RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 LRP10Q7Z4F1 713 aa34.58■■■■□ 3.13
CCM2-211ENST00000478582 NECTIN2Q92692 538 aa34.58■■■■□ 3.13
CCM2-211ENST00000478582 DDX21Q9NR30 783 aaKnown RBP eCLIP34.58■■■■□ 3.13
CCM2-211ENST00000478582 EXOSC9Q06265 439 aaKnown RBP34.57■■■■□ 3.12
CCM2-211ENST00000478582 TRMT2AQ8IZ69 625 aaKnown RBP34.57■■■■□ 3.12
CCM2-211ENST00000478582 MYL6BP14649 208 aa34.56■■■■□ 3.12
CCM2-211ENST00000478582 NFIXQ14938 502 aa34.56■■■■□ 3.12
CCM2-211ENST00000478582 DZIP3Q86Y13 1208 aaKnown RBP34.56■■■■□ 3.12
CCM2-211ENST00000478582 CDCA7LQ96GN5 454 aa34.56■■■■□ 3.12
CCM2-211ENST00000478582 DBF4Q9UBU7 674 aaPredicted RBP34.56■■■■□ 3.12
CCM2-211ENST00000478582 TBC1D2BQ9UPU7 963 aa34.56■■■■□ 3.12
CCM2-211ENST00000478582 PXDNLA1KZ92 1463 aa34.56■■■■□ 3.12
CCM2-211ENST00000478582 PROSER3Q2NL68 480 aa34.54■■■■□ 3.12
CCM2-211ENST00000478582 CHPF2Q9P2E5 772 aa34.54■■■■□ 3.12
CCM2-211ENST00000478582 KIAA1551Q9HCM1 1747 aa34.54■■■■□ 3.12
CCM2-211ENST00000478582 A0A0G2JLW4 131 aa34.53■■■■□ 3.12
CCM2-211ENST00000478582 RGL2O15211 777 aa34.53■■■■□ 3.12
CCM2-211ENST00000478582 VAMP4O75379 141 aa34.53■■■■□ 3.12
CCM2-211ENST00000478582 CAMTA2O94983 1202 aa34.53■■■■□ 3.12
CCM2-211ENST00000478582 CCDC30Q5VVM6 783 aa34.53■■■■□ 3.12
CCM2-211ENST00000478582 WWC3Q9ULE0 1092 aa34.53■■■■□ 3.12
CCM2-211ENST00000478582 N4BP2Q86UW6 1770 aaPredicted RBP34.52■■■■□ 3.12
CCM2-211ENST00000478582 GOLGB1Q14789 3259 aaKnown RBP34.52■■■■□ 3.12
CCM2-211ENST00000478582 ZBED9Q6R2W3 1325 aa34.51■■■■□ 3.11
CCM2-211ENST00000478582 ANXA1P04083 346 aa34.5■■■■□ 3.11
CCM2-211ENST00000478582 DPEP1P16444 411 aa34.5■■■■□ 3.11
CCM2-211ENST00000478582 HYPKQ9NX55 129 aa34.49■■■■□ 3.11
CCM2-211ENST00000478582 SCN7AQ01118 1682 aa34.48■■■■□ 3.11
CCM2-211ENST00000478582 SERPINB2P05120 415 aa34.48■■■■□ 3.11
CCM2-211ENST00000478582 CLEC4GQ6UXB4 293 aa34.48■■■■□ 3.11
CCM2-211ENST00000478582 AFDNP55196 1824 aaKnown RBP34.47■■■■□ 3.11
CCM2-211ENST00000478582 ERVV-1B6SEH8 477 aa34.47■■■■□ 3.11
CCM2-211ENST00000478582 TTLL7Q6ZT98 887 aa34.47■■■■□ 3.11
CCM2-211ENST00000478582 TBC1D9BQ66K14 1250 aa34.46■■■■□ 3.11
CCM2-211ENST00000478582 BICDL1Q6ZP65 573 aa34.46■■■■□ 3.11
CCM2-211ENST00000478582 NRXN2Q9P2S2 1712 aa34.46■■■■□ 3.11
CCM2-211ENST00000478582 BCORQ6W2J9 1755 aa34.46■■■■□ 3.11
CCM2-211ENST00000478582 KCNA3P22001 575 aa34.45■■■■□ 3.11
CCM2-211ENST00000478582 KIF6Q6ZMV9 814 aa34.45■■■■□ 3.11
CCM2-211ENST00000478582 COPS6Q7L5N1 327 aa34.45■■■■□ 3.11
CCM2-211ENST00000478582 MAP3K15Q6ZN16 1313 aa34.45■■■■□ 3.11
CCM2-211ENST00000478582 ZNF784Q8NCA9 323 aaPredicted RBP34.44■■■■□ 3.1
CCM2-211ENST00000478582 XAGE3Q8WTP9 111 aa34.44■■■■□ 3.1
CCM2-211ENST00000478582 ZNF652Q9Y2D9 606 aa34.44■■■■□ 3.1
CCM2-211ENST00000478582 STK31Q9BXU1 1019 aa34.43■■■■□ 3.1
CCM2-211ENST00000478582 BCS1LQ9Y276 419 aa34.42■■■■□ 3.1
CCM2-211ENST00000478582 PIM2Q9P1W9 311 aa34.41■■■■□ 3.1
CCM2-211ENST00000478582 BRCA1P38398 1863 aaKnown RBP34.4■■■■□ 3.1
CCM2-211ENST00000478582 HLFQ16534 295 aa34.4■■■■□ 3.1
CCM2-211ENST00000478582 AIMP1Q12904 312 aaKnown RBP34.39■■■■□ 3.1
CCM2-211ENST00000478582 CHRNA5P30532 468 aa34.38■■■■□ 3.09
CCM2-211ENST00000478582 SETDB2Q96T68 719 aa34.38■■■■□ 3.09
CCM2-211ENST00000478582 ZBTB3Q9H5J0 574 aa34.38■■■■□ 3.09
CCM2-211ENST00000478582 PHAXQ9H814 394 aaKnown RBP34.38■■■■□ 3.09
CCM2-211ENST00000478582 SLC4A2P04920 1241 aa34.37■■■■□ 3.09
CCM2-211ENST00000478582 CT47B1P0C2W7 299 aaPredicted RBP34.37■■■■□ 3.09
CCM2-211ENST00000478582 GIGYF2Q6Y7W6 1299 aaKnown RBP34.37■■■■□ 3.09
CCM2-211ENST00000478582 ZNF428Q96B54 188 aa34.37■■■■□ 3.09
CCM2-211ENST00000478582 CARMIL3Q8ND23 1372 aa34.36■■■■□ 3.09
CCM2-211ENST00000478582 TCERG1O14776 1098 aaKnown RBP34.36■■■■□ 3.09
CCM2-211ENST00000478582 ANKRD13DQ6ZTN6 518 aa34.35■■■■□ 3.09
CCM2-211ENST00000478582 PLBD2Q8NHP8 589 aa34.35■■■■□ 3.09
CCM2-211ENST00000478582 ATP10DQ9P241 1426 aa34.33■■■■□ 3.09
CCM2-211ENST00000478582 DALRD3Q5D0E6 543 aaKnown RBP34.33■■■■□ 3.09
CCM2-211ENST00000478582 PRR5LQ6MZQ0 368 aa34.32■■■■□ 3.08
CCM2-211ENST00000478582 NIP7Q9Y221 180 aaKnown RBP eCLIP34.31■■■■□ 3.08
CCM2-211ENST00000478582 NUP98P52948 1817 aa34.31■■■■□ 3.08
CCM2-211ENST00000478582 ARFGEF1Q9Y6D6 1849 aa34.3■■■■□ 3.08
CCM2-211ENST00000478582 ZNF34Q8IZ26 560 aa34.3■■■■□ 3.08
CCM2-211ENST00000478582 CACNA1FO60840 1977 aa34.3■■■■□ 3.08
CCM2-211ENST00000478582 DDX58O95786 925 aaKnown RBP34.29■■■■□ 3.08
CCM2-211ENST00000478582 HSP90AB3PQ58FF7 597 aa34.29■■■■□ 3.08
CCM2-211ENST00000478582 ARHGAP27Q6ZUM4 889 aa34.29■■■■□ 3.08
CCM2-211ENST00000478582 G2E3Q7L622 706 aa34.29■■■■□ 3.08
CCM2-211ENST00000478582 BRIP1Q9BX63 1249 aa34.29■■■■□ 3.08
CCM2-211ENST00000478582 C2CD5Q86YS7 1000 aa34.28■■■■□ 3.08
CCM2-211ENST00000478582 H0YIN7 160 aa34.27■■■■□ 3.08
CCM2-211ENST00000478582 FLIIQ13045 1269 aa34.27■■■■□ 3.08
CCM2-211ENST00000478582 TCIRG1Q13488 830 aa34.27■■■■□ 3.08
CCM2-211ENST00000478582 ALDH1L2Q3SY69 923 aa34.27■■■■□ 3.08
CCM2-211ENST00000478582 CNBD1Q8NA66 436 aa34.27■■■■□ 3.08
CCM2-211ENST00000478582 PDZRN3Q9UPQ7 1066 aa34.27■■■■□ 3.08
CCM2-211ENST00000478582 PDE6BP35913 854 aa34.26■■■■□ 3.08
CCM2-211ENST00000478582 RIC3Q7Z5B4 369 aa34.26■■■■□ 3.08
CCM2-211ENST00000478582 NPHP1O15259 732 aa34.25■■■■□ 3.07
CCM2-211ENST00000478582 KSR2Q6VAB6 950 aa34.25■■■■□ 3.07
CCM2-211ENST00000478582 CCDC24Q8N4L8 307 aa34.25■■■■□ 3.07
CCM2-211ENST00000478582 ANKRD31Q8N7Z5 1873 aa34.24■■■■□ 3.07
CCM2-211ENST00000478582 DLEC1Q9Y238 1755 aa34.23■■■■□ 3.07
CCM2-211ENST00000478582 ST5P78524 1137 aa34.23■■■■□ 3.07
CCM2-211ENST00000478582 PARP10Q53GL7 1025 aa34.23■■■■□ 3.07
CCM2-211ENST00000478582 NBPF5PQ86XG9 351 aaPredicted RBP34.23■■■■□ 3.07
CCM2-211ENST00000478582 MRPL50Q8N5N7 158 aaKnown RBP34.23■■■■□ 3.07
CCM2-211ENST00000478582 SSH1Q8WYL5 1049 aa34.23■■■■□ 3.07
CCM2-211ENST00000478582 ADCY9O60503 1353 aa34.23■■■■□ 3.07
CCM2-211ENST00000478582 GPTP24298 496 aa34.22■■■■□ 3.07
CCM2-211ENST00000478582 TTLL6Q8N841 843 aa34.22■■■■□ 3.07
CCM2-211ENST00000478582 UBN2Q6ZU65 1347 aa34.22■■■■□ 3.07
CCM2-211ENST00000478582 PI4KAP2A4QPH2 592 aa34.21■■■■□ 3.07
CCM2-211ENST00000478582 PI4KAP1Q8N8J0 262 aa34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms