RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 USPL1Q5W0Q7 1092 aa22.7■■□□□ 1.22
SREBF1-211ENST00000476994 COL15A1P39059 1388 aa22.69■■□□□ 1.22
SREBF1-211ENST00000476994 STARD3NLO95772 234 aa22.69■■□□□ 1.22
SREBF1-211ENST00000476994 DALRD3Q5D0E6 543 aaKnown RBP22.69■■□□□ 1.22
SREBF1-211ENST00000476994 ZNF428Q96B54 188 aa22.69■■□□□ 1.22
SREBF1-211ENST00000476994 AFDNP55196 1824 aaKnown RBP22.68■■□□□ 1.22
SREBF1-211ENST00000476994 RARSP54136 660 aaKnown RBP22.68■■□□□ 1.22
SREBF1-211ENST00000476994 NARFQ9UHQ1 456 aa22.68■■□□□ 1.22
SREBF1-211ENST00000476994 DDR1Q08345 913 aa22.67■■□□□ 1.22
SREBF1-211ENST00000476994 NPM2Q86SE8 214 aaKnown RBP22.67■■□□□ 1.22
SREBF1-211ENST00000476994 A0A087WZG4 1122 aa22.66■■□□□ 1.22
SREBF1-211ENST00000476994 POLRMTO00411 1230 aaKnown RBP22.66■■□□□ 1.22
SREBF1-211ENST00000476994 TM4SF1P30408 202 aa22.66■■□□□ 1.22
SREBF1-211ENST00000476994 HDGFL1Q5TGJ6 251 aa22.66■■□□□ 1.22
SREBF1-211ENST00000476994 SSH1Q8WYL5 1049 aa22.66■■□□□ 1.22
SREBF1-211ENST00000476994 TEX13AQ9BXU3 409 aaPredicted RBP22.66■■□□□ 1.22
SREBF1-211ENST00000476994 ZBTB1Q9Y2K1 713 aa22.66■■□□□ 1.22
SREBF1-211ENST00000476994 PDIA6Q15084 440 aa22.65■■□□□ 1.22
SREBF1-211ENST00000476994 ALDH1L2Q3SY69 923 aa22.65■■□□□ 1.22
SREBF1-211ENST00000476994 RCAN3Q9UKA8 241 aa22.65■■□□□ 1.22
SREBF1-211ENST00000476994 EIF2S2P20042 333 aaKnown RBP22.64■■□□□ 1.21
SREBF1-211ENST00000476994 KCNA3P22001 575 aa22.64■■□□□ 1.21
SREBF1-211ENST00000476994 CANXP27824 592 aaKnown RBP22.64■■□□□ 1.21
SREBF1-211ENST00000476994 LRP10Q7Z4F1 713 aa22.64■■□□□ 1.21
SREBF1-211ENST00000476994 ERBB4Q15303 1308 aa22.63■■□□□ 1.21
SREBF1-211ENST00000476994 NBPF26B4DH59 902 aa22.63■■□□□ 1.21
SREBF1-211ENST00000476994 HSPA6P17066 643 aa22.63■■□□□ 1.21
SREBF1-211ENST00000476994 BRPF1P55201 1214 aaPredicted RBP22.63■■□□□ 1.21
SREBF1-211ENST00000476994 CCDC30Q5VVM6 783 aa22.63■■□□□ 1.21
SREBF1-211ENST00000476994 NBPF10Q6P3W6 841 aaKnown RBP22.63■■□□□ 1.21
SREBF1-211ENST00000476994 MRPL50Q8N5N7 158 aaKnown RBP22.63■■□□□ 1.21
SREBF1-211ENST00000476994 NBPF15Q8N660 670 aa22.63■■□□□ 1.21
SREBF1-211ENST00000476994 NECTIN2Q92692 538 aa22.63■■□□□ 1.21
SREBF1-211ENST00000476994 TCERG1O14776 1098 aaKnown RBP22.62■■□□□ 1.21
SREBF1-211ENST00000476994 CENPBP07199 599 aaPredicted RBP22.62■■□□□ 1.21
SREBF1-211ENST00000476994 PROSER3Q2NL68 480 aa22.62■■□□□ 1.21
SREBF1-211ENST00000476994 CHPF2Q9P2E5 772 aa22.62■■□□□ 1.21
SREBF1-211ENST00000476994 NRXN2Q9P2S2 1712 aa22.62■■□□□ 1.21
SREBF1-211ENST00000476994 CEP350Q5VT06 3117 aa22.62■■□□□ 1.21
SREBF1-211ENST00000476994 BCAR3O75815 825 aa22.61■■□□□ 1.21
SREBF1-211ENST00000476994 SBF1O95248 1867 aa22.61■■□□□ 1.21
SREBF1-211ENST00000476994 A1BGP04217 495 aa22.61■■□□□ 1.21
SREBF1-211ENST00000476994 CHRNA5P30532 468 aa22.61■■□□□ 1.21
SREBF1-211ENST00000476994 NFIXQ14938 502 aa22.61■■□□□ 1.21
SREBF1-211ENST00000476994 BCL2L13Q9BXK5 485 aa22.61■■□□□ 1.21
SREBF1-211ENST00000476994 DLEC1Q9Y238 1755 aa22.61■■□□□ 1.21
SREBF1-211ENST00000476994 KIF3CO14782 793 aa22.6■■□□□ 1.21
SREBF1-211ENST00000476994 C9orf131Q5VYM1 1079 aa22.6■■□□□ 1.21
SREBF1-211ENST00000476994 DDX21Q9NR30 783 aaKnown RBP eCLIP22.6■■□□□ 1.21
SREBF1-211ENST00000476994 BCORQ6W2J9 1755 aa22.6■■□□□ 1.21
SREBF1-211ENST00000476994 ARFGEF2Q9Y6D5 1785 aa22.6■■□□□ 1.21
SREBF1-211ENST00000476994 ANXA1P04083 346 aa22.59■■□□□ 1.21
SREBF1-211ENST00000476994 SERPINB2P05120 415 aa22.59■■□□□ 1.21
SREBF1-211ENST00000476994 CHMP4AQ9BY43 222 aa22.59■■□□□ 1.21
SREBF1-211ENST00000476994 ZNF330Q9Y3S2 320 aaPredicted RBP22.59■■□□□ 1.21
SREBF1-211ENST00000476994 RNF123Q5XPI4 1314 aa22.58■■□□□ 1.21
SREBF1-211ENST00000476994 TOMM70O94826 608 aa22.58■■□□□ 1.21
SREBF1-211ENST00000476994 PIP4K2AP48426 406 aaPredicted RBP22.58■■□□□ 1.21
SREBF1-211ENST00000476994 G2E3Q7L622 706 aa22.58■■□□□ 1.21
SREBF1-211ENST00000476994 C16orf71Q8IYS4 520 aaPredicted RBP22.58■■□□□ 1.21
SREBF1-211ENST00000476994 SMC4Q9NTJ3 1288 aa22.58■■□□□ 1.21
SREBF1-211ENST00000476994 DBF4Q9UBU7 674 aaPredicted RBP22.58■■□□□ 1.21
SREBF1-211ENST00000476994 KDM2BQ8NHM5 1336 aa22.57■■□□□ 1.2
SREBF1-211ENST00000476994 NUP98P52948 1817 aa22.57■■□□□ 1.2
SREBF1-211ENST00000476994 EIF5P55010 431 aaKnown RBP22.57■■□□□ 1.2
SREBF1-211ENST00000476994 RNF181Q9P0P0 153 aa22.57■■□□□ 1.2
SREBF1-211ENST00000476994 SCN7AQ01118 1682 aa22.56■■□□□ 1.2
SREBF1-211ENST00000476994 H0YIN7 160 aa22.56■■□□□ 1.2
SREBF1-211ENST00000476994 SLC4A2P04920 1241 aa22.56■■□□□ 1.2
SREBF1-211ENST00000476994 BICDL1Q6ZP65 573 aa22.56■■□□□ 1.2
SREBF1-211ENST00000476994 STK31Q9BXU1 1019 aa22.56■■□□□ 1.2
SREBF1-211ENST00000476994 CCDC88AQ3V6T2 1871 aa22.56■■□□□ 1.2
SREBF1-211ENST00000476994 IL6STP40189 918 aaPredicted RBP22.55■■□□□ 1.2
SREBF1-211ENST00000476994 ANKRD36CQ5JPF3 1778 aa22.55■■□□□ 1.2
SREBF1-211ENST00000476994 NPHP1O15259 732 aa22.54■■□□□ 1.2
SREBF1-211ENST00000476994 TTLL6Q8N841 843 aa22.54■■□□□ 1.2
SREBF1-211ENST00000476994 PHAXQ9H814 394 aaKnown RBP22.54■■□□□ 1.2
SREBF1-211ENST00000476994 BCL2L12Q9HB09 334 aa22.54■■□□□ 1.2
SREBF1-211ENST00000476994 HYPKQ9NX55 129 aa22.54■■□□□ 1.2
SREBF1-211ENST00000476994 PDZRN3Q9UPQ7 1066 aa22.54■■□□□ 1.2
SREBF1-211ENST00000476994 TNRC6CQ9HCJ0 1690 aaKnown RBP22.53■■□□□ 1.2
SREBF1-211ENST00000476994 C2CD5Q86YS7 1000 aa22.53■■□□□ 1.2
SREBF1-211ENST00000476994 KIF16BQ96L93 1317 aa22.53■■□□□ 1.2
SREBF1-211ENST00000476994 MYL6BP14649 208 aa22.52■■□□□ 1.2
SREBF1-211ENST00000476994 APLP1P51693 650 aa22.52■■□□□ 1.2
SREBF1-211ENST00000476994 FLIIQ13045 1269 aa22.52■■□□□ 1.2
SREBF1-211ENST00000476994 NMRK2Q9NPI5 230 aa22.52■■□□□ 1.2
SREBF1-211ENST00000476994 TBC1D2BQ9UPU7 963 aa22.52■■□□□ 1.2
SREBF1-211ENST00000476994 CARMIL3Q8ND23 1372 aa22.51■■□□□ 1.19
SREBF1-211ENST00000476994 PDE6BP35913 854 aa22.51■■□□□ 1.19
SREBF1-211ENST00000476994 ZC3H4Q9UPT8 1303 aaKnown RBP22.51■■□□□ 1.19
SREBF1-211ENST00000476994 XAGE3Q8WTP9 111 aa22.5■■□□□ 1.19
SREBF1-211ENST00000476994 SETDB2Q96T68 719 aa22.5■■□□□ 1.19
SREBF1-211ENST00000476994 NOB1Q9ULX3 412 aaKnown RBP22.5■■□□□ 1.19
SREBF1-211ENST00000476994 RRP1P56182 461 aaKnown RBP22.49■■□□□ 1.19
SREBF1-211ENST00000476994 TBC1D9BQ66K14 1250 aa22.49■■□□□ 1.19
SREBF1-211ENST00000476994 ARHGAP45Q92619 1136 aa22.49■■□□□ 1.19
SREBF1-211ENST00000476994 PTPRCP08575 1304 aa22.49■■□□□ 1.19
SREBF1-211ENST00000476994 ANKRD31Q8N7Z5 1873 aa22.49■■□□□ 1.19
SREBF1-211ENST00000476994 LMNB1P20700 586 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms