RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SYT9Q86SS6 491 aa3.35□□□□□ -1.87
UBXN4-207ENST00000471246 ESYT1Q9BSJ8 1104 aa3.35□□□□□ -1.87
UBXN4-207ENST00000471246 FHDC1Q9C0D6 1143 aaPredicted RBP3.35□□□□□ -1.87
UBXN4-207ENST00000471246 SNRKQ9NRH2 765 aa3.35□□□□□ -1.87
UBXN4-207ENST00000471246 STRN4Q9NRL3 753 aa3.35□□□□□ -1.87
UBXN4-207ENST00000471246 NDUFB9Q9Y6M9 179 aa3.35□□□□□ -1.87
UBXN4-207ENST00000471246 ZBBXA8MT70 800 aa3.34□□□□□ -1.87
UBXN4-207ENST00000471246 APBB1O00213 710 aa3.34□□□□□ -1.87
UBXN4-207ENST00000471246 SCTRP47872 440 aa3.34□□□□□ -1.87
UBXN4-207ENST00000471246 KRTAP1-1Q07627 177 aa3.34□□□□□ -1.87
UBXN4-207ENST00000471246 GNASQ5JWF2 1037 aa3.34□□□□□ -1.87
UBXN4-207ENST00000471246 NLRP8Q86W28 1048 aa3.34□□□□□ -1.87
UBXN4-207ENST00000471246 CNKSR1Q969H4 720 aa3.34□□□□□ -1.87
UBXN4-207ENST00000471246 ZIC5Q96T25 663 aa3.34□□□□□ -1.87
UBXN4-207ENST00000471246 OSBPL3Q9H4L5 887 aa3.34□□□□□ -1.87
UBXN4-207ENST00000471246 DBX1A6NMT0 343 aa3.33□□□□□ -1.88
UBXN4-207ENST00000471246 TRAK2O60296 914 aa3.33□□□□□ -1.88
UBXN4-207ENST00000471246 GIGYF1O75420 1035 aaPredicted RBP3.33□□□□□ -1.88
UBXN4-207ENST00000471246 BUD31P41223 144 aaPredicted RBP3.33□□□□□ -1.88
UBXN4-207ENST00000471246 ZNF124Q15973 351 aa3.33□□□□□ -1.88
UBXN4-207ENST00000471246 TBC1D2BQ9UPU7 963 aa3.33□□□□□ -1.88
UBXN4-207ENST00000471246 JAG2Q9Y219 1238 aa3.33□□□□□ -1.88
UBXN4-207ENST00000471246 PCDHB9Q9Y5E1 797 aa3.33□□□□□ -1.88
UBXN4-207ENST00000471246 SIN3BO75182 1162 aa3.32□□□□□ -1.88
UBXN4-207ENST00000471246 ATP4AP20648 1035 aa3.32□□□□□ -1.88
UBXN4-207ENST00000471246 RAC1P63000 192 aa3.32□□□□□ -1.88
UBXN4-207ENST00000471246 NR1H3Q13133 447 aa3.32□□□□□ -1.88
UBXN4-207ENST00000471246 MCM6Q14566 821 aa3.32□□□□□ -1.88
UBXN4-207ENST00000471246 TMEM214Q6NUQ4 689 aaKnown RBP3.32□□□□□ -1.88
UBXN4-207ENST00000471246 ILDR2Q71H61 639 aa3.32□□□□□ -1.88
UBXN4-207ENST00000471246 FMR1NBQ8N0W7 255 aaPredicted RBP3.32□□□□□ -1.88
UBXN4-207ENST00000471246 B8ZZF3 427 aa3.31□□□□□ -1.88
UBXN4-207ENST00000471246 WNT11O96014 354 aa3.31□□□□□ -1.88
UBXN4-207ENST00000471246 ZNF648Q5T619 568 aaPredicted RBP3.31□□□□□ -1.88
UBXN4-207ENST00000471246 DTX1Q86Y01 620 aa3.31□□□□□ -1.88
UBXN4-207ENST00000471246 TNFRSF25Q93038 417 aa3.31□□□□□ -1.88
UBXN4-207ENST00000471246 XAGE2Q96GT9 111 aa3.31□□□□□ -1.88
UBXN4-207ENST00000471246 MARK1Q9P0L2 795 aa3.31□□□□□ -1.88
UBXN4-207ENST00000471246 A0A1W2PNR3 127 aa3.3□□□□□ -1.88
UBXN4-207ENST00000471246 FAM157BP0CG42 384 aa3.3□□□□□ -1.88
UBXN4-207ENST00000471246 IRF5Q13568 498 aa3.3□□□□□ -1.88
UBXN4-207ENST00000471246 LILRA6Q6PI73 481 aa3.3□□□□□ -1.88
UBXN4-207ENST00000471246 ABI1Q8IZP0 508 aa3.3□□□□□ -1.88
UBXN4-207ENST00000471246 RHBDD1Q8TEB9 315 aa3.3□□□□□ -1.88
UBXN4-207ENST00000471246 ZNF592Q92610 1267 aa3.3□□□□□ -1.88
UBXN4-207ENST00000471246 ASIC4Q96FT7 647 aa3.3□□□□□ -1.88
UBXN4-207ENST00000471246 ZNF330Q9Y3S2 320 aaPredicted RBP3.3□□□□□ -1.88
UBXN4-207ENST00000471246 EFSO43281 561 aa3.29□□□□□ -1.88
UBXN4-207ENST00000471246 LILRB5O75023 590 aa3.29□□□□□ -1.88
UBXN4-207ENST00000471246 GNRH1P01148 92 aa3.29□□□□□ -1.88
UBXN4-207ENST00000471246 IGLV1-40P01703 118 aa3.29□□□□□ -1.88
UBXN4-207ENST00000471246 ADH7P40394 386 aa3.29□□□□□ -1.88
UBXN4-207ENST00000471246 ABL2P42684 1182 aa3.29□□□□□ -1.88
UBXN4-207ENST00000471246 TBC1D9Q6ZT07 1266 aa3.29□□□□□ -1.88
UBXN4-207ENST00000471246 GDPD2Q9HCC8 539 aa3.29□□□□□ -1.88
UBXN4-207ENST00000471246 PRM3Q9NNZ6 103 aa3.29□□□□□ -1.88
UBXN4-207ENST00000471246 GTF2E1P29083 439 aaPredicted RBP3.28□□□□□ -1.88
UBXN4-207ENST00000471246 PLA2G4AP47712 749 aa3.28□□□□□ -1.88
UBXN4-207ENST00000471246 MCCD1P59942 119 aaPredicted RBP3.28□□□□□ -1.88
UBXN4-207ENST00000471246 INTS5Q6P9B9 1019 aaKnown RBP3.28□□□□□ -1.88
UBXN4-207ENST00000471246 PPARGC1BQ86YN6 1023 aaKnown RBP3.28□□□□□ -1.88
UBXN4-207ENST00000471246 ZDHHC13Q8IUH4 622 aa3.28□□□□□ -1.88
UBXN4-207ENST00000471246 DZIP1LQ8IYY4 767 aaKnown RBP3.28□□□□□ -1.88
UBXN4-207ENST00000471246 PCDHB11Q9Y5F2 797 aa3.28□□□□□ -1.88
UBXN4-207ENST00000471246 EIF4G2P78344 907 aaKnown RBP eCLIP3.27□□□□□ -1.89
UBXN4-207ENST00000471246 VAC14Q08AM6 782 aa3.27□□□□□ -1.89
UBXN4-207ENST00000471246 RNF20Q5VTR2 975 aa3.27□□□□□ -1.89
UBXN4-207ENST00000471246 CBLL1Q75N03 491 aa3.27□□□□□ -1.89
UBXN4-207ENST00000471246 DMRTC2Q8IXT2 367 aaPredicted RBP3.27□□□□□ -1.89
UBXN4-207ENST00000471246 C1orf216Q8TAB5 229 aa3.27□□□□□ -1.89
UBXN4-207ENST00000471246 SLC30A3Q99726 388 aa3.27□□□□□ -1.89
UBXN4-207ENST00000471246 COG6Q9Y2V7 657 aa3.27□□□□□ -1.89
UBXN4-207ENST00000471246 PRR19A6NJB7 356 aa3.26□□□□□ -1.89
UBXN4-207ENST00000471246 PTCD1O75127 700 aaKnown RBP3.26□□□□□ -1.89
UBXN4-207ENST00000471246 ITGB5P18084 799 aa3.26□□□□□ -1.89
UBXN4-207ENST00000471246 TMEM132AQ24JP5 1023 aa3.26□□□□□ -1.89
UBXN4-207ENST00000471246 CCDC125Q86Z20 511 aa3.26□□□□□ -1.89
UBXN4-207ENST00000471246 POM121Q96HA1 1249 aa3.26□□□□□ -1.89
UBXN4-207ENST00000471246 CCDC85AQ96PX6 553 aaPredicted RBP3.26□□□□□ -1.89
UBXN4-207ENST00000471246 CEP126Q9P2H0 1117 aa3.26□□□□□ -1.89
UBXN4-207ENST00000471246 GSC2O15499 205 aa3.25□□□□□ -1.89
UBXN4-207ENST00000471246 UBTFP17480 764 aaKnown RBP3.25□□□□□ -1.89
UBXN4-207ENST00000471246 GRIK1P39086 918 aa3.25□□□□□ -1.89
UBXN4-207ENST00000471246 FLIIQ13045 1269 aa3.25□□□□□ -1.89
UBXN4-207ENST00000471246 WASHC4Q2M389 1173 aa3.25□□□□□ -1.89
UBXN4-207ENST00000471246 ARSJQ5FYB0 599 aaPredicted RBP3.25□□□□□ -1.89
UBXN4-207ENST00000471246 SAMD5Q5TGI4 173 aa3.25□□□□□ -1.89
UBXN4-207ENST00000471246 AIDAQ96BJ3 306 aa3.25□□□□□ -1.89
UBXN4-207ENST00000471246 CDCA7Q9BWT1 371 aaPredicted RBP3.25□□□□□ -1.89
UBXN4-207ENST00000471246 DOLKQ9UPQ8 538 aa3.25□□□□□ -1.89
UBXN4-207ENST00000471246 RAXQ9Y2V3 346 aa3.25□□□□□ -1.89
UBXN4-207ENST00000471246 ALX3O95076 343 aa3.24□□□□□ -1.89
UBXN4-207ENST00000471246 MYCP01106 439 aaPredicted RBP3.24□□□□□ -1.89
UBXN4-207ENST00000471246 SOX11P35716 441 aa3.24□□□□□ -1.89
UBXN4-207ENST00000471246 AFF1P51825 1210 aaKnown RBP3.24□□□□□ -1.89
UBXN4-207ENST00000471246 SLFNL1Q499Z3 407 aa3.24□□□□□ -1.89
UBXN4-207ENST00000471246 FBXO11Q86XK2 927 aa3.24□□□□□ -1.89
UBXN4-207ENST00000471246 NUDT8Q8WV74 236 aa3.24□□□□□ -1.89
UBXN4-207ENST00000471246 JPH1Q9HDC5 661 aaPredicted RBP3.24□□□□□ -1.89
UBXN4-207ENST00000471246 RAD21O60216 631 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms