RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 EIF4A1P60842 406 aaKnown RBP16.78■□□□□ 0.28
ABCF3-210ENST00000473311 LGR6Q9HBX8 967 aa16.78■□□□□ 0.28
ABCF3-210ENST00000473311 MARF1Q9Y4F3 1742 aaKnown RBP16.78■□□□□ 0.28
ABCF3-210ENST00000473311 BEND3Q5T5X7 828 aa16.78■□□□□ 0.28
ABCF3-210ENST00000473311 TTC14Q96N46 770 aa16.78■□□□□ 0.28
ABCF3-210ENST00000473311 HSP90AB4PQ58FF6 505 aa16.78■□□□□ 0.28
ABCF3-210ENST00000473311 CNPY2Q9Y2B0 182 aa16.78■□□□□ 0.28
ABCF3-210ENST00000473311 ZNF830Q96NB3 372 aaPredicted RBP16.77■□□□□ 0.28
ABCF3-210ENST00000473311 LIMCH1Q9UPQ0 1083 aa16.77■□□□□ 0.28
ABCF3-210ENST00000473311 ZBTB7CA1YPR0 619 aa16.77■□□□□ 0.27
ABCF3-210ENST00000473311 ZSCAN22P10073 491 aaPredicted RBP16.77■□□□□ 0.27
ABCF3-210ENST00000473311 DIAPH3Q9NSV4 1193 aa16.77■□□□□ 0.27
ABCF3-210ENST00000473311 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.77■□□□□ 0.27
ABCF3-210ENST00000473311 ANKARQ7Z5J8 1434 aa16.77■□□□□ 0.27
ABCF3-210ENST00000473311 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.27
ABCF3-210ENST00000473311 SLIT1O75093 1534 aa16.77■□□□□ 0.27
ABCF3-210ENST00000473311 RUFY3Q7L099 469 aa16.76■□□□□ 0.27
ABCF3-210ENST00000473311 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
ABCF3-210ENST00000473311 KCNQ3O43525 872 aa16.76■□□□□ 0.27
ABCF3-210ENST00000473311 STX6O43752 255 aa16.76■□□□□ 0.27
ABCF3-210ENST00000473311 CPA1P15085 419 aa16.76■□□□□ 0.27
ABCF3-210ENST00000473311 KCNA6P17658 529 aa16.76■□□□□ 0.27
ABCF3-210ENST00000473311 CASTP20810 708 aaKnown RBP16.76■□□□□ 0.27
ABCF3-210ENST00000473311 TEFQ10587 303 aa16.76■□□□□ 0.27
ABCF3-210ENST00000473311 ARHGAP23Q9P227 1491 aa16.76■□□□□ 0.27
ABCF3-210ENST00000473311 GLRX3O76003 335 aaKnown RBP16.75■□□□□ 0.27
ABCF3-210ENST00000473311 SYT1P21579 422 aa16.75■□□□□ 0.27
ABCF3-210ENST00000473311 HOXB7P09629 217 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 CCDC183Q5T5S1 534 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 NBPF6Q5VWK0 638 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 CLASRPQ8N2M8 674 aaKnown RBP16.74■□□□□ 0.27
ABCF3-210ENST00000473311 TMEM87AQ8NBN3 555 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 NBPF4Q96M43 638 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 CHMP4AQ9BY43 222 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 TTC41PQ6P2S7 1318 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 LTN1O94822 1766 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 THEMISQ8N1K5 641 aaPredicted RBP16.74■□□□□ 0.27
ABCF3-210ENST00000473311 PLCD3Q8N3E9 789 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 ARID3AQ99856 593 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 BTBD11A6QL63 1104 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 FIBPO43427 364 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 FAM184AQ8NB25 1140 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 RUFY2Q8WXA3 655 aa16.74■□□□□ 0.27
ABCF3-210ENST00000473311 HMGN5P82970 282 aaKnown RBP16.73■□□□□ 0.27
ABCF3-210ENST00000473311 IP6K1Q92551 441 aa16.73■□□□□ 0.27
ABCF3-210ENST00000473311 C9orf78Q9NZ63 289 aaPredicted RBP16.73■□□□□ 0.27
ABCF3-210ENST00000473311 LARGE1O95461 756 aa16.73■□□□□ 0.27
ABCF3-210ENST00000473311 F13A1P00488 732 aa16.73■□□□□ 0.27
ABCF3-210ENST00000473311 CCDC83Q8IWF9 413 aa16.73■□□□□ 0.27
ABCF3-210ENST00000473311 ADCY9O60503 1353 aa16.72■□□□□ 0.27
ABCF3-210ENST00000473311 VGLL3A8MV65 326 aa16.72■□□□□ 0.27
ABCF3-210ENST00000473311 DTNBO60941 627 aa16.72■□□□□ 0.27
ABCF3-210ENST00000473311 UBE2HP62256 183 aa16.72■□□□□ 0.27
ABCF3-210ENST00000473311 JAKMIP1Q96N16 626 aaKnown RBP16.72■□□□□ 0.27
ABCF3-210ENST00000473311 ATP6V1DQ9Y5K8 247 aa16.72■□□□□ 0.27
ABCF3-210ENST00000473311 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
ABCF3-210ENST00000473311 PTH1RQ03431 593 aa16.72■□□□□ 0.27
ABCF3-210ENST00000473311 PRPF40BQ6NWY9 871 aaKnown RBP16.72■□□□□ 0.27
ABCF3-210ENST00000473311 ZNF530Q6P9A1 599 aaPredicted RBP16.72■□□□□ 0.27
ABCF3-210ENST00000473311 MPRIPQ6WCQ1 1025 aa16.72■□□□□ 0.27
ABCF3-210ENST00000473311 MPNDQ8N594 471 aa16.72■□□□□ 0.27
ABCF3-210ENST00000473311 PRIMPOLQ96LW4 560 aa16.72■□□□□ 0.27
ABCF3-210ENST00000473311 USP25Q9UHP3 1055 aa16.72■□□□□ 0.27
ABCF3-210ENST00000473311 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.72■□□□□ 0.27
ABCF3-210ENST00000473311 USP54Q70EL1 1684 aa16.71■□□□□ 0.27
ABCF3-210ENST00000473311 SLC20A2Q08357 652 aa16.71■□□□□ 0.27
ABCF3-210ENST00000473311 GPATCH3Q96I76 525 aa16.71■□□□□ 0.27
ABCF3-210ENST00000473311 ECHDC1Q9NTX5 307 aa16.71■□□□□ 0.27
ABCF3-210ENST00000473311 PA2G4Q9UQ80 394 aaKnown RBP16.71■□□□□ 0.27
ABCF3-210ENST00000473311 KDM3BQ7LBC6 1761 aa16.71■□□□□ 0.27
ABCF3-210ENST00000473311 IFIT2P09913 472 aaKnown RBP16.71■□□□□ 0.27
ABCF3-210ENST00000473311 GJB2P29033 226 aa16.71■□□□□ 0.27
ABCF3-210ENST00000473311 ADCK5Q3MIX3 580 aa16.71■□□□□ 0.27
ABCF3-210ENST00000473311 MYRIPQ8NFW9 859 aa16.71■□□□□ 0.27
ABCF3-210ENST00000473311 PDRG1Q9NUG6 133 aa16.71■□□□□ 0.27
ABCF3-210ENST00000473311 HYPKQ9NX55 129 aa16.71■□□□□ 0.27
ABCF3-210ENST00000473311 DBF4Q9UBU7 674 aaPredicted RBP16.71■□□□□ 0.27
ABCF3-210ENST00000473311 PHF8Q9UPP1 1060 aa16.71■□□□□ 0.27
ABCF3-210ENST00000473311 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.27
ABCF3-210ENST00000473311 HCLS1P14317 486 aaPredicted RBP16.7■□□□□ 0.26
ABCF3-210ENST00000473311 KIAA2012Q0VF49 1180 aa16.7■□□□□ 0.26
ABCF3-210ENST00000473311 UVSSAQ2YD98 709 aa16.7■□□□□ 0.26
ABCF3-210ENST00000473311 MAP3K2Q9Y2U5 619 aa16.7■□□□□ 0.26
ABCF3-210ENST00000473311 CRYBG1Q9Y4K1 1723 aa16.7■□□□□ 0.26
ABCF3-210ENST00000473311 CYP46A1Q9Y6A2 500 aa16.7■□□□□ 0.26
ABCF3-210ENST00000473311 MTX1Q13505 466 aa16.69■□□□□ 0.26
ABCF3-210ENST00000473311 DDX54Q8TDD1 881 aaKnown RBP16.69■□□□□ 0.26
ABCF3-210ENST00000473311 LRRC59Q96AG4 307 aaKnown RBP16.69■□□□□ 0.26
ABCF3-210ENST00000473311 AKAP4Q5JQC9 854 aa16.69■□□□□ 0.26
ABCF3-210ENST00000473311 DNTTIP2Q5QJE6 756 aaKnown RBP16.69■□□□□ 0.26
ABCF3-210ENST00000473311 KCNJ4P48050 445 aa16.69■□□□□ 0.26
ABCF3-210ENST00000473311 VPS53Q5VIR6 699 aa16.69■□□□□ 0.26
ABCF3-210ENST00000473311 VPS37CA5D8V6 355 aaPredicted RBP16.68■□□□□ 0.26
ABCF3-210ENST00000473311 CWF19L2Q2TBE0 894 aaKnown RBP16.68■□□□□ 0.26
ABCF3-210ENST00000473311 AACSQ86V21 672 aa16.68■□□□□ 0.26
ABCF3-210ENST00000473311 ADCY5O95622 1261 aa16.68■□□□□ 0.26
ABCF3-210ENST00000473311 GTF2F1P35269 517 aaKnown RBP eCLIP16.68■□□□□ 0.26
ABCF3-210ENST00000473311 DNM1Q05193 864 aaKnown RBP16.68■□□□□ 0.26
ABCF3-210ENST00000473311 PLEKHO1Q53GL0 409 aaPredicted RBP16.68■□□□□ 0.26
ABCF3-210ENST00000473311 ERC1Q8IUD2 1116 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms