3-220ENST00000481020 GIGYF1O75420 1035 aaPredicted RBP17.02■□□□□ 0.32
NR1H3-220ENST00000481020 FOXD4L6Q3SYB3 417 aaPredicted RBP17.02■□□□□ 0.32
NR1H3-220ENST00000481020 FOXD4L3Q6VB84 417 aaPredicted RBP17.02■□□□□ 0.32
NR1H3-220ENST00000481020 NUTM1Q86Y26 1132 aa17.02■□□□□ 0.32
NR1H3-220ENST00000481020 EVI5LQ96CN4 794 aa17.02■□□□□ 0.32
NR1H3-220ENST00000481020 IL1RAPL2Q9NP60 686 aa17.02■□□□□ 0.32
NR1H3-220ENST00000481020 OGFRQ9NZT2 677 aa17.02■□□□□ 0.32
NR1H3-220ENST00000481020 NCKAP5LQ9HCH0 1330 aa17.02■□□□□ 0.32
NR1H3-220ENST00000481020 USP54Q70EL1 1684 aa17.02■□□□□ 0.32
NR1H3-220ENST00000481020 FAM193AP78312 1265 aa17.01■□□□□ 0.31
NR1H3-220ENST00000481020 CLASRPQ8N2M8 674 aaKnown RBP17.01■□□□□ 0.31
NR1H3-220ENST00000481020 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
NR1H3-220ENST00000481020 EYA1Q99502 592 aa17.01■□□□□ 0.31
NR1H3-220ENST00000481020 CGNQ9P2M7 1197 aaKnown RBP17.01■□□□□ 0.31
NR1H3-220ENST00000481020 CEP170BQ9Y4F5 1589 aaPredicted RBP17.01■□□□□ 0.31
NR1H3-220ENST00000481020 SRGAP3O43295 1099 aa17.01■□□□□ 0.31
NR1H3-220ENST00000481020 FOXO3O43524 673 aa17.01■□□□□ 0.31
NR1H3-220ENST00000481020 TYRO3Q06418 890 aa17.01■□□□□ 0.31
NR1H3-220ENST00000481020 NECTIN1Q15223 517 aa17.01■□□□□ 0.31
NR1H3-220ENST00000481020 RNF20Q5VTR2 975 aa17.01■□□□□ 0.31
NR1H3-220ENST00000481020 ECHDC1Q9NTX5 307 aa17.01■□□□□ 0.31
NR1H3-220ENST00000481020 PYCARDQ9ULZ3 195 aa17.01■□□□□ 0.31
NR1H3-220ENST00000481020 TMEM2Q9UHN6 1383 aa17■□□□□ 0.31
NR1H3-220ENST00000481020 SIPA1L2Q9P2F8 1722 aaPredicted RBP17■□□□□ 0.31
NR1H3-220ENST00000481020 CEBPAP49715 358 aaPredicted RBP17■□□□□ 0.31
NR1H3-220ENST00000481020 GABPB1Q06547 395 aaPredicted RBP17■□□□□ 0.31
NR1H3-220ENST00000481020 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
NR1H3-220ENST00000481020 PLA2G4DQ86XP0 818 aa17■□□□□ 0.31
NR1H3-220ENST00000481020 CCDC83Q8IWF9 413 aa17■□□□□ 0.31
NR1H3-220ENST00000481020 JAKMIP1Q96N16 626 aaKnown RBP17■□□□□ 0.31
NR1H3-220ENST00000481020 MRVI1Q9Y6F6 885 aa17■□□□□ 0.31
NR1H3-220ENST00000481020 RIMS1Q86UR5 1692 aaKnown RBP17■□□□□ 0.31
NR1H3-220ENST00000481020 LARP1BQ659C4 914 aaKnown RBP16.99■□□□□ 0.31
NR1H3-220ENST00000481020 CWC27Q6UX04 472 aaKnown RBP16.99■□□□□ 0.31
NR1H3-220ENST00000481020 HMG20BQ9P0W2 317 aa16.99■□□□□ 0.31
NR1H3-220ENST00000481020 TCHHQ07283 1943 aa16.99■□□□□ 0.31
NR1H3-220ENST00000481020 PLEKHG1Q9ULL1 1385 aa16.99■□□□□ 0.31
NR1H3-220ENST00000481020 ADAMTS13Q76LX8 1427 aa16.99■□□□□ 0.31
NR1H3-220ENST00000481020 MED1Q15648 1581 aaPredicted RBP16.99■□□□□ 0.31
NR1H3-220ENST00000481020 AP5Z1O43299 807 aa16.99■□□□□ 0.31
NR1H3-220ENST00000481020 AMPHP49418 695 aa16.99■□□□□ 0.31
NR1H3-220ENST00000481020 TSGA10IPQ3SY00 556 aa16.99■□□□□ 0.31
NR1H3-220ENST00000481020 TNMDQ9H2S6 317 aa16.99■□□□□ 0.31
NR1H3-220ENST00000481020 CLSTN2Q9H4D0 955 aa16.99■□□□□ 0.31
NR1H3-220ENST00000481020 GOLGA6L4A6NEF3 574 aa16.98■□□□□ 0.31
NR1H3-220ENST00000481020 ALDH1L1O75891 902 aa16.98■□□□□ 0.31
NR1H3-220ENST00000481020 DHX8Q14562 1220 aaKnown RBP16.98■□□□□ 0.31
NR1H3-220ENST00000481020 SARM1Q6SZW1 724 aa16.98■□□□□ 0.31
NR1H3-220ENST00000481020 MAP4K1Q92918 833 aa16.98■□□□□ 0.31
NR1H3-220ENST00000481020 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
NR1H3-220ENST00000481020 CTAGE5O15320 804 aa16.97■□□□□ 0.31
NR1H3-220ENST00000481020 ZNF75DP51815 510 aa16.97■□□□□ 0.31
NR1H3-220ENST00000481020 PLCB2Q00722 1185 aa16.97■□□□□ 0.31
NR1H3-220ENST00000481020 ATP2B3Q16720 1220 aa16.97■□□□□ 0.31
NR1H3-220ENST00000481020 BEND3Q5T5X7 828 aa16.97■□□□□ 0.31
NR1H3-220ENST00000481020 TTC6Q86TZ1 520 aa16.97■□□□□ 0.31
NR1H3-220ENST00000481020 CREBRFQ8IUR6 639 aa16.97■□□□□ 0.31
NR1H3-220ENST00000481020 C17orf53Q8N3J3 647 aaPredicted RBP16.97■□□□□ 0.31
NR1H3-220ENST00000481020 DNAAF4Q8WXU2 420 aa16.97■□□□□ 0.31
NR1H3-220ENST00000481020 KCND1Q9NSA2 647 aa16.97■□□□□ 0.31
NR1H3-220ENST00000481020 VPS37CA5D8V6 355 aaPredicted RBP16.96■□□□□ 0.31
NR1H3-220ENST00000481020 CBX1P83916 185 aa16.96■□□□□ 0.31
NR1H3-220ENST00000481020 NWD1Q149M9 1564 aa16.96■□□□□ 0.31
NR1H3-220ENST00000481020 ME3Q16798 604 aa16.96■□□□□ 0.31
NR1H3-220ENST00000481020 KIF2AO00139 706 aaPredicted RBP16.96■□□□□ 0.3
NR1H3-220ENST00000481020 LARGE1O95461 756 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms