RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 BRCA1P38398 1863 aaKnown RBP17.07■□□□□ 0.32
BRAT1-205ENST00000473879 AFDNP55196 1824 aaKnown RBP17.07■□□□□ 0.32
BRAT1-205ENST00000473879 N4BP2Q86UW6 1770 aaPredicted RBP17.07■□□□□ 0.32
BRAT1-205ENST00000473879 PXDNLA1KZ92 1463 aa17.06■□□□□ 0.32
BRAT1-205ENST00000473879 NBPF26B4DH59 902 aa17.06■□□□□ 0.32
BRAT1-205ENST00000473879 HOXB7P09629 217 aa17.06■□□□□ 0.32
BRAT1-205ENST00000473879 NBPF10Q6P3W6 841 aaKnown RBP17.06■□□□□ 0.32
BRAT1-205ENST00000473879 DZIP3Q86Y13 1208 aaKnown RBP17.06■□□□□ 0.32
BRAT1-205ENST00000473879 NBPF15Q8N660 670 aa17.06■□□□□ 0.32
BRAT1-205ENST00000473879 ERBB4Q15303 1308 aa17.05■□□□□ 0.32
BRAT1-205ENST00000473879 CAMTA2O94983 1202 aa17.05■□□□□ 0.32
BRAT1-205ENST00000473879 PIP4K2AP48426 406 aaPredicted RBP17.05■□□□□ 0.32
BRAT1-205ENST00000473879 A0A0G2JLW4 131 aa17.04■□□□□ 0.32
BRAT1-205ENST00000473879 SERPINB2P05120 415 aa17.04■□□□□ 0.32
BRAT1-205ENST00000473879 EXOSC9Q06265 439 aaKnown RBP17.04■□□□□ 0.32
BRAT1-205ENST00000473879 RGL2O15211 777 aa17.03■□□□□ 0.32
BRAT1-205ENST00000473879 TBC1D9BQ66K14 1250 aa17.03■□□□□ 0.32
BRAT1-205ENST00000473879 CLEC4GQ6UXB4 293 aa17.03■□□□□ 0.32
BRAT1-205ENST00000473879 DPEP1P16444 411 aa17.02■□□□□ 0.32
BRAT1-205ENST00000473879 PDIA6Q15084 440 aa17.02■□□□□ 0.32
BRAT1-205ENST00000473879 KRT24Q2M2I5 525 aa17.02■□□□□ 0.32
BRAT1-205ENST00000473879 BICDL1Q6ZP65 573 aa17.02■□□□□ 0.32
BRAT1-205ENST00000473879 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
BRAT1-205ENST00000473879 SUPT16HQ9Y5B9 1047 aaKnown RBP17.02■□□□□ 0.32
BRAT1-205ENST00000473879 KCNA3P22001 575 aa17.01■□□□□ 0.31
BRAT1-205ENST00000473879 DLEC1Q9Y238 1755 aa17.01■□□□□ 0.31
BRAT1-205ENST00000473879 NEFLP07196 543 aa17■□□□□ 0.31
BRAT1-205ENST00000473879 SETDB2Q96T68 719 aa17■□□□□ 0.31
BRAT1-205ENST00000473879 WWC3Q9ULE0 1092 aa17■□□□□ 0.31
BRAT1-205ENST00000473879 ZNF652Q9Y2D9 606 aa17■□□□□ 0.31
BRAT1-205ENST00000473879 CARMIL3Q8ND23 1372 aa17■□□□□ 0.31
BRAT1-205ENST00000473879 TWISTNBQ3B726 338 aaPredicted RBP16.99■□□□□ 0.31
BRAT1-205ENST00000473879 RNF123Q5XPI4 1314 aa16.98■□□□□ 0.31
BRAT1-205ENST00000473879 ARFGEF1Q9Y6D6 1849 aa16.98■□□□□ 0.31
BRAT1-205ENST00000473879 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-205ENST00000473879 PIM2Q9P1W9 311 aa16.98■□□□□ 0.31
BRAT1-205ENST00000473879 ERVV-1B6SEH8 477 aa16.97■□□□□ 0.31
BRAT1-205ENST00000473879 MYL6BP14649 208 aa16.97■□□□□ 0.31
BRAT1-205ENST00000473879 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
BRAT1-205ENST00000473879 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
BRAT1-205ENST00000473879 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
BRAT1-205ENST00000473879 BCS1LQ9Y276 419 aa16.97■□□□□ 0.31
BRAT1-205ENST00000473879 ANKRD31Q8N7Z5 1873 aa16.97■□□□□ 0.31
BRAT1-205ENST00000473879 CHRNA5P30532 468 aa16.96■□□□□ 0.31
BRAT1-205ENST00000473879 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.31
BRAT1-205ENST00000473879 ALDH1L2Q3SY69 923 aa16.96■□□□□ 0.31
BRAT1-205ENST00000473879 PRR5LQ6MZQ0 368 aa16.96■□□□□ 0.31
BRAT1-205ENST00000473879 BRIP1Q9BX63 1249 aa16.96■□□□□ 0.31
BRAT1-205ENST00000473879 CHMP4AQ9BY43 222 aa16.96■□□□□ 0.31
BRAT1-205ENST00000473879 NUP98P52948 1817 aa16.96■□□□□ 0.3
BRAT1-205ENST00000473879 MAP3K15Q6ZN16 1313 aa16.96■□□□□ 0.3
BRAT1-205ENST00000473879 VAMP4O75379 141 aa16.95■□□□□ 0.3
BRAT1-205ENST00000473879 HLFQ16534 295 aa16.95■□□□□ 0.3
BRAT1-205ENST00000473879 PROSER3Q2NL68 480 aa16.95■□□□□ 0.3
BRAT1-205ENST00000473879 DALRD3Q5D0E6 543 aaKnown RBP16.95■□□□□ 0.3
BRAT1-205ENST00000473879 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
BRAT1-205ENST00000473879 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
BRAT1-205ENST00000473879 PDZRN3Q9UPQ7 1066 aa16.95■□□□□ 0.3
BRAT1-205ENST00000473879 ATP10DQ9P241 1426 aa16.95■□□□□ 0.3
BRAT1-205ENST00000473879 CACNA1FO60840 1977 aa16.95■□□□□ 0.3
BRAT1-205ENST00000473879 ANKRD36CQ5JPF3 1778 aa16.94■□□□□ 0.3
BRAT1-205ENST00000473879 PDE6BP35913 854 aa16.94■□□□□ 0.3
BRAT1-205ENST00000473879 TTLL7Q6ZT98 887 aa16.94■□□□□ 0.3
BRAT1-205ENST00000473879 CNBD1Q8NA66 436 aa16.94■□□□□ 0.3
BRAT1-205ENST00000473879 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
BRAT1-205ENST00000473879 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
BRAT1-205ENST00000473879 NIP7Q9Y221 180 aaKnown RBP eCLIP16.94■□□□□ 0.3
BRAT1-205ENST00000473879 COL11A2P13942 1736 aaPredicted RBP16.93■□□□□ 0.3
BRAT1-205ENST00000473879 H0YIN7 160 aa16.93■□□□□ 0.3
BRAT1-205ENST00000473879 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
BRAT1-205ENST00000473879 ST5P78524 1137 aa16.93■□□□□ 0.3
BRAT1-205ENST00000473879 NBPF5PQ86XG9 351 aaPredicted RBP16.93■□□□□ 0.3
BRAT1-205ENST00000473879 C2CD5Q86YS7 1000 aa16.93■□□□□ 0.3
BRAT1-205ENST00000473879 ZNF784Q8NCA9 323 aaPredicted RBP16.93■□□□□ 0.3
BRAT1-205ENST00000473879 KIF16BQ96L93 1317 aa16.93■□□□□ 0.3
BRAT1-205ENST00000473879 NPHP1O15259 732 aa16.92■□□□□ 0.3
BRAT1-205ENST00000473879 HDGFL1Q5TGJ6 251 aa16.92■□□□□ 0.3
BRAT1-205ENST00000473879 TPTE2Q6XPS3 522 aa16.92■□□□□ 0.3
BRAT1-205ENST00000473879 ARFGEF2Q9Y6D5 1785 aa16.92■□□□□ 0.3
BRAT1-205ENST00000473879 BCAR3O75815 825 aa16.91■□□□□ 0.3
BRAT1-205ENST00000473879 GIGYF2Q6Y7W6 1299 aaKnown RBP16.91■□□□□ 0.3
BRAT1-205ENST00000473879 SSH1Q8WYL5 1049 aa16.91■□□□□ 0.3
BRAT1-205ENST00000473879 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
BRAT1-205ENST00000473879 ZBTB3Q9H5J0 574 aa16.91■□□□□ 0.3
BRAT1-205ENST00000473879 CHPF2Q9P2E5 772 aa16.91■□□□□ 0.3
BRAT1-205ENST00000473879 ANXA1P04083 346 aa16.9■□□□□ 0.3
BRAT1-205ENST00000473879 BRPF1P55201 1214 aaPredicted RBP16.9■□□□□ 0.3
BRAT1-205ENST00000473879 ARHGAP27Q6ZUM4 889 aa16.9■□□□□ 0.3
BRAT1-205ENST00000473879 CCDC24Q8N4L8 307 aa16.9■□□□□ 0.3
BRAT1-205ENST00000473879 TTLL6Q8N841 843 aa16.9■□□□□ 0.3
BRAT1-205ENST00000473879 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
BRAT1-205ENST00000473879 DBF4Q9UBU7 674 aaPredicted RBP16.9■□□□□ 0.3
BRAT1-205ENST00000473879 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
BRAT1-205ENST00000473879 COPS6Q7L5N1 327 aa16.89■□□□□ 0.29
BRAT1-205ENST00000473879 ZNF34Q8IZ26 560 aa16.89■□□□□ 0.29
BRAT1-205ENST00000473879 STK31Q9BXU1 1019 aa16.89■□□□□ 0.29
BRAT1-205ENST00000473879 NYXQ9GZU5 481 aa16.89■□□□□ 0.29
BRAT1-205ENST00000473879 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.29
BRAT1-205ENST00000473879 XAGE3Q8WTP9 111 aa16.88■□□□□ 0.29
BRAT1-205ENST00000473879 CACNA1SQ13698 1873 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms