RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ZNF784Q8NCA9 323 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-221ENST00000477561 BABAM1Q9NWV8 329 aa10.81□□□□□ -0.68
HDAC6-221ENST00000477561 PIM2Q9P1W9 311 aa10.81□□□□□ -0.68
HDAC6-221ENST00000477561 SCN7AQ01118 1682 aa10.8□□□□□ -0.68
HDAC6-221ENST00000477561 AFDNP55196 1824 aaKnown RBP10.8□□□□□ -0.68
HDAC6-221ENST00000477561 NPHP1O15259 732 aa10.8□□□□□ -0.68
HDAC6-221ENST00000477561 DALRD3Q5D0E6 543 aaKnown RBP10.8□□□□□ -0.68
HDAC6-221ENST00000477561 PRR5LQ6MZQ0 368 aa10.8□□□□□ -0.68
HDAC6-221ENST00000477561 ARHGAP27Q6ZUM4 889 aa10.8□□□□□ -0.68
HDAC6-221ENST00000477561 C2CD5Q86YS7 1000 aa10.8□□□□□ -0.68
HDAC6-221ENST00000477561 ZNF652Q9Y2D9 606 aa10.8□□□□□ -0.68
HDAC6-221ENST00000477561 CHD4Q14839 1912 aa10.8□□□□□ -0.68
HDAC6-221ENST00000477561 PROSER3Q2NL68 480 aa10.79□□□□□ -0.68
HDAC6-221ENST00000477561 CLEC4GQ6UXB4 293 aa10.79□□□□□ -0.68
HDAC6-221ENST00000477561 CNBD1Q8NA66 436 aa10.79□□□□□ -0.68
HDAC6-221ENST00000477561 ZBTB3Q9H5J0 574 aa10.79□□□□□ -0.68
HDAC6-221ENST00000477561 NIP7Q9Y221 180 aaKnown RBP eCLIP10.79□□□□□ -0.68
HDAC6-221ENST00000477561 LAMB4A4D0S4 1761 aa10.79□□□□□ -0.68
HDAC6-221ENST00000477561 H0YIN7 160 aa10.78□□□□□ -0.68
HDAC6-221ENST00000477561 PDIA6Q15084 440 aa10.78□□□□□ -0.68
HDAC6-221ENST00000477561 KIF6Q6ZMV9 814 aa10.78□□□□□ -0.68
HDAC6-221ENST00000477561 NBPF5PQ86XG9 351 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-221ENST00000477561 CFAP44Q96MT7 982 aa10.78□□□□□ -0.68
HDAC6-221ENST00000477561 MBIPQ9NS73 344 aa10.78□□□□□ -0.68
HDAC6-221ENST00000477561 SALL2Q9Y467 1007 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-221ENST00000477561 NRXN2Q9P2S2 1712 aa10.78□□□□□ -0.68
HDAC6-221ENST00000477561 BCORQ6W2J9 1755 aa10.77□□□□□ -0.68
HDAC6-221ENST00000477561 GPTP24298 496 aa10.77□□□□□ -0.69
HDAC6-221ENST00000477561 ST5P78524 1137 aa10.77□□□□□ -0.69
HDAC6-221ENST00000477561 AIMP1Q12904 312 aaKnown RBP10.77□□□□□ -0.69
HDAC6-221ENST00000477561 ZNF622Q969S3 477 aaKnown RBP eCLIP10.77□□□□□ -0.691e-7■□□□□ 10.9
HDAC6-221ENST00000477561 BRIP1Q9BX63 1249 aa10.77□□□□□ -0.69
HDAC6-221ENST00000477561 ZNF219Q9P2Y4 722 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-221ENST00000477561 MAP3K15Q6ZN16 1313 aa10.77□□□□□ -0.69
HDAC6-221ENST00000477561 ERVV-1B6SEH8 477 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 CCER2I3L3R5 266 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 ELL2O00472 640 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-221ENST00000477561 ZNF853P0CG23 659 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 PDE6BP35913 854 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 DUSP27Q5VZP5 1158 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 COPS6Q7L5N1 327 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 LRP10Q7Z4F1 713 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 TTLL6Q8N841 843 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 ZNF526Q8TF50 670 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-221ENST00000477561 IFT57Q9NWB7 429 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 CHPF2Q9P2E5 772 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 ERBB4Q15303 1308 aa10.76□□□□□ -0.69
HDAC6-221ENST00000477561 GTF2E1P29083 439 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-221ENST00000477561 GNAI1P63096 354 aa10.75□□□□□ -0.69
HDAC6-221ENST00000477561 CALD1Q05682 793 aaKnown RBP10.75□□□□□ -0.69
HDAC6-221ENST00000477561 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
HDAC6-221ENST00000477561 TPTE2Q6XPS3 522 aa10.75□□□□□ -0.69
HDAC6-221ENST00000477561 NUTM1Q86Y26 1132 aa10.75□□□□□ -0.69
HDAC6-221ENST00000477561 XAGE3Q8WTP9 111 aa10.75□□□□□ -0.69
HDAC6-221ENST00000477561 ATP10DQ9P241 1426 aa10.75□□□□□ -0.69
HDAC6-221ENST00000477561 BRCA1P38398 1863 aaKnown RBP10.74□□□□□ -0.69
HDAC6-221ENST00000477561 WWC1Q8IX03 1113 aa10.74□□□□□ -0.69
HDAC6-221ENST00000477561 TSR2Q969E8 191 aaKnown RBP10.74□□□□□ -0.69
HDAC6-221ENST00000477561 ZNF428Q96B54 188 aa10.74□□□□□ -0.69
HDAC6-221ENST00000477561 DDX21Q9NR30 783 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDAC6-221ENST00000477561 ANKRD31Q8N7Z5 1873 aa10.74□□□□□ -0.69
HDAC6-221ENST00000477561 RGL2O15211 777 aa10.73□□□□□ -0.69
HDAC6-221ENST00000477561 RASSF7Q02833 373 aa10.73□□□□□ -0.69
HDAC6-221ENST00000477561 ERFEQ4G0M1 354 aa10.73□□□□□ -0.69
HDAC6-221ENST00000477561 SUSD4Q5VX71 490 aa10.73□□□□□ -0.69
HDAC6-221ENST00000477561 C9orf131Q5VYM1 1079 aa10.73□□□□□ -0.69
HDAC6-221ENST00000477561 GIGYF2Q6Y7W6 1299 aaKnown RBP10.73□□□□□ -0.69
HDAC6-221ENST00000477561 ZNF34Q8IZ26 560 aa10.73□□□□□ -0.69
HDAC6-221ENST00000477561 C8orf58Q8NAV2 365 aa10.73□□□□□ -0.69
HDAC6-221ENST00000477561 UBN2Q6ZU65 1347 aa10.73□□□□□ -0.69
HDAC6-221ENST00000477561 C21orf2O43822 256 aa10.72□□□□□ -0.69
HDAC6-221ENST00000477561 HOXB7P09629 217 aa10.72□□□□□ -0.69
HDAC6-221ENST00000477561 SRGNP10124 158 aa10.72□□□□□ -0.69
HDAC6-221ENST00000477561 CCDC27Q2M243 656 aa10.72□□□□□ -0.69
HDAC6-221ENST00000477561 TSPYL6Q8N831 410 aa10.72□□□□□ -0.69
HDAC6-221ENST00000477561 NYXQ9GZU5 481 aa10.72□□□□□ -0.69
HDAC6-221ENST00000477561 DBF4Q9UBU7 674 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-221ENST00000477561 PDZRN3Q9UPQ7 1066 aa10.72□□□□□ -0.69
HDAC6-221ENST00000477561 ADCY9O60503 1353 aa10.71□□□□□ -0.69
HDAC6-221ENST00000477561 COL11A2P13942 1736 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-221ENST00000477561 NUP98P52948 1817 aa10.71□□□□□ -0.69
HDAC6-221ENST00000477561 STYK1Q6J9G0 422 aa10.71□□□□□ -0.69
HDAC6-221ENST00000477561 MASTLQ96GX5 879 aa10.71□□□□□ -0.69
HDAC6-221ENST00000477561 ABCC12Q96J65 1359 aa10.71□□□□□ -0.69
HDAC6-221ENST00000477561 GPBP1L1Q9HC44 474 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-221ENST00000477561 RNF181Q9P0P0 153 aa10.71□□□□□ -0.69
HDAC6-221ENST00000477561 ARFGEF1Q9Y6D6 1849 aa10.71□□□□□ -0.69
HDAC6-221ENST00000477561 DLEC1Q9Y238 1755 aa10.7□□□□□ -0.7
HDAC6-221ENST00000477561 KLRG2A4D1S0 409 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-221ENST00000477561 TCERG1O14776 1098 aaKnown RBP10.7□□□□□ -0.7
HDAC6-221ENST00000477561 NTSR2O95665 410 aa10.7□□□□□ -0.7
HDAC6-221ENST00000477561 NPR1P16066 1061 aa10.7□□□□□ -0.7
HDAC6-221ENST00000477561 PRELPP51888 382 aa10.7□□□□□ -0.7
HDAC6-221ENST00000477561 PRPF40BQ6NWY9 871 aaKnown RBP10.7□□□□□ -0.7
HDAC6-221ENST00000477561 ANKRD13DQ6ZTN6 518 aa10.7□□□□□ -0.7
HDAC6-221ENST00000477561 PPP1R42Q7Z4L9 355 aa10.7□□□□□ -0.7
HDAC6-221ENST00000477561 CNKSR1Q969H4 720 aa10.7□□□□□ -0.7
HDAC6-221ENST00000477561 PHAXQ9H814 394 aaKnown RBP10.7□□□□□ -0.7
HDAC6-221ENST00000477561 HYPKQ9NX55 129 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms