RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 CNKSR1Q969H4 720 aa19.36■□□□□ 0.69
ATG9A-220ENST00000475339 SLX4Q8IY92 1834 aa19.35■□□□□ 0.69
ATG9A-220ENST00000475339 COL11A2P13942 1736 aaPredicted RBP19.35■□□□□ 0.69
ATG9A-220ENST00000475339 AOC2O75106 756 aa19.35■□□□□ 0.69
ATG9A-220ENST00000475339 SOGA3Q5TF21 947 aa19.35■□□□□ 0.69
ATG9A-220ENST00000475339 TBC1D9BQ66K14 1250 aa19.35■□□□□ 0.69
ATG9A-220ENST00000475339 CANXP27824 592 aaKnown RBP19.33■□□□□ 0.68
ATG9A-220ENST00000475339 PRPF38BQ5VTL8 546 aaKnown RBP19.33■□□□□ 0.68
ATG9A-220ENST00000475339 ZNF277Q9NRM2 450 aaPredicted RBP19.33■□□□□ 0.68
ATG9A-220ENST00000475339 LTBP1Q14766 1721 aa19.33■□□□□ 0.68
ATG9A-220ENST00000475339 MAP2K2P36507 400 aa19.32■□□□□ 0.68
ATG9A-220ENST00000475339 SOX10P56693 466 aa19.32■□□□□ 0.68
ATG9A-220ENST00000475339 STYK1Q6J9G0 422 aa19.32■□□□□ 0.68
ATG9A-220ENST00000475339 SRGNP10124 158 aa19.31■□□□□ 0.68
ATG9A-220ENST00000475339 SLC39A6Q13433 755 aa19.31■□□□□ 0.68
ATG9A-220ENST00000475339 CST9Q5W186 159 aa19.31■□□□□ 0.68
ATG9A-220ENST00000475339 C7orf43Q8WVR3 580 aa19.31■□□□□ 0.68
ATG9A-220ENST00000475339 CA12O43570 354 aa19.3■□□□□ 0.68
ATG9A-220ENST00000475339 TNNT2P45379 298 aaPredicted RBP19.3■□□□□ 0.68
ATG9A-220ENST00000475339 AEBP1Q8IUX7 1158 aa19.3■□□□□ 0.68
ATG9A-220ENST00000475339 TRAF5O00463 557 aa19.29■□□□□ 0.68
ATG9A-220ENST00000475339 CCDC93Q567U6 631 aa19.29■□□□□ 0.68
ATG9A-220ENST00000475339 MASTLQ96GX5 879 aa19.29■□□□□ 0.68
ATG9A-220ENST00000475339 TLL2Q9Y6L7 1015 aa19.29■□□□□ 0.68
ATG9A-220ENST00000475339 FKBP4Q02790 459 aaKnown RBP eCLIP19.28■□□□□ 0.68
ATG9A-220ENST00000475339 CACNA1SQ13698 1873 aa19.28■□□□□ 0.68
ATG9A-220ENST00000475339 FZD9O00144 591 aa19.27■□□□□ 0.68
ATG9A-220ENST00000475339 NPHP1O15259 732 aa19.27■□□□□ 0.68
ATG9A-220ENST00000475339 EIF5P55010 431 aaKnown RBP19.27■□□□□ 0.68
ATG9A-220ENST00000475339 OLFM4Q6UX06 510 aa19.27■□□□□ 0.68
ATG9A-220ENST00000475339 GPC2Q8N158 579 aa19.27■□□□□ 0.68
ATG9A-220ENST00000475339 CNBD1Q8NA66 436 aa19.27■□□□□ 0.68
ATG9A-220ENST00000475339 SLC52A2Q9HAB3 445 aa19.27■□□□□ 0.68
ATG9A-220ENST00000475339 LGR6Q9HBX8 967 aa19.26■□□□□ 0.67
ATG9A-220ENST00000475339 A0A087WZG4 1122 aa19.25■□□□□ 0.67
ATG9A-220ENST00000475339 TBC1D2BQ9UPU7 963 aa19.25■□□□□ 0.67
ATG9A-220ENST00000475339 BRPF1P55201 1214 aaPredicted RBP19.24■□□□□ 0.67
ATG9A-220ENST00000475339 ST5P78524 1137 aa19.24■□□□□ 0.67
ATG9A-220ENST00000475339 SETDB2Q96T68 719 aa19.24■□□□□ 0.67
ATG9A-220ENST00000475339 IARSP41252 1262 aaKnown RBP19.23■□□□□ 0.67
ATG9A-220ENST00000475339 CIAPIN1Q6FI81 312 aa19.23■□□□□ 0.67
ATG9A-220ENST00000475339 SAPCD2Q86UD0 394 aa19.23■□□□□ 0.67
ATG9A-220ENST00000475339 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
ATG9A-220ENST00000475339 GJA3Q9Y6H8 435 aa19.23■□□□□ 0.67
ATG9A-220ENST00000475339 SCN11AQ9UI33 1791 aa19.22■□□□□ 0.67
ATG9A-220ENST00000475339 EPS15P42566 896 aa19.22■□□□□ 0.67
ATG9A-220ENST00000475339 VSIG10Q8N0Z9 540 aa19.22■□□□□ 0.67
ATG9A-220ENST00000475339 LMOD1P29536 600 aaPredicted RBP19.21■□□□□ 0.67
ATG9A-220ENST00000475339 CDCA8Q53HL2 280 aa19.21■□□□□ 0.67
ATG9A-220ENST00000475339 RTKN2Q8IZC4 609 aa19.21■□□□□ 0.67
ATG9A-220ENST00000475339 SYNE4Q8N205 404 aa19.21■□□□□ 0.67
ATG9A-220ENST00000475339 ARFGEF2Q9Y6D5 1785 aa19.21■□□□□ 0.67
ATG9A-220ENST00000475339 STARD3NLO95772 234 aa19.2■□□□□ 0.66
ATG9A-220ENST00000475339 SULT6B1Q6IMI4 303 aa19.2■□□□□ 0.66
ATG9A-220ENST00000475339 CELF2O95319 508 aaKnown RBP19.19■□□□□ 0.66
ATG9A-220ENST00000475339 NPR1P16066 1061 aa19.19■□□□□ 0.66
ATG9A-220ENST00000475339 SCNN1DP51172 638 aa19.19■□□□□ 0.66
ATG9A-220ENST00000475339 AKAP4Q5JQC9 854 aa19.19■□□□□ 0.66
ATG9A-220ENST00000475339 JDP2Q8WYK2 163 aa19.19■□□□□ 0.66
ATG9A-220ENST00000475339 ZIC5Q96T25 663 aa19.19■□□□□ 0.66
ATG9A-220ENST00000475339 TRPM7Q96QT4 1865 aa19.19■□□□□ 0.66
ATG9A-220ENST00000475339 RNMTO43148 476 aaKnown RBP19.18■□□□□ 0.66
ATG9A-220ENST00000475339 EIF6P56537 245 aaKnown RBP19.17■□□□□ 0.66
ATG9A-220ENST00000475339 USP50Q70EL3 339 aaPredicted RBP19.17■□□□□ 0.66
ATG9A-220ENST00000475339 CAMTA2O94983 1202 aa19.16■□□□□ 0.66
ATG9A-220ENST00000475339 HHIPL1Q96JK4 782 aa19.16■□□□□ 0.66
ATG9A-220ENST00000475339 SCN7AQ01118 1682 aa19.16■□□□□ 0.66
ATG9A-220ENST00000475339 EIF4G2P78344 907 aaKnown RBP eCLIP19.15■□□□□ 0.66
ATG9A-220ENST00000475339 MRC1P22897 1456 aa19.15■□□□□ 0.66
ATG9A-220ENST00000475339 NBPF5PQ86XG9 351 aaPredicted RBP19.14■□□□□ 0.65
ATG9A-220ENST00000475339 COL4A5P29400 1685 aa19.14■□□□□ 0.65
ATG9A-220ENST00000475339 KLRG2A4D1S0 409 aaPredicted RBP19.13■□□□□ 0.65
ATG9A-220ENST00000475339 IL6STP40189 918 aaPredicted RBP19.13■□□□□ 0.65
ATG9A-220ENST00000475339 GLIS2Q9BZE0 524 aaPredicted RBP19.13■□□□□ 0.65
ATG9A-220ENST00000475339 ZNF408Q9H9D4 720 aa19.13■□□□□ 0.65
ATG9A-220ENST00000475339 NOGQ13253 232 aa19.12■□□□□ 0.65
ATG9A-220ENST00000475339 PSMD1Q99460 953 aa19.12■□□□□ 0.65
ATG9A-220ENST00000475339 A1BGP04217 495 aa19.11■□□□□ 0.65
ATG9A-220ENST00000475339 TTC5Q8N0Z6 440 aa19.11■□□□□ 0.65
ATG9A-220ENST00000475339 ZNF496Q96IT1 587 aaPredicted RBP19.11■□□□□ 0.65
ATG9A-220ENST00000475339 NPM2Q86SE8 214 aaKnown RBP19.1■□□□□ 0.65
ATG9A-220ENST00000475339 SNED1Q8TER0 1413 aa19.09■□□□□ 0.65
ATG9A-220ENST00000475339 HSPA5P11021 654 aaKnown RBP19.09■□□□□ 0.65
ATG9A-220ENST00000475339 ALDH1B1P30837 517 aa19.09■□□□□ 0.65
ATG9A-220ENST00000475339 NBPF15Q8N660 670 aa19.09■□□□□ 0.65
ATG9A-220ENST00000475339 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
ATG9A-220ENST00000475339 HABP4Q5JVS0 413 aaKnown RBP19.08■□□□□ 0.64
ATG9A-220ENST00000475339 DZIP3Q86Y13 1208 aaKnown RBP19.08■□□□□ 0.64
ATG9A-220ENST00000475339 LARGE2Q8N3Y3 721 aa19.08■□□□□ 0.64
ATG9A-220ENST00000475339 TEX13AQ9BXU3 409 aaPredicted RBP19.08■□□□□ 0.64
ATG9A-220ENST00000475339 ADARB2Q9NS39 739 aaKnown RBP19.08■□□□□ 0.64
ATG9A-220ENST00000475339 GPRC5DQ9NZD1 345 aa19.08■□□□□ 0.64
ATG9A-220ENST00000475339 BCORQ6W2J9 1755 aa19.07■□□□□ 0.64
ATG9A-220ENST00000475339 UBR2Q8IWV8 1755 aa19.07■□□□□ 0.64
ATG9A-220ENST00000475339 IL13P35225 146 aa19.07■□□□□ 0.64
ATG9A-220ENST00000475339 HEG1Q9ULI3 1381 aa19.06■□□□□ 0.64
ATG9A-220ENST00000475339 TRPA1O75762 1119 aa19.06■□□□□ 0.64
ATG9A-220ENST00000475339 HUNKP57058 714 aa19.06■□□□□ 0.64
ATG9A-220ENST00000475339 TPTE2Q6XPS3 522 aa19.06■□□□□ 0.64
ATG9A-220ENST00000475339 POLR3GLQ9BT43 218 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms