RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 PTGER2P43116 358 aa15.83■□□□□ 0.12
PRKCB-205ENST00000472066 YTHDC1Q96MU7 727 aaKnown RBP15.83■□□□□ 0.12
PRKCB-205ENST00000472066 MAP3K15Q6ZN16 1313 aa15.83■□□□□ 0.12
PRKCB-205ENST00000472066 RGL2O15211 777 aa15.82■□□□□ 0.12
PRKCB-205ENST00000472066 CT47B1P0C2W7 299 aaPredicted RBP15.82■□□□□ 0.12
PRKCB-205ENST00000472066 POLD1P28340 1107 aa15.82■□□□□ 0.12
PRKCB-205ENST00000472066 TM4SF1P30408 202 aa15.82■□□□□ 0.12
PRKCB-205ENST00000472066 CLEC4GQ6UXB4 293 aa15.82■□□□□ 0.12
PRKCB-205ENST00000472066 ZNF428Q96B54 188 aa15.82■□□□□ 0.12
PRKCB-205ENST00000472066 ZBTB3Q9H5J0 574 aa15.82■□□□□ 0.12
PRKCB-205ENST00000472066 MMP10P09238 476 aa15.81■□□□□ 0.12
PRKCB-205ENST00000472066 HLFQ16534 295 aa15.81■□□□□ 0.12
PRKCB-205ENST00000472066 ANKRD13DQ6ZTN6 518 aa15.81■□□□□ 0.12
PRKCB-205ENST00000472066 ZNF652Q9Y2D9 606 aa15.81■□□□□ 0.12
PRKCB-205ENST00000472066 NFIXQ14938 502 aa15.8■□□□□ 0.12
PRKCB-205ENST00000472066 TBC1D9BQ66K14 1250 aa15.8■□□□□ 0.12
PRKCB-205ENST00000472066 G2E3Q7L622 706 aa15.8■□□□□ 0.12
PRKCB-205ENST00000472066 PLBD2Q8NHP8 589 aa15.8■□□□□ 0.12
PRKCB-205ENST00000472066 GIGYF2Q6Y7W6 1299 aaKnown RBP15.79■□□□□ 0.12
PRKCB-205ENST00000472066 BICDL1Q6ZP65 573 aa15.79■□□□□ 0.12
PRKCB-205ENST00000472066 C4AP0C0L4 1744 aa15.79■□□□□ 0.12
PRKCB-205ENST00000472066 DDR1Q08345 913 aa15.78■□□□□ 0.12
PRKCB-205ENST00000472066 ALDH1L2Q3SY69 923 aa15.78■□□□□ 0.12
PRKCB-205ENST00000472066 MRPL50Q8N5N7 158 aaKnown RBP15.78■□□□□ 0.12
PRKCB-205ENST00000472066 SSH1Q8WYL5 1049 aa15.78■□□□□ 0.12
PRKCB-205ENST00000472066 SETDB2Q96T68 719 aa15.78■□□□□ 0.12
PRKCB-205ENST00000472066 PARP3Q9Y6F1 533 aa15.78■□□□□ 0.12
PRKCB-205ENST00000472066 POLRMTO00411 1230 aaKnown RBP15.77■□□□□ 0.12
PRKCB-205ENST00000472066 DDX58O95786 925 aaKnown RBP15.77■□□□□ 0.12
PRKCB-205ENST00000472066 FLIIQ13045 1269 aa15.77■□□□□ 0.12
PRKCB-205ENST00000472066 RIC3Q7Z5B4 369 aa15.77■□□□□ 0.12
PRKCB-205ENST00000472066 SRCAPQ6ZRS2 3230 aa15.77■□□□□ 0.11
PRKCB-205ENST00000472066 RARSP54136 660 aaKnown RBP15.76■□□□□ 0.11
PRKCB-205ENST00000472066 TCIRG1Q13488 830 aa15.76■□□□□ 0.11
PRKCB-205ENST00000472066 KSR2Q6VAB6 950 aa15.76■□□□□ 0.11
PRKCB-205ENST00000472066 ZNF34Q8IZ26 560 aa15.76■□□□□ 0.11
PRKCB-205ENST00000472066 PPP1R1BQ9UD71 204 aaPredicted RBP15.76■□□□□ 0.11
PRKCB-205ENST00000472066 NIP7Q9Y221 180 aaKnown RBP eCLIP15.76■□□□□ 0.11
PRKCB-205ENST00000472066 PI4KAP2A4QPH2 592 aa15.75■□□□□ 0.11
PRKCB-205ENST00000472066 SERPINB2P05120 415 aa15.75■□□□□ 0.11
PRKCB-205ENST00000472066 HSP90AB3PQ58FF7 597 aa15.75■□□□□ 0.11
PRKCB-205ENST00000472066 PI4KAP1Q8N8J0 262 aa15.75■□□□□ 0.11
PRKCB-205ENST00000472066 BCL2L13Q9BXK5 485 aa15.75■□□□□ 0.11
PRKCB-205ENST00000472066 SMC4Q9NTJ3 1288 aa15.75■□□□□ 0.11
PRKCB-205ENST00000472066 FKBP5Q13451 457 aaPredicted RBP15.74■□□□□ 0.11
PRKCB-205ENST00000472066 MAP3K2Q9Y2U5 619 aa15.74■□□□□ 0.11
PRKCB-205ENST00000472066 ATP10DQ9P241 1426 aa15.74■□□□□ 0.11
PRKCB-205ENST00000472066 COL24A1Q17RW2 1714 aa15.74■□□□□ 0.11
PRKCB-205ENST00000472066 SCN7AQ01118 1682 aa15.73■□□□□ 0.11
PRKCB-205ENST00000472066 GPTP24298 496 aa15.73■□□□□ 0.11
PRKCB-205ENST00000472066 BRPF1P55201 1214 aaPredicted RBP15.73■□□□□ 0.11
PRKCB-205ENST00000472066 METTL22Q9BUU2 404 aaPredicted RBP15.73■□□□□ 0.11
PRKCB-205ENST00000472066 ADCY9O60503 1353 aa15.73■□□□□ 0.11
PRKCB-205ENST00000472066 CARMIL3Q8ND23 1372 aa15.73■□□□□ 0.11
PRKCB-205ENST00000472066 PARP10Q53GL7 1025 aa15.72■□□□□ 0.11
PRKCB-205ENST00000472066 SUSD4Q5VX71 490 aa15.72■□□□□ 0.11
PRKCB-205ENST00000472066 MYD88Q99836 296 aa15.72■□□□□ 0.11
PRKCB-205ENST00000472066 ISCA1Q9BUE6 129 aa15.72■□□□□ 0.11
PRKCB-205ENST00000472066 BCORQ6W2J9 1755 aa15.72■□□□□ 0.11
PRKCB-205ENST00000472066 UBN2Q6ZU65 1347 aa15.71■□□□□ 0.11
PRKCB-205ENST00000472066 FAM177BA6PVY3 158 aa15.71■□□□□ 0.11
PRKCB-205ENST00000472066 ATP5J2-PTCD1G3V325 749 aa15.71■□□□□ 0.11
PRKCB-205ENST00000472066 BCAR3O75815 825 aa15.71■□□□□ 0.11
PRKCB-205ENST00000472066 TRIM28Q13263 835 aaKnown RBP15.71■□□□□ 0.11
PRKCB-205ENST00000472066 TPTE2Q6XPS3 522 aa15.71■□□□□ 0.11
PRKCB-205ENST00000472066 NLRP10Q86W26 655 aa15.71■□□□□ 0.11
PRKCB-205ENST00000472066 NBPF5PQ86XG9 351 aaPredicted RBP15.71■□□□□ 0.11
PRKCB-205ENST00000472066 FHDC1Q9C0D6 1143 aaPredicted RBP15.71■□□□□ 0.11
PRKCB-205ENST00000472066 LRP5O75197 1615 aa15.71■□□□□ 0.11
PRKCB-205ENST00000472066 PTPRCP08575 1304 aa15.7■□□□□ 0.1
PRKCB-205ENST00000472066 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
PRKCB-205ENST00000472066 PPP1R42Q7Z4L9 355 aa15.7■□□□□ 0.1
PRKCB-205ENST00000472066 DNAAF4Q8WXU2 420 aa15.7■□□□□ 0.1
PRKCB-205ENST00000472066 NOB1Q9ULX3 412 aaKnown RBP15.7■□□□□ 0.1
PRKCB-205ENST00000472066 CD2APQ9Y5K6 639 aa15.7■□□□□ 0.1
PRKCB-205ENST00000472066 F6X3S4 739 aa15.69■□□□□ 0.1
PRKCB-205ENST00000472066 NEXNQ0ZGT2 675 aa15.69■□□□□ 0.1
PRKCB-205ENST00000472066 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
PRKCB-205ENST00000472066 CCDC24Q8N4L8 307 aa15.69■□□□□ 0.1
PRKCB-205ENST00000472066 CNBD1Q8NA66 436 aa15.69■□□□□ 0.1
PRKCB-205ENST00000472066 UTP14AQ9BVJ6 771 aaKnown RBP15.69■□□□□ 0.1
PRKCB-205ENST00000472066 NYXQ9GZU5 481 aa15.69■□□□□ 0.1
PRKCB-205ENST00000472066 NPHP1O15259 732 aa15.68■□□□□ 0.1
PRKCB-205ENST00000472066 NTSR2O95665 410 aa15.68■□□□□ 0.1
PRKCB-205ENST00000472066 IGKV5-2P06315 115 aa15.68■□□□□ 0.1
PRKCB-205ENST00000472066 CCDC191Q8NCU4 936 aa15.68■□□□□ 0.1
PRKCB-205ENST00000472066 SYT17Q9BSW7 474 aa15.68■□□□□ 0.1
PRKCB-205ENST00000472066 IBTKQ9P2D0 1353 aaPredicted RBP15.67■□□□□ 0.1
PRKCB-205ENST00000472066 GTF2E1P29083 439 aaPredicted RBP15.67■□□□□ 0.1
PRKCB-205ENST00000472066 ST5P78524 1137 aa15.67■□□□□ 0.1
PRKCB-205ENST00000472066 ERFEQ4G0M1 354 aa15.67■□□□□ 0.1
PRKCB-205ENST00000472066 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
PRKCB-205ENST00000472066 LINS1Q8NG48 757 aa15.67■□□□□ 0.1
PRKCB-205ENST00000472066 BRIP1Q9BX63 1249 aa15.67■□□□□ 0.1
PRKCB-205ENST00000472066 TRMT112Q9UI30 125 aaKnown RBP15.67■□□□□ 0.1
PRKCB-205ENST00000472066 C10orf71Q711Q0 1435 aa15.67■□□□□ 0.1
PRKCB-205ENST00000472066 NEURL1BA8MQ27 555 aa15.66■□□□□ 0.1
PRKCB-205ENST00000472066 TGFB2P61812 414 aa15.66■□□□□ 0.1
PRKCB-205ENST00000472066 CWF19L2Q2TBE0 894 aaKnown RBP15.66■□□□□ 0.1
PRKCB-205ENST00000472066 BEND3Q5T5X7 828 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms