RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 TMPOP42166 694 aaKnown RBP25.11■■□□□ 1.61
GMDS-204ENST00000476972 RIPK4P57078 832 aa25.11■■□□□ 1.61
GMDS-204ENST00000476972 ZNF219Q9P2Y4 722 aaPredicted RBP25.11■■□□□ 1.61
GMDS-204ENST00000476972 PDZRN3Q9UPQ7 1066 aa25.11■■□□□ 1.61
GMDS-204ENST00000476972 C21orf2O43822 256 aa25.1■■□□□ 1.61
GMDS-204ENST00000476972 VEGFAP15692 232 aaPredicted RBP25.1■■□□□ 1.61
GMDS-204ENST00000476972 PNISRQ8TF01 805 aaKnown RBP25.1■■□□□ 1.61
GMDS-204ENST00000476972 ADAMTS8Q9UP79 889 aa25.1■■□□□ 1.61
GMDS-204ENST00000476972 NRXN2Q9P2S2 1712 aa25.09■■□□□ 1.61
GMDS-204ENST00000476972 BCORQ6W2J9 1755 aa25.09■■□□□ 1.61
GMDS-204ENST00000476972 PIP4K2AP48426 406 aaPredicted RBP25.09■■□□□ 1.61
GMDS-204ENST00000476972 DZIP3Q86Y13 1208 aaKnown RBP25.09■■□□□ 1.61
GMDS-204ENST00000476972 SMC1BQ8NDV3 1235 aa25.09■■□□□ 1.61
GMDS-204ENST00000476972 RUNDC1Q96C34 613 aa25.09■■□□□ 1.61
GMDS-204ENST00000476972 KLRG1Q96E93 195 aa25.08■■□□□ 1.61
GMDS-204ENST00000476972 RRP7AQ9Y3A4 280 aaKnown RBP25.08■■□□□ 1.61
GMDS-204ENST00000476972 AFDNP55196 1824 aaKnown RBP25.07■■□□□ 1.6
GMDS-204ENST00000476972 LMOD3Q0VAK6 560 aa25.07■■□□□ 1.6
GMDS-204ENST00000476972 CNBD1Q8NA66 436 aa25.07■■□□□ 1.6
GMDS-204ENST00000476972 NPHP1O15259 732 aa25.06■■□□□ 1.6
GMDS-204ENST00000476972 ST5P78524 1137 aa25.04■■□□□ 1.6
GMDS-204ENST00000476972 NEUROD2Q15784 382 aa25.04■■□□□ 1.6
GMDS-204ENST00000476972 DPY19L2Q6NUT2 758 aa25.04■■□□□ 1.6
GMDS-204ENST00000476972 POTECB2RU33 542 aa25.03■■□□□ 1.6
GMDS-204ENST00000476972 EIF4A1P60842 406 aaKnown RBP25.03■■□□□ 1.6
GMDS-204ENST00000476972 ERFEQ4G0M1 354 aa25.03■■□□□ 1.6
GMDS-204ENST00000476972 CNKSR1Q969H4 720 aa25.03■■□□□ 1.6
GMDS-204ENST00000476972 SRGNP10124 158 aa25.02■■□□□ 1.6
GMDS-204ENST00000476972 STYK1Q6J9G0 422 aa25.02■■□□□ 1.6
GMDS-204ENST00000476972 CLEC4GQ6UXB4 293 aa25.02■■□□□ 1.6
GMDS-204ENST00000476972 JMYQ8N9B5 988 aa25.02■■□□□ 1.6
GMDS-204ENST00000476972 TSPYL4Q9UJ04 414 aa25.02■■□□□ 1.6
GMDS-204ENST00000476972 MASTLQ96GX5 879 aa25.01■■□□□ 1.59
GMDS-204ENST00000476972 SBF1O95248 1867 aa25■■□□□ 1.59
GMDS-204ENST00000476972 NBPF26B4DH59 902 aa25■■□□□ 1.59
GMDS-204ENST00000476972 CCDC184Q52MB2 194 aa25■■□□□ 1.59
GMDS-204ENST00000476972 PRPF40BQ6NWY9 871 aaKnown RBP25■■□□□ 1.59
GMDS-204ENST00000476972 NBPF10Q6P3W6 841 aaKnown RBP25■■□□□ 1.59
GMDS-204ENST00000476972 NBPF5PQ86XG9 351 aaPredicted RBP25■■□□□ 1.59
GMDS-204ENST00000476972 NBPF15Q8N660 670 aa25■■□□□ 1.59
GMDS-204ENST00000476972 TRIM35Q9UPQ4 493 aa25■■□□□ 1.59
GMDS-204ENST00000476972 TAOK3Q9H2K8 898 aa24.99■■□□□ 1.59
GMDS-204ENST00000476972 ZNF652Q9Y2D9 606 aa24.99■■□□□ 1.59
GMDS-204ENST00000476972 LTBP3Q9NS15 1303 aa24.97■■□□□ 1.59
GMDS-204ENST00000476972 BABAM1Q9NWV8 329 aa24.97■■□□□ 1.59
GMDS-204ENST00000476972 ANP32CO43423 234 aa24.96■■□□□ 1.59
GMDS-204ENST00000476972 TPTE2Q6XPS3 522 aa24.96■■□□□ 1.59
GMDS-204ENST00000476972 C7orf43Q8WVR3 580 aa24.96■■□□□ 1.59
GMDS-204ENST00000476972 NIP7Q9Y221 180 aaKnown RBP eCLIP24.96■■□□□ 1.59
GMDS-204ENST00000476972 SOGA3Q5TF21 947 aa24.95■■□□□ 1.58
GMDS-204ENST00000476972 DLEC1Q9Y238 1755 aa24.95■■□□□ 1.58
GMDS-204ENST00000476972 TNRC6CQ9HCJ0 1690 aaKnown RBP24.94■■□□□ 1.58
GMDS-204ENST00000476972 KLRG2A4D1S0 409 aaPredicted RBP24.94■■□□□ 1.58
GMDS-204ENST00000476972 FAM177BA6PVY3 158 aa24.94■■□□□ 1.58
GMDS-204ENST00000476972 DDNO94850 711 aaPredicted RBP24.94■■□□□ 1.58
GMDS-204ENST00000476972 WDR90Q96KV7 1748 aa24.94■■□□□ 1.58
GMDS-204ENST00000476972 ANKRD31Q8N7Z5 1873 aa24.94■■□□□ 1.58
GMDS-204ENST00000476972 APAF1O14727 1248 aa24.93■■□□□ 1.58
GMDS-204ENST00000476972 NPR1P16066 1061 aa24.93■■□□□ 1.58
GMDS-204ENST00000476972 HLFQ16534 295 aa24.93■■□□□ 1.58
GMDS-204ENST00000476972 PCNTO95613 3336 aa24.92■■□□□ 1.58
GMDS-204ENST00000476972 RGL2O15211 777 aa24.92■■□□□ 1.58
GMDS-204ENST00000476972 CHL1O00533 1208 aa24.91■■□□□ 1.58
GMDS-204ENST00000476972 COL13A1Q5TAT6 717 aaPredicted RBP24.91■■□□□ 1.58
GMDS-204ENST00000476972 LAS1LQ9Y4W2 734 aaKnown RBP24.91■■□□□ 1.58
GMDS-204ENST00000476972 CCDC93Q567U6 631 aa24.9■■□□□ 1.58
GMDS-204ENST00000476972 OLFM4Q6UX06 510 aa24.89■■□□□ 1.58
GMDS-204ENST00000476972 NGEFQ8N5V2 710 aa24.89■■□□□ 1.58
GMDS-204ENST00000476972 MRS2Q9HD23 443 aa24.89■■□□□ 1.58
GMDS-204ENST00000476972 COL11A2P13942 1736 aaPredicted RBP24.89■■□□□ 1.57
GMDS-204ENST00000476972 ERBB4Q15303 1308 aa24.88■■□□□ 1.57
GMDS-204ENST00000476972 POTEIP0CG38 1075 aa24.88■■□□□ 1.57
GMDS-204ENST00000476972 POTEJP0CG39 1038 aa24.88■■□□□ 1.57
GMDS-204ENST00000476972 MYL6BP14649 208 aa24.88■■□□□ 1.57
GMDS-204ENST00000476972 GTF2E1P29083 439 aaPredicted RBP24.88■■□□□ 1.57
GMDS-204ENST00000476972 CHADLQ6NUI6 762 aa24.88■■□□□ 1.57
GMDS-204ENST00000476972 NUP98P52948 1817 aa24.86■■□□□ 1.57
GMDS-204ENST00000476972 EIF2S2P20042 333 aaKnown RBP24.86■■□□□ 1.57
GMDS-204ENST00000476972 FKBP4Q02790 459 aaKnown RBP eCLIP24.86■■□□□ 1.57
GMDS-204ENST00000476972 KRT24Q2M2I5 525 aa24.86■■□□□ 1.57
GMDS-204ENST00000476972 ZNF277Q9NRM2 450 aaPredicted RBP24.86■■□□□ 1.57
GMDS-204ENST00000476972 ALDH1B1P30837 517 aa24.85■■□□□ 1.57
GMDS-204ENST00000476972 TTLL7Q6ZT98 887 aa24.85■■□□□ 1.57
GMDS-204ENST00000476972 CFAP44Q96MT7 982 aa24.85■■□□□ 1.57
GMDS-204ENST00000476972 SLX4Q8IY92 1834 aa24.84■■□□□ 1.57
GMDS-204ENST00000476972 KIF6Q6ZMV9 814 aa24.84■■□□□ 1.57
GMDS-204ENST00000476972 RTKN2Q8IZC4 609 aa24.84■■□□□ 1.57
GMDS-204ENST00000476972 MAP3K15Q6ZN16 1313 aa24.84■■□□□ 1.57
GMDS-204ENST00000476972 ERVV-1B6SEH8 477 aa24.83■■□□□ 1.57
GMDS-204ENST00000476972 TIAM2Q8IVF5 1701 aa24.83■■□□□ 1.57
GMDS-204ENST00000476972 IQCA1LA6NCM1 817 aa24.82■■□□□ 1.56
GMDS-204ENST00000476972 PDIA6Q15084 440 aa24.82■■□□□ 1.56
GMDS-204ENST00000476972 PROSER3Q2NL68 480 aa24.82■■□□□ 1.56
GMDS-204ENST00000476972 LRP10Q7Z4F1 713 aa24.82■■□□□ 1.56
GMDS-204ENST00000476972 NUTM1Q86Y26 1132 aa24.82■■□□□ 1.56
GMDS-204ENST00000476972 NECTIN2Q92692 538 aa24.82■■□□□ 1.56
GMDS-204ENST00000476972 L3MBTL3Q96JM7 780 aaPredicted RBP24.82■■□□□ 1.56
GMDS-204ENST00000476972 MBIPQ9NS73 344 aa24.82■■□□□ 1.56
GMDS-204ENST00000476972 FER1L6Q2WGJ9 1857 aa24.81■■□□□ 1.56
GMDS-204ENST00000476972 ANXA1P04083 346 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms