RNA–Protein interactions for RNA: ENST00000475283.2

SUSD1-206, Transcript of sushi domain containing 1, humanhuman

TSL 3

Gene SUSD1, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-206ENST00000475283 NFKBIEO00221 500 aa18.48■□□□□ 0.55
SUSD1-206ENST00000475283 C21orf2O43822 256 aa18.48■□□□□ 0.55
SUSD1-206ENST00000475283 NFE2L2Q16236 605 aa18.48■□□□□ 0.55
SUSD1-206ENST00000475283 DPY19L2Q6NUT2 758 aa18.48■□□□□ 0.55
SUSD1-206ENST00000475283 NBPF10Q6P3W6 841 aaKnown RBP18.48■□□□□ 0.55
SUSD1-206ENST00000475283 NBPF15Q8N660 670 aa18.48■□□□□ 0.55
SUSD1-206ENST00000475283 MASTLQ96GX5 879 aa18.48■□□□□ 0.55
SUSD1-206ENST00000475283 MAPK8IP3Q9UPT6 1336 aa18.48■□□□□ 0.55
SUSD1-206ENST00000475283 SRGNP10124 158 aa18.47■□□□□ 0.55
SUSD1-206ENST00000475283 SOGA3Q5TF21 947 aa18.47■□□□□ 0.55
SUSD1-206ENST00000475283 ZNF219Q9P2Y4 722 aaPredicted RBP18.47■□□□□ 0.55
SUSD1-206ENST00000475283 VEGFAP15692 232 aaPredicted RBP18.46■□□□□ 0.55
SUSD1-206ENST00000475283 PRELPP51888 382 aa18.46■□□□□ 0.55
SUSD1-206ENST00000475283 RALBP1Q15311 655 aa18.46■□□□□ 0.55
SUSD1-206ENST00000475283 NIP7Q9Y221 180 aaKnown RBP eCLIP18.46■□□□□ 0.55
SUSD1-206ENST00000475283 ANKRD31Q8N7Z5 1873 aa18.44■□□□□ 0.54
SUSD1-206ENST00000475283 EIF4A1P60842 406 aaKnown RBP18.44■□□□□ 0.54
SUSD1-206ENST00000475283 SMC1BQ8NDV3 1235 aa18.44■□□□□ 0.54
SUSD1-206ENST00000475283 LTBP3Q9NS15 1303 aa18.44■□□□□ 0.54
SUSD1-206ENST00000475283 ERVV-1B6SEH8 477 aa18.43■□□□□ 0.54
SUSD1-206ENST00000475283 NPR1P16066 1061 aa18.43■□□□□ 0.54
SUSD1-206ENST00000475283 GTF2E1P29083 439 aaPredicted RBP18.43■□□□□ 0.54
SUSD1-206ENST00000475283 ERFEQ4G0M1 354 aa18.43■□□□□ 0.54
SUSD1-206ENST00000475283 PRPF40BQ6NWY9 871 aaKnown RBP18.43■□□□□ 0.54
SUSD1-206ENST00000475283 TAOK3Q9H2K8 898 aa18.43■□□□□ 0.54
SUSD1-206ENST00000475283 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
SUSD1-206ENST00000475283 KLRG2A4D1S0 409 aaPredicted RBP18.42■□□□□ 0.54
SUSD1-206ENST00000475283 HLFQ16534 295 aa18.42■□□□□ 0.54
SUSD1-206ENST00000475283 DNAJC5GQ8N7S2 189 aa18.42■□□□□ 0.54
SUSD1-206ENST00000475283 TNRC6CQ9HCJ0 1690 aaKnown RBP18.41■□□□□ 0.54
SUSD1-206ENST00000475283 NGEFQ8N5V2 710 aa18.41■□□□□ 0.54
SUSD1-206ENST00000475283 THUMPD2Q9BTF0 503 aaKnown RBP18.41■□□□□ 0.54
SUSD1-206ENST00000475283 RRP7AQ9Y3A4 280 aaKnown RBP18.41■□□□□ 0.54
SUSD1-206ENST00000475283 KIF6Q6ZMV9 814 aa18.4■□□□□ 0.54
SUSD1-206ENST00000475283 NYXQ9GZU5 481 aa18.4■□□□□ 0.54
SUSD1-206ENST00000475283 CEP350Q5VT06 3117 aa18.39■□□□□ 0.53
SUSD1-206ENST00000475283 FAM177BA6PVY3 158 aa18.39■□□□□ 0.53
SUSD1-206ENST00000475283 ALDH1B1P30837 517 aa18.39■□□□□ 0.53
SUSD1-206ENST00000475283 RIPK4P57078 832 aa18.39■□□□□ 0.53
SUSD1-206ENST00000475283 C7orf43Q8WVR3 580 aa18.39■□□□□ 0.53
SUSD1-206ENST00000475283 BABAM1Q9NWV8 329 aa18.39■□□□□ 0.53
SUSD1-206ENST00000475283 MAP3K15Q6ZN16 1313 aa18.39■□□□□ 0.53
SUSD1-206ENST00000475283 MYL6BP14649 208 aa18.38■□□□□ 0.53
SUSD1-206ENST00000475283 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
SUSD1-206ENST00000475283 CCDC93Q567U6 631 aa18.38■□□□□ 0.53
SUSD1-206ENST00000475283 TSPYL4Q9UJ04 414 aa18.38■□□□□ 0.53
SUSD1-206ENST00000475283 DLG5Q8TDM6 1919 aa18.38■□□□□ 0.53
SUSD1-206ENST00000475283 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
SUSD1-206ENST00000475283 COL11A2P13942 1736 aaPredicted RBP18.37■□□□□ 0.53
SUSD1-206ENST00000475283 CCDC88AQ3V6T2 1871 aa18.37■□□□□ 0.53
SUSD1-206ENST00000475283 SLX4Q8IY92 1834 aa18.37■□□□□ 0.53
SUSD1-206ENST00000475283 FER1L6Q2WGJ9 1857 aa18.37■□□□□ 0.53
SUSD1-206ENST00000475283 POTECB2RU33 542 aa18.36■□□□□ 0.53
SUSD1-206ENST00000475283 DDX10Q13206 875 aaKnown RBP18.36■□□□□ 0.53
SUSD1-206ENST00000475283 RTKN2Q8IZC4 609 aa18.36■□□□□ 0.53
SUSD1-206ENST00000475283 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
SUSD1-206ENST00000475283 MYBBP1AQ9BQG0 1328 aaKnown RBP18.35■□□□□ 0.53
SUSD1-206ENST00000475283 TMPOP42166 694 aaKnown RBP18.35■□□□□ 0.53
SUSD1-206ENST00000475283 IFFO2Q5TF58 517 aa18.35■□□□□ 0.53
SUSD1-206ENST00000475283 TTLL7Q6ZT98 887 aa18.35■□□□□ 0.53
SUSD1-206ENST00000475283 KLRG1Q96E93 195 aa18.35■□□□□ 0.53
SUSD1-206ENST00000475283 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
SUSD1-206ENST00000475283 FKBP4Q02790 459 aaKnown RBP eCLIP18.34■□□□□ 0.53
SUSD1-206ENST00000475283 ZBTB3Q9H5J0 574 aa18.34■□□□□ 0.53
SUSD1-206ENST00000475283 TIAM2Q8IVF5 1701 aa18.33■□□□□ 0.52
SUSD1-206ENST00000475283 DDNO94850 711 aaPredicted RBP18.33■□□□□ 0.52
SUSD1-206ENST00000475283 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
SUSD1-206ENST00000475283 HTRA3P83110 453 aa18.33■□□□□ 0.52
SUSD1-206ENST00000475283 CRY2Q49AN0 593 aa18.33■□□□□ 0.52
SUSD1-206ENST00000475283 GIGYF2Q6Y7W6 1299 aaKnown RBP18.33■□□□□ 0.52
SUSD1-206ENST00000475283 NUTM1Q86Y26 1132 aa18.33■□□□□ 0.52
SUSD1-206ENST00000475283 DICER1Q9UPY3 1922 aaKnown RBP18.33■□□□□ 0.52
SUSD1-206ENST00000475283 GPTP24298 496 aa18.32■□□□□ 0.52
SUSD1-206ENST00000475283 PARP10Q53GL7 1025 aa18.32■□□□□ 0.52
SUSD1-206ENST00000475283 CC2D2BQ6DHV5 1058 aa18.32■□□□□ 0.52
SUSD1-206ENST00000475283 PPP1R42Q7Z4L9 355 aa18.32■□□□□ 0.52
SUSD1-206ENST00000475283 ZNF34Q8IZ26 560 aa18.32■□□□□ 0.52
SUSD1-206ENST00000475283 ARFGEF2Q9Y6D5 1785 aa18.32■□□□□ 0.52
SUSD1-206ENST00000475283 WDR90Q96KV7 1748 aa18.32■□□□□ 0.52
SUSD1-206ENST00000475283 IBTKQ9P2D0 1353 aaPredicted RBP18.31■□□□□ 0.52
SUSD1-206ENST00000475283 IQCA1LA6NCM1 817 aa18.31■□□□□ 0.52
SUSD1-206ENST00000475283 SUSD4Q5VX71 490 aa18.31■□□□□ 0.52
SUSD1-206ENST00000475283 RPGRQ92834 1020 aaKnown RBP18.31■□□□□ 0.52
SUSD1-206ENST00000475283 WDR43Q15061 677 aaKnown RBP eCLIP18.3■□□□□ 0.52
SUSD1-206ENST00000475283 PDIA6Q15084 440 aa18.3■□□□□ 0.52
SUSD1-206ENST00000475283 GRIPAP1Q4V328 841 aa18.3■□□□□ 0.52
SUSD1-206ENST00000475283 JMYQ8N9B5 988 aa18.3■□□□□ 0.52
SUSD1-206ENST00000475283 RUNDC1Q96C34 613 aa18.3■□□□□ 0.52
SUSD1-206ENST00000475283 ZNF277Q9NRM2 450 aaPredicted RBP18.3■□□□□ 0.52
SUSD1-206ENST00000475283 UBN2Q6ZU65 1347 aa18.29■□□□□ 0.52
SUSD1-206ENST00000475283 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
SUSD1-206ENST00000475283 HOXA10P31260 410 aaPredicted RBP18.29■□□□□ 0.52
SUSD1-206ENST00000475283 NEUROD2Q15784 382 aa18.29■□□□□ 0.52
SUSD1-206ENST00000475283 SYNE4Q8N205 404 aa18.29■□□□□ 0.52
SUSD1-206ENST00000475283 RBM17Q96I25 401 aaKnown RBP18.29■□□□□ 0.52
SUSD1-206ENST00000475283 NUP98P52948 1817 aa18.28■□□□□ 0.52
SUSD1-206ENST00000475283 IARSP41252 1262 aaKnown RBP18.28■□□□□ 0.52
SUSD1-206ENST00000475283 CHADLQ6NUI6 762 aa18.28■□□□□ 0.52
SUSD1-206ENST00000475283 OLFM4Q6UX06 510 aa18.28■□□□□ 0.52
SUSD1-206ENST00000475283 LRP10Q7Z4F1 713 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms