RNA–Protein interactions for RNA: ENST00000472710.2

LRRC41-203, Transcript of leucine rich repeat containing 41, humanhuman

TSL 2

Gene LRRC41, Length 4,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-203ENST00000472710 HMGB1P09429 215 aaKnown RBP12.22□□□□□ -0.45
LRRC41-203ENST00000472710 USHBP1Q8N6Y0 703 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 FSIP1Q8NA03 581 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 AK7Q96M32 723 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 GTPBP4Q9BZE4 634 aaKnown RBP12.22□□□□□ -0.45
LRRC41-203ENST00000472710 HMG20BQ9P0W2 317 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 ERBB4Q15303 1308 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 CCDC171Q6TFL3 1326 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 FAM177BA6PVY3 158 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 MTHFSDQ2M296 383 aaKnown RBP12.22□□□□□ -0.45
LRRC41-203ENST00000472710 CFAP100Q494V2 611 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 TCEANC2Q96MN5 208 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 CTNNA3Q9UI47 895 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 ATP2B1P20020 1258 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 NPHP3Q7Z494 1330 aa12.22□□□□□ -0.45
LRRC41-203ENST00000472710 CCDC158Q5M9N0 1113 aa12.21□□□□□ -0.45
LRRC41-203ENST00000472710 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
LRRC41-203ENST00000472710 ZSCAN16Q9H4T2 348 aaPredicted RBP12.21□□□□□ -0.45
LRRC41-203ENST00000472710 GUCY1B3Q02153 619 aa12.21□□□□□ -0.45
LRRC41-203ENST00000472710 LARP1Q6PKG0 1096 aaKnown RBP12.21□□□□□ -0.45
LRRC41-203ENST00000472710 CCAR1Q8IX12 1150 aaKnown RBP12.21□□□□□ -0.45
LRRC41-203ENST00000472710 MYOM2P54296 1465 aa12.21□□□□□ -0.45
LRRC41-203ENST00000472710 FILIP1LQ4L180 1135 aa12.21□□□□□ -0.46
LRRC41-203ENST00000472710 C17orf53Q8N3J3 647 aaPredicted RBP12.21□□□□□ -0.46
LRRC41-203ENST00000472710 NOC3LQ8WTT2 800 aaKnown RBP12.21□□□□□ -0.46
LRRC41-203ENST00000472710 NEK1Q96PY6 1258 aa12.21□□□□□ -0.46
LRRC41-203ENST00000472710 DNAJC25Q9H1X3 360 aa12.21□□□□□ -0.46
LRRC41-203ENST00000472710 FOXO3O43524 673 aa12.21□□□□□ -0.46
LRRC41-203ENST00000472710 SKILP12757 684 aa12.21□□□□□ -0.46
LRRC41-203ENST00000472710 ESCO1Q5FWF5 840 aa12.21□□□□□ -0.46
LRRC41-203ENST00000472710 ASXL2Q76L83 1435 aa12.21□□□□□ -0.46
LRRC41-203ENST00000472710 TTLL5Q6EMB2 1281 aa12.2□□□□□ -0.46
LRRC41-203ENST00000472710 CHAMP1Q96JM3 812 aa12.2□□□□□ -0.46
LRRC41-203ENST00000472710 PCMTD1Q96MG8 357 aaPredicted RBP12.2□□□□□ -0.46
LRRC41-203ENST00000472710 TTC41PQ6P2S7 1318 aa12.2□□□□□ -0.46
LRRC41-203ENST00000472710 LEKR1Q6ZMV7 388 aa12.2□□□□□ -0.46
LRRC41-203ENST00000472710 ERCC4Q92889 916 aaPredicted RBP12.2□□□□□ -0.46
LRRC41-203ENST00000472710 DACH1Q9UI36 760 aa12.2□□□□□ -0.46
LRRC41-203ENST00000472710 MAP3K2Q9Y2U5 619 aa12.2□□□□□ -0.46
LRRC41-203ENST00000472710 URI1O94763 535 aaPredicted RBP12.2□□□□□ -0.46
LRRC41-203ENST00000472710 SNW1Q13573 536 aaKnown RBP12.2□□□□□ -0.46
LRRC41-203ENST00000472710 LUZP1Q86V48 1076 aa12.2□□□□□ -0.46
LRRC41-203ENST00000472710 KRT222Q8N1A0 295 aa12.2□□□□□ -0.46
LRRC41-203ENST00000472710 ANXA1P04083 346 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 CPA1P15085 419 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 TTC39AQ5SRH9 613 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 RTL1A6NKG5 1358 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 ADCY10Q96PN6 1610 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 FKBP4Q02790 459 aaKnown RBP eCLIP12.19□□□□□ -0.46
LRRC41-203ENST00000472710 PPFIBP1Q86W92 1011 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 SMARCE1Q969G3 411 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 ZSCAN12O43309 604 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 SIRT2Q8IXJ6 389 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 C8orf76Q96K31 380 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 TBC1D2BQ9UPU7 963 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 SNX14Q9Y5W7 946 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 CDC42BPAQ5VT25 1732 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 AOX1Q06278 1338 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 CDKL5O76039 1030 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 XBP1P17861 261 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 CCT2P78371 535 aaKnown RBP12.19□□□□□ -0.46
LRRC41-203ENST00000472710 SART3Q15020 963 aaKnown RBP12.19□□□□□ -0.46
LRRC41-203ENST00000472710 TMC6Q7Z403 805 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 HYPKQ9NX55 129 aa12.19□□□□□ -0.46
LRRC41-203ENST00000472710 PREX2Q70Z35 1606 aa12.18□□□□□ -0.46
LRRC41-203ENST00000472710 SGSM2O43147 1006 aa12.18□□□□□ -0.46
LRRC41-203ENST00000472710 MPRIPQ6WCQ1 1025 aa12.18□□□□□ -0.46
LRRC41-203ENST00000472710 FEZ1Q99689 392 aa12.18□□□□□ -0.46
LRRC41-203ENST00000472710 CALCOCO1Q9P1Z2 691 aa12.18□□□□□ -0.46
LRRC41-203ENST00000472710 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
LRRC41-203ENST00000472710 RAD50Q92878 1312 aa12.18□□□□□ -0.46
LRRC41-203ENST00000472710 PNMA6EA0A0J9YXQ4 647 aa12.18□□□□□ -0.46
LRRC41-203ENST00000472710 RIOK3O14730 519 aaKnown RBP12.18□□□□□ -0.46
LRRC41-203ENST00000472710 ERLIN1O75477 346 aa12.18□□□□□ -0.46
LRRC41-203ENST00000472710 SLC3A2P08195 630 aaKnown RBP12.18□□□□□ -0.46
LRRC41-203ENST00000472710 HSPA4P34932 840 aa12.18□□□□□ -0.46
LRRC41-203ENST00000472710 SETQ01105 290 aaPredicted RBP12.18□□□□□ -0.46
LRRC41-203ENST00000472710 RUFY3Q7L099 469 aa12.18□□□□□ -0.46
LRRC41-203ENST00000472710 CCDC47Q96A33 483 aaKnown RBP12.18□□□□□ -0.46
LRRC41-203ENST00000472710 IQGAP3Q86VI3 1631 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
LRRC41-203ENST00000472710 BMS1Q14692 1282 aaKnown RBP12.17□□□□□ -0.46
LRRC41-203ENST00000472710 IMMTQ16891 758 aaKnown RBP12.17□□□□□ -0.46
LRRC41-203ENST00000472710 CREB3L3Q68CJ9 461 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 BRF1Q92994 677 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.17□□□□□ -0.461e-6■■■□□ 14.8
LRRC41-203ENST00000472710 CEP126Q9P2H0 1117 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 PALD1Q9ULE6 856 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 CROCC2H7BZ55 1655 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 EDC4Q6P2E9 1401 aaKnown RBP12.17□□□□□ -0.46
LRRC41-203ENST00000472710 EPB41L2O43491 1005 aaKnown RBP12.17□□□□□ -0.46
LRRC41-203ENST00000472710 AMOTQ4VCS5 1084 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 KIAA0232Q92628 1395 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 BIN1O00499 593 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 EIF3JO75822 258 aaKnown RBP12.17□□□□□ -0.46
LRRC41-203ENST00000472710 TOP1P11387 765 aaKnown RBP12.17□□□□□ -0.46
LRRC41-203ENST00000472710 CCDC150Q8NCX0 1101 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 MYD88Q99836 296 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 BRMS1Q9HCU9 246 aa12.17□□□□□ -0.46
LRRC41-203ENST00000472710 NMIQ13287 307 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms