RNA–Protein interactions for RNA: ENST00000478424.5

ARF1-209, Transcript of ADP ribosylation factor 1, human

TSL 2

Gene ARF1, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF1-209	ENST00000478424	FAM177B	A6PVY3	158 aa		32.86	■■■□□ 2.85
ARF1-209	ENST00000478424	PNN	Q9H307	717 aa	Known RBP	32.86	■■■□□ 2.85
ARF1-209	ENST00000478424	RRAGC	Q9HB90	399 aa		32.86	■■■□□ 2.85
ARF1-209	ENST00000478424	NFKBIE	O00221	500 aa		32.85	■■■□□ 2.85
ARF1-209	ENST00000478424	LAMB4	A4D0S4	1761 aa		32.85	■■■□□ 2.85
ARF1-209	ENST00000478424	CLEC4G	Q6UXB4	293 aa		32.84	■■■□□ 2.85
ARF1-209	ENST00000478424	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.84	■■■□□ 2.85
ARF1-209	ENST00000478424	PRELP	P51888	382 aa		32.83	■■■□□ 2.85
ARF1-209	ENST00000478424	KDM3B	Q7LBC6	1761 aa		32.82	■■■□□ 2.84
ARF1-209	ENST00000478424	TIAM2	Q8IVF5	1701 aa		32.82	■■■□□ 2.84
ARF1-209	ENST00000478424	CACNA1S	Q13698	1873 aa		32.82	■■■□□ 2.84
ARF1-209	ENST00000478424	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.82	■■■□□ 2.84
ARF1-209	ENST00000478424	DDX10	Q13206	875 aa	Known RBP	32.81	■■■□□ 2.84
ARF1-209	ENST00000478424	RBM46	Q8TBY0	533 aa	Known RBP	32.81	■■■□□ 2.84
ARF1-209	ENST00000478424	CNKSR1	Q969H4	720 aa		32.81	■■■□□ 2.84
ARF1-209	ENST00000478424	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.8	■■■□□ 2.84
ARF1-209	ENST00000478424	APLP1	P51693	650 aa		32.8	■■■□□ 2.84
ARF1-209	ENST00000478424	RALBP1	Q15311	655 aa		32.8	■■■□□ 2.84
ARF1-209	ENST00000478424	RRP7A	Q9Y3A4	280 aa	Known RBP	32.8	■■■□□ 2.84
ARF1-209	ENST00000478424	CCDC88A	Q3V6T2	1871 aa		32.8	■■■□□ 2.84
ARF1-209	ENST00000478424	STYK1	Q6J9G0	422 aa		32.79	■■■□□ 2.84
ARF1-209	ENST00000478424	PRPF40B	Q6NWY9	871 aa	Known RBP	32.79	■■■□□ 2.84
ARF1-209	ENST00000478424	MASTL	Q96GX5	879 aa		32.79	■■■□□ 2.84
ARF1-209	ENST00000478424	SRGN	P10124	158 aa		32.78	■■■□□ 2.84
ARF1-209	ENST00000478424	EIF4A1	P60842	406 aa	Known RBP	32.78	■■■□□ 2.84
ARF1-209	ENST00000478424	HLF	Q16534	295 aa		32.78	■■■□□ 2.84
ARF1-209	ENST00000478424	MYL6B	P14649	208 aa		32.77	■■■□□ 2.84
ARF1-209	ENST00000478424	GTF2E1	P29083	439 aa	Predicted RBP	32.77	■■■□□ 2.84
ARF1-209	ENST00000478424	TPTE2	Q6XPS3	522 aa		32.76	■■■□□ 2.83
ARF1-209	ENST00000478424	TAOK3	Q9H2K8	898 aa		32.76	■■■□□ 2.83
ARF1-209	ENST00000478424	SLX4	Q8IY92	1834 aa		32.76	■■■□□ 2.83
ARF1-209	ENST00000478424	GLTPD2	A6NH11	291 aa		32.75	■■■□□ 2.83
ARF1-209	ENST00000478424	TSPYL4	Q9UJ04	414 aa		32.75	■■■□□ 2.83
ARF1-209	ENST00000478424	RIPK4	P57078	832 aa		32.74	■■■□□ 2.83
ARF1-209	ENST00000478424	ERFE	Q4G0M1	354 aa		32.74	■■■□□ 2.83
ARF1-209	ENST00000478424	KIF6	Q6ZMV9	814 aa		32.74	■■■□□ 2.83
ARF1-209	ENST00000478424	NPR1	P16066	1061 aa		32.71	■■■□□ 2.83
ARF1-209	ENST00000478424	FSTL1	Q12841	308 aa		32.71	■■■□□ 2.83
ARF1-209	ENST00000478424	SOGA3	Q5TF21	947 aa		32.71	■■■□□ 2.83
ARF1-209	ENST00000478424	ZBTB3	Q9H5J0	574 aa		32.71	■■■□□ 2.83
ARF1-209	ENST00000478424	FER1L6	Q2WGJ9	1857 aa		32.71	■■■□□ 2.83
ARF1-209	ENST00000478424	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.71	■■■□□ 2.83
ARF1-209	ENST00000478424	TTLL7	Q6ZT98	887 aa		32.7	■■■□□ 2.83
ARF1-209	ENST00000478424	CCDC146	Q8IYE0	955 aa		32.7	■■■□□ 2.83
ARF1-209	ENST00000478424	MAP3K15	Q6ZN16	1313 aa		32.7	■■■□□ 2.82
ARF1-209	ENST00000478424	RGL2	O15211	777 aa		32.69	■■■□□ 2.82
ARF1-209	ENST00000478424	VEGFA	P15692	232 aa	Predicted RBP	32.69	■■■□□ 2.82
ARF1-209	ENST00000478424	DPY19L2	Q6NUT2	758 aa		32.69	■■■□□ 2.82
ARF1-209	ENST00000478424	SMC1B	Q8NDV3	1235 aa		32.69	■■■□□ 2.82
ARF1-209	ENST00000478424	ARFGEF2	Q9Y6D5	1785 aa		32.68	■■■□□ 2.82
ARF1-209	ENST00000478424	GPT	P24298	496 aa		32.68	■■■□□ 2.82
ARF1-209	ENST00000478424	HTRA3	P83110	453 aa		32.68	■■■□□ 2.82
ARF1-209	ENST00000478424	NEUROD2	Q15784	382 aa		32.68	■■■□□ 2.82
ARF1-209	ENST00000478424	EIF2S2	P20042	333 aa	Known RBP	32.67	■■■□□ 2.82
ARF1-209	ENST00000478424	LMOD3	Q0VAK6	560 aa		32.67	■■■□□ 2.82
ARF1-209	ENST00000478424	NUTM1	Q86Y26	1132 aa		32.67	■■■□□ 2.82
ARF1-209	ENST00000478424	LTBP3	Q9NS15	1303 aa		32.67	■■■□□ 2.82
ARF1-209	ENST00000478424	TMPO	P42166	694 aa	Known RBP	32.66	■■■□□ 2.82
ARF1-209	ENST00000478424	CCDC93	Q567U6	631 aa		32.66	■■■□□ 2.82
ARF1-209	ENST00000478424	WDR90	Q96KV7	1748 aa		32.65	■■■□□ 2.82
ARF1-209	ENST00000478424	ERVV-1	B6SEH8	477 aa		32.65	■■■□□ 2.82
ARF1-209	ENST00000478424	WDR43	Q15061	677 aa	Known RBP eCLIP	32.65	■■■□□ 2.82
ARF1-209	ENST00000478424	NYX	Q9GZU5	481 aa		32.65	■■■□□ 2.82
ARF1-209	ENST00000478424	ABCC12	Q96J65	1359 aa		32.65	■■■□□ 2.82
ARF1-209	ENST00000478424	DICER1	Q9UPY3	1922 aa	Known RBP	32.63	■■■□□ 2.81
ARF1-209	ENST00000478424	NUP98	P52948	1817 aa		32.63	■■■□□ 2.81
ARF1-209	ENST00000478424	OLFM4	Q6UX06	510 aa		32.63	■■■□□ 2.81
ARF1-209	ENST00000478424	NECTIN2	Q92692	538 aa		32.61	■■■□□ 2.81
ARF1-209	ENST00000478424	LAS1L	Q9Y4W2	734 aa	Known RBP	32.61	■■■□□ 2.81
ARF1-209	ENST00000478424	ERBB4	Q15303	1308 aa		32.6	■■■□□ 2.81
ARF1-209	ENST00000478424	KLRG2	A4D1S0	409 aa	Predicted RBP	32.6	■■■□□ 2.81
ARF1-209	ENST00000478424	ANXA1	P04083	346 aa		32.6	■■■□□ 2.81
ARF1-209	ENST00000478424	UBN2	Q6ZU65	1347 aa		32.59	■■■□□ 2.81
ARF1-209	ENST00000478424	C7orf43	Q8WVR3	580 aa		32.59	■■■□□ 2.81
ARF1-209	ENST00000478424	RPGR	Q92834	1020 aa	Known RBP	32.58	■■■□□ 2.81
ARF1-209	ENST00000478424	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.58	■■■□□ 2.81
ARF1-209	ENST00000478424	DDN	O94850	711 aa	Predicted RBP	32.57	■■■□□ 2.8
ARF1-209	ENST00000478424	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.57	■■■□□ 2.8	6e-6	■□□□□ 9.8
ARF1-209	ENST00000478424	ALDH1B1	P30837	517 aa		32.56	■■■□□ 2.8
ARF1-209	ENST00000478424	PROSER3	Q2NL68	480 aa		32.56	■■■□□ 2.8
ARF1-209	ENST00000478424	SUSD4	Q5VX71	490 aa		32.56	■■■□□ 2.8
ARF1-209	ENST00000478424	DNAJC5G	Q8N7S2	189 aa		32.56	■■■□□ 2.8
ARF1-209	ENST00000478424	POTEC	B2RU33	542 aa		32.55	■■■□□ 2.8
ARF1-209	ENST00000478424	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.55	■■■□□ 2.8
ARF1-209	ENST00000478424	RUNDC1	Q96C34	613 aa		32.55	■■■□□ 2.8
ARF1-209	ENST00000478424	RTKN2	Q8IZC4	609 aa		32.54	■■■□□ 2.8
ARF1-209	ENST00000478424	BABAM1	Q9NWV8	329 aa		32.53	■■■□□ 2.8
ARF1-209	ENST00000478424	AIMP1	Q12904	312 aa	Known RBP	32.52	■■■□□ 2.8
ARF1-209	ENST00000478424	ZNF34	Q8IZ26	560 aa		32.52	■■■□□ 2.8
ARF1-209	ENST00000478424	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.52	■■■□□ 2.8
ARF1-209	ENST00000478424	PDIA6	Q15084	440 aa		32.51	■■■□□ 2.79
ARF1-209	ENST00000478424	KRT24	Q2M2I5	525 aa		32.51	■■■□□ 2.79
ARF1-209	ENST00000478424	CRY2	Q49AN0	593 aa		32.51	■■■□□ 2.79
ARF1-209	ENST00000478424	PPP1R42	Q7Z4L9	355 aa		32.51	■■■□□ 2.79
ARF1-209	ENST00000478424	TCERG1	O14776	1098 aa	Known RBP	32.5	■■■□□ 2.79
ARF1-209	ENST00000478424	NTSR2	O95665	410 aa		32.5	■■■□□ 2.79
ARF1-209	ENST00000478424	KLRG1	Q96E93	195 aa		32.5	■■■□□ 2.79
ARF1-209	ENST00000478424	ADAMTS8	Q9UP79	889 aa		32.5	■■■□□ 2.79
ARF1-209	ENST00000478424	PARP10	Q53GL7	1025 aa		32.49	■■■□□ 2.79
ARF1-209	ENST00000478424	ZNF541	Q9H0D2	1346 aa		32.49	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms