RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 CT47B1P0C2W7 299 aaPredicted RBP12.39□□□□□ -0.43
CD46-214ENST00000480003 HMGB2P26583 209 aaKnown RBP12.39□□□□□ -0.43
CD46-214ENST00000480003 EP400Q96L91 3159 aa12.38□□□□□ -0.43
CD46-214ENST00000480003 KDM3BQ7LBC6 1761 aa12.38□□□□□ -0.43
CD46-214ENST00000480003 PDIA6Q15084 440 aa12.38□□□□□ -0.43
CD46-214ENST00000480003 INTS5Q6P9B9 1019 aaKnown RBP12.38□□□□□ -0.43
CD46-214ENST00000480003 LINC00116Q8NCU8 138 aa12.38□□□□□ -0.43
CD46-214ENST00000480003 PAPPAQ13219 1627 aa12.37□□□□□ -0.43
CD46-214ENST00000480003 STARD3NLO95772 234 aa12.37□□□□□ -0.43
CD46-214ENST00000480003 A1BGP04217 495 aa12.37□□□□□ -0.43
CD46-214ENST00000480003 EIF2S2P20042 333 aaKnown RBP12.37□□□□□ -0.43
CD46-214ENST00000480003 CHMP4AQ9BY43 222 aa12.37□□□□□ -0.43
CD46-214ENST00000480003 NBPF26B4DH59 902 aa12.36□□□□□ -0.43
CD46-214ENST00000480003 CRKLP46109 303 aaKnown RBP12.36□□□□□ -0.43
CD46-214ENST00000480003 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
CD46-214ENST00000480003 NBPF10Q6P3W6 841 aaKnown RBP12.36□□□□□ -0.43
CD46-214ENST00000480003 NBPF15Q8N660 670 aa12.36□□□□□ -0.43
CD46-214ENST00000480003 ZNF428Q96B54 188 aa12.36□□□□□ -0.43
CD46-214ENST00000480003 OCEL1Q9H607 264 aa12.36□□□□□ -0.43
CD46-214ENST00000480003 UBR2Q8IWV8 1755 aa12.35□□□□□ -0.43
CD46-214ENST00000480003 TNS1Q9HBL0 1735 aaKnown RBP12.35□□□□□ -0.43
CD46-214ENST00000480003 CCDC30Q5VVM6 783 aa12.35□□□□□ -0.43
CD46-214ENST00000480003 LRP10Q7Z4F1 713 aa12.35□□□□□ -0.43
CD46-214ENST00000480003 ERBB4Q15303 1308 aa12.35□□□□□ -0.43
CD46-214ENST00000480003 CNTNAP4Q9C0A0 1308 aa12.35□□□□□ -0.43
CD46-214ENST00000480003 LY75O60449 1722 aa12.34□□□□□ -0.43
CD46-214ENST00000480003 RPS6KA4O75676 772 aa12.34□□□□□ -0.43
CD46-214ENST00000480003 RARSP54136 660 aaKnown RBP12.34□□□□□ -0.43
CD46-214ENST00000480003 EIF5P55010 431 aaKnown RBP12.34□□□□□ -0.43
CD46-214ENST00000480003 BRPF1P55201 1214 aaPredicted RBP12.34□□□□□ -0.43
CD46-214ENST00000480003 ALDH1L2Q3SY69 923 aa12.34□□□□□ -0.43
CD46-214ENST00000480003 HDGFL1Q5TGJ6 251 aa12.34□□□□□ -0.43
CD46-214ENST00000480003 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
CD46-214ENST00000480003 DDX21Q9NR30 783 aaKnown RBP eCLIP12.34□□□□□ -0.43
CD46-214ENST00000480003 CCDC87Q9NVE4 849 aa12.34□□□□□ -0.43
CD46-214ENST00000480003 ZNF831Q5JPB2 1677 aa12.34□□□□□ -0.43
CD46-214ENST00000480003 PROSER3Q2NL68 480 aa12.33□□□□□ -0.44
CD46-214ENST00000480003 SSH1Q8WYL5 1049 aa12.33□□□□□ -0.44
CD46-214ENST00000480003 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
CD46-214ENST00000480003 DBF4Q9UBU7 674 aaPredicted RBP12.33□□□□□ -0.44
CD46-214ENST00000480003 ZBTB1Q9Y2K1 713 aa12.33□□□□□ -0.44
CD46-214ENST00000480003 IL6STP40189 918 aaPredicted RBP12.32□□□□□ -0.44
CD46-214ENST00000480003 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
CD46-214ENST00000480003 SLC15A2Q16348 729 aa12.32□□□□□ -0.44
CD46-214ENST00000480003 ZNF827Q17R98 1081 aa12.32□□□□□ -0.44
CD46-214ENST00000480003 AMIGO3Q86WK7 504 aa12.32□□□□□ -0.44
CD46-214ENST00000480003 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
CD46-214ENST00000480003 CHPF2Q9P2E5 772 aa12.32□□□□□ -0.44
CD46-214ENST00000480003 MYH14Q7Z406 1995 aaKnown RBP12.31□□□□□ -0.44
CD46-214ENST00000480003 TCERG1O14776 1098 aaKnown RBP12.31□□□□□ -0.44
CD46-214ENST00000480003 ANXA1P04083 346 aa12.31□□□□□ -0.44
CD46-214ENST00000480003 CANXP27824 592 aaKnown RBP12.31□□□□□ -0.44
CD46-214ENST00000480003 PIP4K2AP48426 406 aaPredicted RBP12.31□□□□□ -0.44
CD46-214ENST00000480003 PDCD7Q8N8D1 485 aaKnown RBP12.31□□□□□ -0.44
CD46-214ENST00000480003 ANO8Q9HCE9 1232 aaPredicted RBP12.31□□□□□ -0.44
CD46-214ENST00000480003 HYPKQ9NX55 129 aa12.31□□□□□ -0.44
CD46-214ENST00000480003 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
CD46-214ENST00000480003 SMIM5Q71RC9 77 aa12.3□□□□□ -0.44
CD46-214ENST00000480003 G2E3Q7L622 706 aa12.3□□□□□ -0.44
CD46-214ENST00000480003 ARHGEF1Q92888 912 aaKnown RBP12.3□□□□□ -0.44
CD46-214ENST00000480003 PHAXQ9H814 394 aaKnown RBP12.3□□□□□ -0.44
CD46-214ENST00000480003 RTCBQ9Y3I0 505 aaKnown RBP12.3□□□□□ -0.44
CD46-214ENST00000480003 RGPD3A6NKT7 1758 aaPredicted RBP12.3□□□□□ -0.44
CD46-214ENST00000480003 RGPD4Q7Z3J3 1758 aa12.3□□□□□ -0.44
CD46-214ENST00000480003 TJP1Q07157 1748 aa12.29□□□□□ -0.44
CD46-214ENST00000480003 GNPATO15228 680 aa12.29□□□□□ -0.44
CD46-214ENST00000480003 BCAR3O75815 825 aa12.29□□□□□ -0.44
CD46-214ENST00000480003 MYL6BP14649 208 aa12.29□□□□□ -0.44
CD46-214ENST00000480003 TRAPPC3LQ5T215 181 aa12.29□□□□□ -0.44
CD46-214ENST00000480003 COPS6Q7L5N1 327 aa12.29□□□□□ -0.44
CD46-214ENST00000480003 AK7Q96M32 723 aa12.29□□□□□ -0.44
CD46-214ENST00000480003 STK31Q9BXU1 1019 aa12.29□□□□□ -0.44
CD46-214ENST00000480003 RCAN3Q9UKA8 241 aa12.29□□□□□ -0.44
CD46-214ENST00000480003 PSDA5PKW4 1024 aaPredicted RBP12.28□□□□□ -0.44
CD46-214ENST00000480003 SSFA2P28290 1259 aa12.28□□□□□ -0.44
CD46-214ENST00000480003 TTLL7Q6ZT98 887 aa12.28□□□□□ -0.44
CD46-214ENST00000480003 STK32BQ9NY57 414 aa12.28□□□□□ -0.44
CD46-214ENST00000480003 TFCP2L1Q9NZI6 479 aa12.28□□□□□ -0.44
CD46-214ENST00000480003 TAF1LQ8IZX4 1826 aa12.27□□□□□ -0.44
CD46-214ENST00000480003 C5P01031 1676 aa12.27□□□□□ -0.45
CD46-214ENST00000480003 A0A087WZG4 1122 aa12.27□□□□□ -0.45
CD46-214ENST00000480003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.27□□□□□ -0.45
CD46-214ENST00000480003 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
CD46-214ENST00000480003 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.45
CD46-214ENST00000480003 COL23A1Q86Y22 540 aaPredicted RBP12.27□□□□□ -0.45
CD46-214ENST00000480003 FLAD1Q8NFF5 587 aa12.27□□□□□ -0.45
CD46-214ENST00000480003 XAGE3Q8WTP9 111 aa12.27□□□□□ -0.45
CD46-214ENST00000480003 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.45
CD46-214ENST00000480003 ERVV-1B6SEH8 477 aa12.26□□□□□ -0.45
CD46-214ENST00000480003 CAMTA2O94983 1202 aa12.26□□□□□ -0.45
CD46-214ENST00000480003 FLIIQ13045 1269 aa12.26□□□□□ -0.45
CD46-214ENST00000480003 BCL2L13Q9BXK5 485 aa12.26□□□□□ -0.45
CD46-214ENST00000480003 SMC4Q9NTJ3 1288 aa12.26□□□□□ -0.45
CD46-214ENST00000480003 NARFQ9UHQ1 456 aa12.26□□□□□ -0.45
CD46-214ENST00000480003 NOB1Q9ULX3 412 aaKnown RBP12.26□□□□□ -0.45
CD46-214ENST00000480003 TBC1D2BQ9UPU7 963 aa12.26□□□□□ -0.45
CD46-214ENST00000480003 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
CD46-214ENST00000480003 C4BP0C0L5 1744 aa12.25□□□□□ -0.45
CD46-214ENST00000480003 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
CD46-214ENST00000480003 RGL2O15211 777 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms