RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 ANKRD50Q9ULJ7 1429 aa5.01□□□□□ -1.61
VPS50-210ENST00000471188 TSPOAP1O95153 1857 aa5.01□□□□□ -1.61
VPS50-210ENST00000471188 GSPT1P15170 499 aaKnown RBP5.01□□□□□ -1.61
VPS50-210ENST00000471188 TDO2P48775 406 aa5.01□□□□□ -1.61
VPS50-210ENST00000471188 CAMK4Q16566 473 aa5.01□□□□□ -1.61
VPS50-210ENST00000471188 ARHGAP29Q52LW3 1261 aa5.01□□□□□ -1.61
VPS50-210ENST00000471188 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS50-210ENST00000471188 AK7Q96M32 723 aa5.01□□□□□ -1.61
VPS50-210ENST00000471188 BRMS1Q9HCU9 246 aa5.01□□□□□ -1.61
VPS50-210ENST00000471188 SPAG9O60271 1321 aaKnown RBP5□□□□□ -1.61
VPS50-210ENST00000471188 WDR33Q9C0J8 1336 aaKnown RBP5□□□□□ -1.61
VPS50-210ENST00000471188 ARHGEF12Q9NZN5 1544 aa5□□□□□ -1.61
VPS50-210ENST00000471188 PNMA6AP0CW24 399 aaPredicted RBP5□□□□□ -1.61
VPS50-210ENST00000471188 SKIDA1Q1XH10 827 aa5□□□□□ -1.61
VPS50-210ENST00000471188 ZSCAN25Q6NSZ9 544 aa5□□□□□ -1.61
VPS50-210ENST00000471188 LEKR1Q6ZMV7 388 aa5□□□□□ -1.61
VPS50-210ENST00000471188 FILIP1Q7Z7B0 1213 aa5□□□□□ -1.61
VPS50-210ENST00000471188 SYTL4Q96C24 671 aaPredicted RBP5□□□□□ -1.61
VPS50-210ENST00000471188 CCDC34Q96HJ3 373 aa5□□□□□ -1.61
VPS50-210ENST00000471188 CLIP2Q9UDT6 1046 aa5□□□□□ -1.61
VPS50-210ENST00000471188 PRAG1Q86YV5 1406 aa5□□□□□ -1.61
VPS50-210ENST00000471188 CDK13Q14004 1512 aaKnown RBP5□□□□□ -1.61
VPS50-210ENST00000471188 ANKRD65E5RJM6 399 aa5□□□□□ -1.61
VPS50-210ENST00000471188 ARHGAP33O14559 1287 aa5□□□□□ -1.61
VPS50-210ENST00000471188 TSPY4P0CV99 314 aa5□□□□□ -1.61
VPS50-210ENST00000471188 TSPY10P0CW01 314 aa5□□□□□ -1.61
VPS50-210ENST00000471188 UBE2HP62256 183 aa5□□□□□ -1.61
VPS50-210ENST00000471188 TTLL5Q6EMB2 1281 aa5□□□□□ -1.61
VPS50-210ENST00000471188 C16orf71Q8IYS4 520 aaPredicted RBP5□□□□□ -1.61
VPS50-210ENST00000471188 ADAM33Q9BZ11 813 aa5□□□□□ -1.61
VPS50-210ENST00000471188 UPF3BQ9BZI7 483 aaKnown RBP5□□□□□ -1.61
VPS50-210ENST00000471188 OAS2P29728 719 aaKnown RBP4.99□□□□□ -1.61
VPS50-210ENST00000471188 MFSD10Q14728 455 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 MUM1L1Q5H9M0 696 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 RNF20Q5VTR2 975 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 CCDC91Q7Z6B0 441 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 SRLQ86TD4 932 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 CKAP2LQ8IYA6 745 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 FAM200AQ8TCP9 573 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 CACTINQ8WUQ7 758 aaKnown RBP4.99□□□□□ -1.61
VPS50-210ENST00000471188 UBXN4Q92575 508 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 CFAP53Q96M91 514 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 EXOC6BQ9Y2D4 811 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 STRCQ7RTU9 1775 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 PREX1Q8TCU6 1659 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 ASXL1Q8IXJ9 1541 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 RAPGEF6Q8TEU7 1601 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 GOLGA6L4A6NEF3 574 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 USP27XA6NNY8 438 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 DTNBO60941 627 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 MCCP23508 829 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 PLA2G4AP47712 749 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 GNL2Q13823 731 aaKnown RBP4.99□□□□□ -1.61
VPS50-210ENST00000471188 SRCIN1Q9C0H9 1055 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 PSDA5PKW4 1024 aaPredicted RBP4.99□□□□□ -1.61
VPS50-210ENST00000471188 SKILP12757 684 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 CASTP20810 708 aaKnown RBP4.99□□□□□ -1.61
VPS50-210ENST00000471188 DNAJC21Q5F1R6 531 aaKnown RBP4.99□□□□□ -1.61
VPS50-210ENST00000471188 ADGRD1Q6QNK2 874 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 HOMER1Q86YM7 354 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 NFATC2IPQ8NCF5 419 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 MNS1Q8NEH6 495 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 KCTD12Q96CX2 325 aaKnown RBP4.99□□□□□ -1.61
VPS50-210ENST00000471188 CXorf56Q9H5V9 222 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 FHOD1Q9Y613 1164 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 TCHHQ07283 1943 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 CCDC171Q6TFL3 1326 aa4.99□□□□□ -1.61
VPS50-210ENST00000471188 ADGRL1O94910 1474 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 ELL2O00472 640 aaPredicted RBP4.98□□□□□ -1.61
VPS50-210ENST00000471188 ERC2O15083 957 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 SEC31AO94979 1220 aaKnown RBP4.98□□□□□ -1.61
VPS50-210ENST00000471188 SDSP20132 328 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 MCM2P49736 904 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 FOSBP53539 338 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 TTC22Q5TAA0 569 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 PLEKHM2Q8IWE5 1019 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 ZDHHC16Q969W1 377 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 PLXNC1O60486 1568 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 GOLGA6L19H0YKK7 550 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 GOLIM4O00461 696 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 ATP2B1P20020 1258 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 PTPN5P54829 565 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 ARID5BQ14865 1188 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 MAP3K11Q16584 847 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 SLFNL1Q499Z3 407 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 ANO6Q4KMQ2 910 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 TMED8Q6PL24 325 aaPredicted RBP4.98□□□□□ -1.61
VPS50-210ENST00000471188 PACS2Q86VP3 889 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 ANKRD20A12PQ8NF67 263 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 FBXO18Q8NFZ0 1043 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 GOLGA5Q8TBA6 731 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 ANO2Q9NQ90 1003 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 PCDHGA10Q9Y5H3 936 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 CCDC141Q6ZP82 1450 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 WDR7Q9Y4E6 1490 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 ITSN2Q9NZM3 1697 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 MAP3K7O43318 606 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 PTPREP23469 700 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 MAP2K2P36507 400 aa4.98□□□□□ -1.61
VPS50-210ENST00000471188 MTHFSP49914 203 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms