RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 NSRP1Q9H0G5 558 aaKnown RBP12.62□□□□□ -0.39
EWSR1-216ENST00000479135 VPS18Q9P253 973 aa12.62□□□□□ -0.39
EWSR1-216ENST00000479135 ANKS4BQ8N8V4 417 aa12.62□□□□□ -0.39
EWSR1-216ENST00000479135 KIF18AQ8NI77 898 aa12.62□□□□□ -0.39
EWSR1-216ENST00000479135 ARHGEF2Q92974 986 aaKnown RBP12.62□□□□□ -0.39
EWSR1-216ENST00000479135 HSP90AA4PQ58FG1 418 aa12.61□□□□□ -0.39
EWSR1-216ENST00000479135 CFDP1Q9UEE9 299 aaPredicted RBP12.61□□□□□ -0.39
EWSR1-216ENST00000479135 PPFIA2O75334 1257 aa12.61□□□□□ -0.39
EWSR1-216ENST00000479135 FGFR1OPO95684 399 aaKnown RBP12.61□□□□□ -0.39
EWSR1-216ENST00000479135 ACRBPQ8NEB7 543 aa12.61□□□□□ -0.39
EWSR1-216ENST00000479135 FLCNQ8NFG4 579 aa12.61□□□□□ -0.39
EWSR1-216ENST00000479135 GRM1Q13255 1194 aa12.61□□□□□ -0.39
EWSR1-216ENST00000479135 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
EWSR1-216ENST00000479135 CCDC125Q86Z20 511 aa12.61□□□□□ -0.39
EWSR1-216ENST00000479135 TLDC2A0PJX2 215 aa12.61□□□□□ -0.39
EWSR1-216ENST00000479135 PPP1R21Q6ZMI0 780 aa12.61□□□□□ -0.39
EWSR1-216ENST00000479135 CCDC82Q8N4S0 544 aa12.61□□□□□ -0.39
EWSR1-216ENST00000479135 VPS52Q8N1B4 723 aa12.6□□□□□ -0.39
EWSR1-216ENST00000479135 WDR46O15213 610 aaKnown RBP12.6□□□□□ -0.39
EWSR1-216ENST00000479135 PFDN1O60925 122 aa12.6□□□□□ -0.39
EWSR1-216ENST00000479135 ZNF131P52739 623 aa12.6□□□□□ -0.39
EWSR1-216ENST00000479135 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
EWSR1-216ENST00000479135 LRCH2Q5VUJ6 765 aa12.6□□□□□ -0.39
EWSR1-216ENST00000479135 NUP62CLQ9H1M0 184 aa12.6□□□□□ -0.39
EWSR1-216ENST00000479135 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
EWSR1-216ENST00000479135 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
EWSR1-216ENST00000479135 CAPZA3Q96KX2 299 aa12.6□□□□□ -0.39
EWSR1-216ENST00000479135 MPHOSPH6Q99547 160 aaKnown RBP12.6□□□□□ -0.39
EWSR1-216ENST00000479135 ROCK2O75116 1388 aaKnown RBP12.6□□□□□ -0.39
EWSR1-216ENST00000479135 TOP1P11387 765 aaKnown RBP12.6□□□□□ -0.39
EWSR1-216ENST00000479135 ACTN2P35609 894 aa12.6□□□□□ -0.39
EWSR1-216ENST00000479135 CARMIL1Q5VZK9 1371 aa12.6□□□□□ -0.39
EWSR1-216ENST00000479135 LUC7L2Q9Y383 392 aaKnown RBP12.6□□□□□ -0.39
EWSR1-216ENST00000479135 WIZO95785 1651 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 KIF7Q2M1P5 1343 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
EWSR1-216ENST00000479135 PPP4R3AQ6IN85 833 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 FNBP4Q8N3X1 1017 aaPredicted RBP12.59□□□□□ -0.39
EWSR1-216ENST00000479135 RBBP5Q15291 538 aaKnown RBP12.59□□□□□ -0.39
EWSR1-216ENST00000479135 CCDC122Q5T0U0 273 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 CLIP2Q9UDT6 1046 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 CAPN2P17655 700 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 KIAA0753Q2KHM9 967 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 LRSAM1Q6UWE0 723 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 CPLX4Q7Z7G2 160 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 PSPC1Q8WXF1 523 aaKnown RBP12.59□□□□□ -0.39
EWSR1-216ENST00000479135 ZNF830Q96NB3 372 aaPredicted RBP12.59□□□□□ -0.39
EWSR1-216ENST00000479135 ESPNB1AK53 854 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 BIN1O00499 593 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 ATP11AP98196 1134 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 TMED1Q13445 227 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 NEDD9Q14511 834 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 CCDC57Q2TAC2 916 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 VCX3BQ9H321 246 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 MCM3P25205 808 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 UBAC1Q9BSL1 405 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 TRIM7Q9C029 511 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 CNNM1Q9NRU3 951 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 FCHSD2O94868 740 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 SLMAPQ14BN4 828 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 CCDC50Q8IVM0 306 aa12.59□□□□□ -0.39
EWSR1-216ENST00000479135 UTP14CQ5TAP6 766 aaKnown RBP12.58□□□□□ -0.4
EWSR1-216ENST00000479135 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
EWSR1-216ENST00000479135 CDR2Q01850 454 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 ANKRD35Q8N283 1001 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
EWSR1-216ENST00000479135 TSG101Q99816 390 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 ZBBXA8MT70 800 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 HIP1RO75146 1068 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 ANKRD24Q8TF21 1146 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 EXOC1Q9NV70 894 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 AFG3L2Q9Y4W6 797 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 OPHN1O60890 802 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 NOL7Q9UMY1 257 aaKnown RBP12.58□□□□□ -0.4
EWSR1-216ENST00000479135 MBD3O95983 291 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 SFPQP23246 707 aaKnown RBP eCLIP12.58□□□□□ -0.4
EWSR1-216ENST00000479135 PMS1P54277 932 aaKnown RBP12.58□□□□□ -0.4
EWSR1-216ENST00000479135 TMC6Q7Z403 805 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 PANK1Q8TE04 598 aa12.58□□□□□ -0.4
EWSR1-216ENST00000479135 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.57□□□□□ -0.4
EWSR1-216ENST00000479135 RRP1P56182 461 aaKnown RBP12.57□□□□□ -0.4
EWSR1-216ENST00000479135 PPANQ9NQ55 473 aaKnown RBP12.57□□□□□ -0.4
EWSR1-216ENST00000479135 SMTNL1A8MU46 457 aa12.57□□□□□ -0.4
EWSR1-216ENST00000479135 PPFIA3O75145 1194 aa12.57□□□□□ -0.4
EWSR1-216ENST00000479135 SDCCAG8Q86SQ7 713 aaPredicted RBP12.57□□□□□ -0.4
EWSR1-216ENST00000479135 JMYQ8N9B5 988 aa12.57□□□□□ -0.4
EWSR1-216ENST00000479135 GCKP35557 465 aa12.57□□□□□ -0.4
EWSR1-216ENST00000479135 TSC22D1Q15714 1073 aa12.57□□□□□ -0.4
EWSR1-216ENST00000479135 KRBA2Q6ZNG9 492 aa12.57□□□□□ -0.4
EWSR1-216ENST00000479135 EEF2P13639 858 aaKnown RBP12.57□□□□□ -0.4
EWSR1-216ENST00000479135 FKBP4Q02790 459 aaKnown RBP eCLIP12.57□□□□□ -0.4
EWSR1-216ENST00000479135 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
EWSR1-216ENST00000479135 CCDC12Q8WUD4 166 aaPredicted RBP12.57□□□□□ -0.4
EWSR1-216ENST00000479135 IFT81Q8WYA0 676 aa12.57□□□□□ -0.4
EWSR1-216ENST00000479135 STK38LQ9Y2H1 464 aa12.57□□□□□ -0.4
EWSR1-216ENST00000479135 ZSCAN12O43309 604 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 PTGS1P23219 599 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 ARID5AQ03989 594 aa12.56□□□□□ -0.4
EWSR1-216ENST00000479135 ZNF280CQ8ND82 737 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms