RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 TRPM7Q96QT4 1865 aa21.11■□□□□ 0.97
HDLBP-238ENST00000479894 RNMTO43148 476 aaKnown RBP21.1■□□□□ 0.97
HDLBP-238ENST00000479894 STARD3NLO95772 234 aa21.1■□□□□ 0.97
HDLBP-238ENST00000479894 SRGNP10124 158 aa21.1■□□□□ 0.97
HDLBP-238ENST00000479894 EAPPQ56P03 285 aaPredicted RBP21.1■□□□□ 0.97
HDLBP-238ENST00000479894 MASTLQ96GX5 879 aa21.1■□□□□ 0.97
HDLBP-238ENST00000479894 LGR6Q9HBX8 967 aa21.1■□□□□ 0.97
HDLBP-238ENST00000479894 PDE4DIPQ5VU43 2346 aa21.1■□□□□ 0.97
HDLBP-238ENST00000479894 CCDC85CA6NKD9 419 aa21.09■□□□□ 0.97
HDLBP-238ENST00000479894 EPHX2P34913 555 aa21.09■□□□□ 0.97
HDLBP-238ENST00000479894 CLEC11AQ9Y240 323 aa21.09■□□□□ 0.97
HDLBP-238ENST00000479894 CNTROBQ8N137 903 aa21.08■□□□□ 0.97
HDLBP-238ENST00000479894 BCORQ6W2J9 1755 aa21.08■□□□□ 0.96
HDLBP-238ENST00000479894 CCDC93Q567U6 631 aa21.07■□□□□ 0.96
HDLBP-238ENST00000479894 CNBD1Q8NA66 436 aa21.07■□□□□ 0.96
HDLBP-238ENST00000479894 C7orf43Q8WVR3 580 aa21.07■□□□□ 0.96
HDLBP-238ENST00000479894 ST5P78524 1137 aa21.06■□□□□ 0.96
HDLBP-238ENST00000479894 BEGAINQ9BUH8 593 aa21.06■□□□□ 0.96
HDLBP-238ENST00000479894 ABT1Q9ULW3 272 aaKnown RBP21.06■□□□□ 0.96
HDLBP-238ENST00000479894 IL13P35225 146 aa21.05■□□□□ 0.96
HDLBP-238ENST00000479894 FKBP4Q02790 459 aaKnown RBP eCLIP21.05■□□□□ 0.96
HDLBP-238ENST00000479894 CCDC24Q8N4L8 307 aa21.05■□□□□ 0.96
HDLBP-238ENST00000479894 SETDB2Q96T68 719 aa21.05■□□□□ 0.96
HDLBP-238ENST00000479894 ZNF541Q9H0D2 1346 aa21.04■□□□□ 0.96
HDLBP-238ENST00000479894 IL6STP40189 918 aaPredicted RBP21.04■□□□□ 0.96
HDLBP-238ENST00000479894 ECE1P42892 770 aa21.04■□□□□ 0.96
HDLBP-238ENST00000479894 MAP1SQ66K74 1059 aaPredicted RBP21.04■□□□□ 0.96
HDLBP-238ENST00000479894 TEX13AQ9BXU3 409 aaPredicted RBP21.04■□□□□ 0.96
HDLBP-238ENST00000479894 NPHP1O15259 732 aa21.03■□□□□ 0.96
HDLBP-238ENST00000479894 DDX21Q9NR30 783 aaKnown RBP eCLIP21.03■□□□□ 0.96
HDLBP-238ENST00000479894 TTC5Q8N0Z6 440 aa21.02■□□□□ 0.96
HDLBP-238ENST00000479894 TBC1D2BQ9UPU7 963 aa21.02■□□□□ 0.96
HDLBP-238ENST00000479894 CASP8AP2Q9UKL3 1982 aa21.02■□□□□ 0.96
HDLBP-238ENST00000479894 FZD9O00144 591 aa21.01■□□□□ 0.95
HDLBP-238ENST00000479894 GPC2Q8N158 579 aa21.01■□□□□ 0.95
HDLBP-238ENST00000479894 CAPNS2Q96L46 248 aa21.01■□□□□ 0.95
HDLBP-238ENST00000479894 TNRC18O15417 2968 aaPredicted RBP21.01■□□□□ 0.95
HDLBP-238ENST00000479894 RNF123Q5XPI4 1314 aa21.01■□□□□ 0.95
HDLBP-238ENST00000479894 SIPA1L3O60292 1781 aaPredicted RBP21■□□□□ 0.95
HDLBP-238ENST00000479894 RTKN2Q8IZC4 609 aa21■□□□□ 0.95
HDLBP-238ENST00000479894 ZNF277Q9NRM2 450 aaPredicted RBP21■□□□□ 0.95
HDLBP-238ENST00000479894 HEG1Q9ULI3 1381 aa20.99■□□□□ 0.95
HDLBP-238ENST00000479894 LTBP1Q14766 1721 aa20.99■□□□□ 0.95
HDLBP-238ENST00000479894 CAMTA2O94983 1202 aa20.99■□□□□ 0.95
HDLBP-238ENST00000479894 NPR1P16066 1061 aa20.99■□□□□ 0.95
HDLBP-238ENST00000479894 NPM2Q86SE8 214 aaKnown RBP20.99■□□□□ 0.95
HDLBP-238ENST00000479894 MORC1Q86VD1 984 aa20.99■□□□□ 0.95
HDLBP-238ENST00000479894 GPR101Q96P66 508 aaPredicted RBP20.99■□□□□ 0.95
HDLBP-238ENST00000479894 KLRG2A4D1S0 409 aaPredicted RBP20.98■□□□□ 0.95
HDLBP-238ENST00000479894 MAP2K2P36507 400 aa20.98■□□□□ 0.95
HDLBP-238ENST00000479894 CA12O43570 354 aa20.97■□□□□ 0.95
HDLBP-238ENST00000479894 IARSP41252 1262 aaKnown RBP20.97■□□□□ 0.95
HDLBP-238ENST00000479894 ZNF496Q96IT1 587 aaPredicted RBP20.97■□□□□ 0.95
HDLBP-238ENST00000479894 ZNF330Q9Y3S2 320 aaPredicted RBP20.97■□□□□ 0.95
HDLBP-238ENST00000479894 MTHFSDQ2M296 383 aaKnown RBP20.95■□□□□ 0.94
HDLBP-238ENST00000479894 CYP4F22Q6NT55 531 aa20.95■□□□□ 0.94
HDLBP-238ENST00000479894 ZNF790Q6PG37 636 aa20.95■□□□□ 0.94
HDLBP-238ENST00000479894 CLEC4GQ6UXB4 293 aa20.95■□□□□ 0.94
HDLBP-238ENST00000479894 PAXIP1Q6ZW49 1069 aaPredicted RBP20.95■□□□□ 0.94
HDLBP-238ENST00000479894 MCOLN1Q9GZU1 580 aa20.95■□□□□ 0.94
HDLBP-238ENST00000479894 PANK3Q9H999 370 aa20.95■□□□□ 0.94
HDLBP-238ENST00000479894 POLR3GLQ9BT43 218 aa20.94■□□□□ 0.94
HDLBP-238ENST00000479894 TLL2Q9Y6L7 1015 aa20.94■□□□□ 0.94
HDLBP-238ENST00000479894 LMOD1P29536 600 aaPredicted RBP20.93■□□□□ 0.94
HDLBP-238ENST00000479894 NBPF5PQ86XG9 351 aaPredicted RBP20.93■□□□□ 0.94
HDLBP-238ENST00000479894 DZIP3Q86Y13 1208 aaKnown RBP20.93■□□□□ 0.94
HDLBP-238ENST00000479894 SYNE4Q8N205 404 aa20.93■□□□□ 0.94
HDLBP-238ENST00000479894 JDP2Q8WYK2 163 aa20.93■□□□□ 0.94
HDLBP-238ENST00000479894 ALDH1B1P30837 517 aa20.92■□□□□ 0.94
HDLBP-238ENST00000479894 PSMD1Q99460 953 aa20.92■□□□□ 0.94
HDLBP-238ENST00000479894 SNED1Q8TER0 1413 aa20.92■□□□□ 0.94
HDLBP-238ENST00000479894 RGL2O15211 777 aa20.91■□□□□ 0.94
HDLBP-238ENST00000479894 HMOX1P09601 288 aa20.91■□□□□ 0.94
HDLBP-238ENST00000479894 EIF6P56537 245 aaKnown RBP20.91■□□□□ 0.94
HDLBP-238ENST00000479894 CST9Q5W186 159 aa20.91■□□□□ 0.94
HDLBP-238ENST00000479894 CFAP44Q96MT7 982 aa20.91■□□□□ 0.94
HDLBP-238ENST00000479894 FMNL2Q96PY5 1086 aa20.91■□□□□ 0.94
HDLBP-238ENST00000479894 KIF7Q2M1P5 1343 aa20.9■□□□□ 0.94
HDLBP-238ENST00000479894 A1BGP04217 495 aa20.9■□□□□ 0.94
HDLBP-238ENST00000479894 TEFQ10587 303 aa20.9■□□□□ 0.94
HDLBP-238ENST00000479894 TPTE2Q6XPS3 522 aa20.9■□□□□ 0.94
HDLBP-238ENST00000479894 USP50Q70EL3 339 aaPredicted RBP20.9■□□□□ 0.94
HDLBP-238ENST00000479894 HHIPL1Q96JK4 782 aa20.9■□□□□ 0.94
HDLBP-238ENST00000479894 ZNF652Q9Y2D9 606 aa20.9■□□□□ 0.94
HDLBP-238ENST00000479894 GRM1Q13255 1194 aa20.89■□□□□ 0.93
HDLBP-238ENST00000479894 OLFM4Q6UX06 510 aa20.89■□□□□ 0.93
HDLBP-238ENST00000479894 TSKSQ9UJT2 592 aa20.89■□□□□ 0.93
HDLBP-238ENST00000479894 SCNN1DP51172 638 aa20.88■□□□□ 0.93
HDLBP-238ENST00000479894 BRPF1P55201 1214 aaPredicted RBP20.88■□□□□ 0.93
HDLBP-238ENST00000479894 CC2D2BQ6DHV5 1058 aa20.88■□□□□ 0.93
HDLBP-238ENST00000479894 ZNF316A6NFI3 1004 aaPredicted RBP20.87■□□□□ 0.93
HDLBP-238ENST00000479894 AOC2O75106 756 aa20.87■□□□□ 0.93
HDLBP-238ENST00000479894 FMR1Q06787 632 aaKnown RBP eCLIP20.87■□□□□ 0.932e-7■□□□□ 11.3
HDLBP-238ENST00000479894 GJA3Q9Y6H8 435 aa20.87■□□□□ 0.93
HDLBP-238ENST00000479894 EPS15P42566 896 aa20.86■□□□□ 0.93
HDLBP-238ENST00000479894 GRIPAP1Q4V328 841 aa20.86■□□□□ 0.93
HDLBP-238ENST00000479894 SAPCD2Q86UD0 394 aa20.86■□□□□ 0.93
HDLBP-238ENST00000479894 COL4A5P29400 1685 aa20.86■□□□□ 0.93
HDLBP-238ENST00000479894 DGKZQ13574 1117 aa20.85■□□□□ 0.93
HDLBP-238ENST00000479894 IL17REQ8NFR9 667 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms