RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 KRT76Q01546 638 aa12.48□□□□□ -0.41
SMC5-203ENST00000475540 LRRC69Q6ZNQ3 347 aa12.48□□□□□ -0.41
SMC5-203ENST00000475540 GAS6Q14393 721 aa12.47□□□□□ -0.41
SMC5-203ENST00000475540 OCLNQ16625 522 aa12.47□□□□□ -0.41
SMC5-203ENST00000475540 ATXN7L1Q9ULK2 861 aaPredicted RBP12.47□□□□□ -0.41
SMC5-203ENST00000475540 BNIP3LO60238 219 aa12.46□□□□□ -0.41
SMC5-203ENST00000475540 HIF1AQ16665 826 aa12.46□□□□□ -0.41
SMC5-203ENST00000475540 MBIPQ9NS73 344 aa12.46□□□□□ -0.41
SMC5-203ENST00000475540 NSFL1CQ9UNZ2 370 aaKnown RBP12.46□□□□□ -0.41
SMC5-203ENST00000475540 MX2P20592 715 aa12.45□□□□□ -0.42
SMC5-203ENST00000475540 FKBP5Q13451 457 aaPredicted RBP12.45□□□□□ -0.42
SMC5-203ENST00000475540 RTN1Q16799 776 aa12.45□□□□□ -0.42
SMC5-203ENST00000475540 ABHD17AQ96GS6 310 aa12.45□□□□□ -0.42
SMC5-203ENST00000475540 CXXC1Q9P0U4 656 aaPredicted RBP12.45□□□□□ -0.42
SMC5-203ENST00000475540 SAMD5Q5TGI4 173 aa12.44□□□□□ -0.42
SMC5-203ENST00000475540 NDFIP2Q9NV92 336 aa12.44□□□□□ -0.42
SMC5-203ENST00000475540 KHNYNO15037 678 aaKnown RBP12.43□□□□□ -0.42
SMC5-203ENST00000475540 SRSF11Q05519 484 aaKnown RBP12.43□□□□□ -0.42
SMC5-203ENST00000475540 SUSD3Q96L08 255 aa12.43□□□□□ -0.42
SMC5-203ENST00000475540 TMEM88BA6NKF7 163 aa12.42□□□□□ -0.42
SMC5-203ENST00000475540 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
SMC5-203ENST00000475540 TNP2Q05952 138 aa12.42□□□□□ -0.42
SMC5-203ENST00000475540 DCDC2BA2VCK2 349 aa12.41□□□□□ -0.42
SMC5-203ENST00000475540 FAM157BP0CG42 384 aa12.41□□□□□ -0.42
SMC5-203ENST00000475540 MAPTP10636 758 aaKnown RBP12.41□□□□□ -0.42
SMC5-203ENST00000475540 FGFR3P22607 806 aa12.41□□□□□ -0.42
SMC5-203ENST00000475540 HSH2DQ96JZ2 352 aa12.41□□□□□ -0.42
SMC5-203ENST00000475540 PTCD1O75127 700 aaKnown RBP12.4□□□□□ -0.42
SMC5-203ENST00000475540 ZSCAN1Q8NBB4 408 aa12.4□□□□□ -0.42
SMC5-203ENST00000475540 ZNF280CQ8ND82 737 aa12.4□□□□□ -0.42
SMC5-203ENST00000475540 KLRG1Q96E93 195 aa12.4□□□□□ -0.42
SMC5-203ENST00000475540 SLAIN2Q9P270 581 aa12.4□□□□□ -0.42
SMC5-203ENST00000475540 IGF1RP08069 1367 aa12.4□□□□□ -0.42
SMC5-203ENST00000475540 ADAMTS2O95450 1211 aa12.39□□□□□ -0.43
SMC5-203ENST00000475540 COL26A1Q96A83 441 aa12.39□□□□□ -0.43
SMC5-203ENST00000475540 MYO19Q96H55 970 aa12.39□□□□□ -0.43
SMC5-203ENST00000475540 CEP63Q96MT8 703 aa12.39□□□□□ -0.43
SMC5-203ENST00000475540 MKNK1Q9BUB5 465 aa12.39□□□□□ -0.43
SMC5-203ENST00000475540 QTRT2Q9H974 415 aaKnown RBP12.39□□□□□ -0.43
SMC5-203ENST00000475540 SLURP2P0DP57 97 aa12.38□□□□□ -0.43
SMC5-203ENST00000475540 BMP4P12644 408 aa12.38□□□□□ -0.43
SMC5-203ENST00000475540 MAP2K3P46734 347 aa12.38□□□□□ -0.43
SMC5-203ENST00000475540 LAMC2Q13753 1193 aa12.38□□□□□ -0.43
SMC5-203ENST00000475540 C11orf91Q3C1V1 193 aa12.38□□□□□ -0.43
SMC5-203ENST00000475540 USTQ9Y2C2 406 aa12.38□□□□□ -0.43
SMC5-203ENST00000475540 CTBSQ01459 385 aa12.37□□□□□ -0.43
SMC5-203ENST00000475540 PDE4CQ08493 712 aa12.37□□□□□ -0.43
SMC5-203ENST00000475540 DGKZQ13574 1117 aa12.37□□□□□ -0.43
SMC5-203ENST00000475540 KLK14Q9P0G3 267 aa12.37□□□□□ -0.43
SMC5-203ENST00000475540 MARK1Q9P0L2 795 aa12.37□□□□□ -0.43
SMC5-203ENST00000475540 CARNS1A5YM72 827 aa12.35□□□□□ -0.43
SMC5-203ENST00000475540 EFSO43281 561 aa12.35□□□□□ -0.43
SMC5-203ENST00000475540 CD33P20138 364 aa12.35□□□□□ -0.43
SMC5-203ENST00000475540 BTLAQ7Z6A9 289 aa12.35□□□□□ -0.43
SMC5-203ENST00000475540 TGFBR3LH3BV60 316 aa12.34□□□□□ -0.43
SMC5-203ENST00000475540 SSFA2P28290 1259 aa12.34□□□□□ -0.43
SMC5-203ENST00000475540 NAA30Q147X3 362 aaPredicted RBP12.34□□□□□ -0.43
SMC5-203ENST00000475540 COX20Q5RI15 118 aa12.34□□□□□ -0.43
SMC5-203ENST00000475540 FAM182BQ5T319 152 aa12.34□□□□□ -0.43
SMC5-203ENST00000475540 IER5Q5VY09 327 aa12.34□□□□□ -0.43
SMC5-203ENST00000475540 C16orf46Q6P387 395 aa12.34□□□□□ -0.43
SMC5-203ENST00000475540 BRD7Q9NPI1 651 aa12.34□□□□□ -0.43
SMC5-203ENST00000475540 LRFN2Q9ULH4 789 aa12.34□□□□□ -0.43
SMC5-203ENST00000475540 C2CD2LO14523 706 aa12.33□□□□□ -0.44
SMC5-203ENST00000475540 CAPN12Q6ZSI9 719 aa12.33□□□□□ -0.44
SMC5-203ENST00000475540 BCS1LQ9Y276 419 aa12.33□□□□□ -0.44
SMC5-203ENST00000475540 LORP23490 312 aaPredicted RBP12.32□□□□□ -0.44
SMC5-203ENST00000475540 TYRO3Q06418 890 aa12.32□□□□□ -0.44
SMC5-203ENST00000475540 RETREG2Q8NC44 543 aa12.32□□□□□ -0.44
SMC5-203ENST00000475540 IFT43Q96FT9 208 aa12.32□□□□□ -0.44
SMC5-203ENST00000475540 STRN4Q9NRL3 753 aa12.32□□□□□ -0.44
SMC5-203ENST00000475540 PRR12Q9ULL5 1215 aa12.32□□□□□ -0.44
SMC5-203ENST00000475540 SFSWAPQ12872 951 aaKnown RBP12.31□□□□□ -0.44
SMC5-203ENST00000475540 SAP130Q9H0E3 1048 aa12.31□□□□□ -0.44
SMC5-203ENST00000475540 KCNH4Q9UQ05 1017 aa12.31□□□□□ -0.44
SMC5-203ENST00000475540 FAM181BA6NEQ2 426 aa12.3□□□□□ -0.44
SMC5-203ENST00000475540 BRD2P25440 801 aaKnown RBP12.3□□□□□ -0.44
SMC5-203ENST00000475540 SVOPQ8N4V2 548 aa12.3□□□□□ -0.44
SMC5-203ENST00000475540 OXCT2Q9BYC2 517 aaPredicted RBP12.3□□□□□ -0.44
SMC5-203ENST00000475540 DMGDHQ9UI17 866 aaKnown RBP12.3□□□□□ -0.44
SMC5-203ENST00000475540 HCN2Q9UL51 889 aa12.3□□□□□ -0.44
SMC5-203ENST00000475540 MICAL2O94851 1124 aa12.29□□□□□ -0.44
SMC5-203ENST00000475540 B4GALNT3Q6L9W6 998 aa12.29□□□□□ -0.44
SMC5-203ENST00000475540 LYPD4Q6UWN0 246 aa12.29□□□□□ -0.44
SMC5-203ENST00000475540 WHAMMQ8TF30 809 aa12.29□□□□□ -0.44
SMC5-203ENST00000475540 ACDQ96AP0 544 aa12.29□□□□□ -0.44
SMC5-203ENST00000475540 IDH3AP50213 366 aa12.28□□□□□ -0.44
SMC5-203ENST00000475540 KCNQ4P56696 695 aa12.28□□□□□ -0.44
SMC5-203ENST00000475540 MAP3K10Q02779 954 aa12.28□□□□□ -0.44
SMC5-203ENST00000475540 ZNF385CQ66K41 422 aaPredicted RBP12.28□□□□□ -0.44
SMC5-203ENST00000475540 STK17AQ9UEE5 414 aa12.28□□□□□ -0.44
SMC5-203ENST00000475540 SEPT3Q9UH03 358 aa12.28□□□□□ -0.44
SMC5-203ENST00000475540 GDF2Q9UK05 429 aaPredicted RBP12.28□□□□□ -0.44
SMC5-203ENST00000475540 CELA2BP08218 269 aaPredicted RBP12.27□□□□□ -0.45
SMC5-203ENST00000475540 BCRP11274 1271 aa12.27□□□□□ -0.45
SMC5-203ENST00000475540 EPB42P16452 691 aa12.27□□□□□ -0.45
SMC5-203ENST00000475540 GOLGA6L1Q8N7Z2 621 aa12.27□□□□□ -0.45
SMC5-203ENST00000475540 MTMR7Q9Y216 660 aa12.27□□□□□ -0.45
SMC5-203ENST00000475540 ARAFP10398 606 aa12.26□□□□□ -0.45
SMC5-203ENST00000475540 ENAMQ9NRM1 1142 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms