RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 NIP7Q9Y221 180 aaKnown RBP eCLIP21.93■■□□□ 1.1
PHF1-207ENST00000479029 C21orf2O43822 256 aa21.92■■□□□ 1.1
PHF1-207ENST00000479029 SRGNP10124 158 aa21.92■■□□□ 1.1
PHF1-207ENST00000479029 STYK1Q6J9G0 422 aa21.92■■□□□ 1.1
PHF1-207ENST00000479029 ZNF219Q9P2Y4 722 aaPredicted RBP21.92■■□□□ 1.1
PHF1-207ENST00000479029 NFKBIEO00221 500 aa21.91■■□□□ 1.1
PHF1-207ENST00000479029 RIPK4P57078 832 aa21.91■■□□□ 1.1
PHF1-207ENST00000479029 RBM46Q8TBY0 533 aaKnown RBP21.91■■□□□ 1.1
PHF1-207ENST00000479029 MASTLQ96GX5 879 aa21.91■■□□□ 1.1
PHF1-207ENST00000479029 RRAGCQ9HB90 399 aa21.91■■□□□ 1.1
PHF1-207ENST00000479029 DLEC1Q9Y238 1755 aa21.91■■□□□ 1.1
PHF1-207ENST00000479029 PRELPP51888 382 aa21.9■■□□□ 1.1
PHF1-207ENST00000479029 NGEFQ8N5V2 710 aa21.9■■□□□ 1.1
PHF1-207ENST00000479029 RRP7AQ9Y3A4 280 aaKnown RBP21.9■■□□□ 1.1
PHF1-207ENST00000479029 MYBBP1AQ9BQG0 1328 aaKnown RBP21.89■■□□□ 1.1
PHF1-207ENST00000479029 HLFQ16534 295 aa21.89■■□□□ 1.09
PHF1-207ENST00000479029 SBF1O95248 1867 aa21.89■■□□□ 1.09
PHF1-207ENST00000479029 ANKRD31Q8N7Z5 1873 aa21.88■■□□□ 1.09
PHF1-207ENST00000479029 APLP1P51693 650 aa21.88■■□□□ 1.09
PHF1-207ENST00000479029 PRPF40BQ6NWY9 871 aaKnown RBP21.88■■□□□ 1.09
PHF1-207ENST00000479029 TSPYL4Q9UJ04 414 aa21.88■■□□□ 1.09
PHF1-207ENST00000479029 BCORQ6W2J9 1755 aa21.87■■□□□ 1.09
PHF1-207ENST00000479029 DLG5Q8TDM6 1919 aa21.87■■□□□ 1.09
PHF1-207ENST00000479029 GLTPD2A6NH11 291 aa21.87■■□□□ 1.09
PHF1-207ENST00000479029 FAM177BA6PVY3 158 aa21.87■■□□□ 1.09
PHF1-207ENST00000479029 ERVV-1B6SEH8 477 aa21.87■■□□□ 1.09
PHF1-207ENST00000479029 GTF2E1P29083 439 aaPredicted RBP21.87■■□□□ 1.09
PHF1-207ENST00000479029 LMOD3Q0VAK6 560 aa21.87■■□□□ 1.09
PHF1-207ENST00000479029 SOGA3Q5TF21 947 aa21.87■■□□□ 1.09
PHF1-207ENST00000479029 KIF6Q6ZMV9 814 aa21.87■■□□□ 1.09
PHF1-207ENST00000479029 KLRG2A4D1S0 409 aaPredicted RBP21.86■■□□□ 1.09
PHF1-207ENST00000479029 MYL6BP14649 208 aa21.86■■□□□ 1.09
PHF1-207ENST00000479029 NPR1P16066 1061 aa21.86■■□□□ 1.09
PHF1-207ENST00000479029 TMPOP42166 694 aaKnown RBP21.86■■□□□ 1.09
PHF1-207ENST00000479029 TAOK3Q9H2K8 898 aa21.86■■□□□ 1.09
PHF1-207ENST00000479029 FSTL1Q12841 308 aa21.85■■□□□ 1.09
PHF1-207ENST00000479029 DPY19L2Q6NUT2 758 aa21.85■■□□□ 1.09
PHF1-207ENST00000479029 BABAM1Q9NWV8 329 aa21.85■■□□□ 1.09
PHF1-207ENST00000479029 MAP3K15Q6ZN16 1313 aa21.84■■□□□ 1.09
PHF1-207ENST00000479029 VEGFAP15692 232 aaPredicted RBP21.84■■□□□ 1.09
PHF1-207ENST00000479029 ERFEQ4G0M1 354 aa21.84■■□□□ 1.09
PHF1-207ENST00000479029 TTLL7Q6ZT98 887 aa21.84■■□□□ 1.09
PHF1-207ENST00000479029 NYXQ9GZU5 481 aa21.84■■□□□ 1.09
PHF1-207ENST00000479029 KDM3BQ7LBC6 1761 aa21.84■■□□□ 1.09
PHF1-207ENST00000479029 ERBB4Q15303 1308 aa21.83■■□□□ 1.09
PHF1-207ENST00000479029 LTBP3Q9NS15 1303 aa21.83■■□□□ 1.09
PHF1-207ENST00000479029 WDR43Q15061 677 aaKnown RBP eCLIP21.83■■□□□ 1.09
PHF1-207ENST00000479029 CCDC146Q8IYE0 955 aa21.82■■□□□ 1.08
PHF1-207ENST00000479029 C7orf43Q8WVR3 580 aa21.82■■□□□ 1.08
PHF1-207ENST00000479029 COL11A2P13942 1736 aaPredicted RBP21.82■■□□□ 1.08
PHF1-207ENST00000479029 EIF2S2P20042 333 aaKnown RBP21.81■■□□□ 1.08
PHF1-207ENST00000479029 NEUROD2Q15784 382 aa21.81■■□□□ 1.08
PHF1-207ENST00000479029 ZBTB3Q9H5J0 574 aa21.81■■□□□ 1.08
PHF1-207ENST00000479029 LAMB4A4D0S4 1761 aa21.81■■□□□ 1.08
PHF1-207ENST00000479029 ALDH1B1P30837 517 aa21.8■■□□□ 1.08
PHF1-207ENST00000479029 CCDC93Q567U6 631 aa21.8■■□□□ 1.08
PHF1-207ENST00000479029 SMC1BQ8NDV3 1235 aa21.8■■□□□ 1.08
PHF1-207ENST00000479029 RUNDC1Q96C34 613 aa21.8■■□□□ 1.08
PHF1-207ENST00000479029 SLX4Q8IY92 1834 aa21.79■■□□□ 1.08
PHF1-207ENST00000479029 GPTP24298 496 aa21.79■■□□□ 1.08
PHF1-207ENST00000479029 NUTM1Q86Y26 1132 aa21.78■■□□□ 1.08
PHF1-207ENST00000479029 TNRC6CQ9HCJ0 1690 aaKnown RBP21.78■■□□□ 1.08
PHF1-207ENST00000479029 PDIA6Q15084 440 aa21.77■■□□□ 1.08
PHF1-207ENST00000479029 GIGYF2Q6Y7W6 1299 aaKnown RBP21.77■■□□□ 1.08
PHF1-207ENST00000479029 ZNF34Q8IZ26 560 aa21.77■■□□□ 1.08
PHF1-207ENST00000479029 RTKN2Q8IZC4 609 aa21.77■■□□□ 1.08
PHF1-207ENST00000479029 ADAMTS8Q9UP79 889 aa21.77■■□□□ 1.08
PHF1-207ENST00000479029 FER1L6Q2WGJ9 1857 aa21.76■■□□□ 1.07
PHF1-207ENST00000479029 CRY2Q49AN0 593 aa21.76■■□□□ 1.07
PHF1-207ENST00000479029 DNAJC5GQ8N7S2 189 aa21.76■■□□□ 1.07
PHF1-207ENST00000479029 CCDC88AQ3V6T2 1871 aa21.75■■□□□ 1.07
PHF1-207ENST00000479029 CHL1O00533 1208 aa21.75■■□□□ 1.07
PHF1-207ENST00000479029 FKBP4Q02790 459 aaKnown RBP eCLIP21.75■■□□□ 1.07
PHF1-207ENST00000479029 SUSD4Q5VX71 490 aa21.75■■□□□ 1.07
PHF1-207ENST00000479029 LRP10Q7Z4F1 713 aa21.75■■□□□ 1.07
PHF1-207ENST00000479029 PRKRIP1Q9H875 184 aaPredicted RBP21.75■■□□□ 1.07
PHF1-207ENST00000479029 UBN2Q6ZU65 1347 aa21.75■■□□□ 1.07
PHF1-207ENST00000479029 IBTKQ9P2D0 1353 aaPredicted RBP21.74■■□□□ 1.07
PHF1-207ENST00000479029 POTECB2RU33 542 aa21.74■■□□□ 1.07
PHF1-207ENST00000479029 PARP10Q53GL7 1025 aa21.74■■□□□ 1.07
PHF1-207ENST00000479029 PPP1R42Q7Z4L9 355 aa21.74■■□□□ 1.07
PHF1-207ENST00000479029 RPGRQ92834 1020 aaKnown RBP21.74■■□□□ 1.07
PHF1-207ENST00000479029 TRIM35Q9UPQ4 493 aa21.74■■□□□ 1.07
PHF1-207ENST00000479029 LAS1LQ9Y4W2 734 aaKnown RBP21.74■■□□□ 1.07
PHF1-207ENST00000479029 ABCC12Q96J65 1359 aa21.74■■□□□ 1.07
PHF1-207ENST00000479029 PROSER3Q2NL68 480 aa21.73■■□□□ 1.07
PHF1-207ENST00000479029 OLFM4Q6UX06 510 aa21.73■■□□□ 1.07
PHF1-207ENST00000479029 NECTIN2Q92692 538 aa21.73■■□□□ 1.07
PHF1-207ENST00000479029 TIAM2Q8IVF5 1701 aa21.72■■□□□ 1.07
PHF1-207ENST00000479029 DDNO94850 711 aaPredicted RBP21.72■■□□□ 1.07
PHF1-207ENST00000479029 ANXA1P04083 346 aa21.72■■□□□ 1.07
PHF1-207ENST00000479029 ZNF277Q9NRM2 450 aaPredicted RBP21.72■■□□□ 1.07
PHF1-207ENST00000479029 NUP98P52948 1817 aa21.71■■□□□ 1.07
PHF1-207ENST00000479029 NTSR2O95665 410 aa21.71■■□□□ 1.07
PHF1-207ENST00000479029 HOXA10P31260 410 aaPredicted RBP21.71■■□□□ 1.07
PHF1-207ENST00000479029 CC2D2BQ6DHV5 1058 aa21.71■■□□□ 1.07
PHF1-207ENST00000479029 COPS6Q7L5N1 327 aa21.71■■□□□ 1.07
PHF1-207ENST00000479029 ARFGEF2Q9Y6D5 1785 aa21.71■■□□□ 1.07
PHF1-207ENST00000479029 HTRA3P83110 453 aa21.7■■□□□ 1.06
PHF1-207ENST00000479029 AIMP1Q12904 312 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms