RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 KLF15Q9UIH9 416 aa10.48□□□□□ -0.73
PRPF40A-206ENST00000471167 NOVA2Q9UNW9 492 aaKnown RBP10.48□□□□□ -0.73
PRPF40A-206ENST00000471167 DCDC2BA2VCK2 349 aa10.47□□□□□ -0.73
PRPF40A-206ENST00000471167 C1orf53Q5VUE5 145 aa10.47□□□□□ -0.73
PRPF40A-206ENST00000471167 SLAIN2Q9P270 581 aa10.47□□□□□ -0.73
PRPF40A-206ENST00000471167 IGFBP4P22692 258 aa10.46□□□□□ -0.73
PRPF40A-206ENST00000471167 ELOAQ14241 798 aaKnown RBP10.46□□□□□ -0.73
PRPF40A-206ENST00000471167 ALDH16A1Q8IZ83 802 aa10.46□□□□□ -0.73
PRPF40A-206ENST00000471167 HSH2DQ96JZ2 352 aa10.46□□□□□ -0.73
PRPF40A-206ENST00000471167 RBM19Q9Y4C8 960 aaKnown RBP10.46□□□□□ -0.73
PRPF40A-206ENST00000471167 FAM157BP0CG42 384 aa10.45□□□□□ -0.74
PRPF40A-206ENST00000471167 CD33P20138 364 aa10.45□□□□□ -0.74
PRPF40A-206ENST00000471167 FIGNL1Q6PIW4 674 aa10.45□□□□□ -0.74
PRPF40A-206ENST00000471167 BICDL1Q6ZP65 573 aa10.45□□□□□ -0.74
PRPF40A-206ENST00000471167 FAM200AQ8TCP9 573 aa10.45□□□□□ -0.74
PRPF40A-206ENST00000471167 CHMP7Q8WUX9 453 aaPredicted RBP10.45□□□□□ -0.74
PRPF40A-206ENST00000471167 BCS1LQ9Y276 419 aa10.45□□□□□ -0.74
PRPF40A-206ENST00000471167 KHNYNO15037 678 aaKnown RBP10.44□□□□□ -0.74
PRPF40A-206ENST00000471167 ATG7O95352 703 aa10.44□□□□□ -0.74
PRPF40A-206ENST00000471167 BCRP11274 1271 aa10.44□□□□□ -0.74
PRPF40A-206ENST00000471167 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
PRPF40A-206ENST00000471167 PHF24Q9UPV7 400 aa10.44□□□□□ -0.74
PRPF40A-206ENST00000471167 SHISA8B8ZZ34 492 aa10.43□□□□□ -0.74
PRPF40A-206ENST00000471167 OCLNQ16625 522 aa10.43□□□□□ -0.74
PRPF40A-206ENST00000471167 C14orf37Q86TY3 774 aa10.43□□□□□ -0.74
PRPF40A-206ENST00000471167 RHPN1Q8TCX5 695 aa10.43□□□□□ -0.74
PRPF40A-206ENST00000471167 OXCT2Q9BYC2 517 aaPredicted RBP10.43□□□□□ -0.74
PRPF40A-206ENST00000471167 FAM181BA6NEQ2 426 aa10.42□□□□□ -0.74
PRPF40A-206ENST00000471167 OIP5O43482 229 aa10.42□□□□□ -0.74
PRPF40A-206ENST00000471167 MAP2K3P46734 347 aa10.42□□□□□ -0.74
PRPF40A-206ENST00000471167 SFSWAPQ12872 951 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-206ENST00000471167 FAM182BQ5T319 152 aa10.42□□□□□ -0.74
PRPF40A-206ENST00000471167 TMEM164Q5U3C3 297 aa10.42□□□□□ -0.74
PRPF40A-206ENST00000471167 SUSD3Q96L08 255 aa10.42□□□□□ -0.74
PRPF40A-206ENST00000471167 SERPINA10Q9UK55 444 aa10.42□□□□□ -0.74
PRPF40A-206ENST00000471167 GPC6Q9Y625 555 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-206ENST00000471167 BMP4P12644 408 aa10.41□□□□□ -0.74
PRPF40A-206ENST00000471167 HOXB4P17483 251 aaPredicted RBP10.41□□□□□ -0.74
PRPF40A-206ENST00000471167 NGLY1Q96IV0 654 aa10.41□□□□□ -0.74
PRPF40A-206ENST00000471167 PRIMPOLQ96LW4 560 aa10.41□□□□□ -0.74
PRPF40A-206ENST00000471167 QTRT2Q9H974 415 aaKnown RBP10.41□□□□□ -0.74
PRPF40A-206ENST00000471167 ACIN1Q9UKV3 1341 aaKnown RBP10.4□□□□□ -0.74
PRPF40A-206ENST00000471167 FKBP5Q13451 457 aaPredicted RBP10.4□□□□□ -0.74
PRPF40A-206ENST00000471167 PBXIP1Q96AQ6 731 aa10.4□□□□□ -0.74
PRPF40A-206ENST00000471167 DMGDHQ9UI17 866 aaKnown RBP10.4□□□□□ -0.74
PRPF40A-206ENST00000471167 GRNP28799 593 aaKnown RBP10.39□□□□□ -0.75
PRPF40A-206ENST00000471167 CAPN12Q6ZSI9 719 aa10.39□□□□□ -0.75
PRPF40A-206ENST00000471167 CCDC97Q96F63 343 aaPredicted RBP10.39□□□□□ -0.75
PRPF40A-206ENST00000471167 LRRC4BQ9NT99 713 aa10.39□□□□□ -0.75
PRPF40A-206ENST00000471167 GGA1Q9UJY5 639 aa10.39□□□□□ -0.75
PRPF40A-206ENST00000471167 TYRO3Q06418 890 aa10.38□□□□□ -0.75
PRPF40A-206ENST00000471167 SLC30A3Q99726 388 aa10.38□□□□□ -0.75
PRPF40A-206ENST00000471167 MDFIQ99750 246 aa10.38□□□□□ -0.75
PRPF40A-206ENST00000471167 LRFN2Q9ULH4 789 aa10.38□□□□□ -0.75
PRPF40A-206ENST00000471167 NSFL1CQ9UNZ2 370 aaKnown RBP10.38□□□□□ -0.75
PRPF40A-206ENST00000471167 GJA3Q9Y6H8 435 aa10.38□□□□□ -0.75
PRPF40A-206ENST00000471167 PRMT3O60678 531 aa10.37□□□□□ -0.75
PRPF40A-206ENST00000471167 KCNMA1Q12791 1236 aa10.37□□□□□ -0.75
PRPF40A-206ENST00000471167 FCHSD1Q86WN1 690 aa10.37□□□□□ -0.75
PRPF40A-206ENST00000471167 MARK1Q9P0L2 795 aa10.37□□□□□ -0.75
PRPF40A-206ENST00000471167 ARAFP10398 606 aa10.36□□□□□ -0.75
PRPF40A-206ENST00000471167 LAMC2Q13753 1193 aa10.36□□□□□ -0.75
PRPF40A-206ENST00000471167 RTN1Q16799 776 aa10.36□□□□□ -0.75
PRPF40A-206ENST00000471167 SWI5Q1ZZU3 235 aa10.36□□□□□ -0.75
PRPF40A-206ENST00000471167 GALNT6Q8NCL4 622 aa10.36□□□□□ -0.75
PRPF40A-206ENST00000471167 KLK14Q9P0G3 267 aa10.36□□□□□ -0.75
PRPF40A-206ENST00000471167 CHMP3Q9Y3E7 222 aa10.36□□□□□ -0.75
PRPF40A-206ENST00000471167 DNMT3AQ9Y6K1 912 aaPredicted RBP10.36□□□□□ -0.75
PRPF40A-206ENST00000471167 CNTNAP5Q8WYK1 1306 aa10.35□□□□□ -0.75
PRPF40A-206ENST00000471167 NEURL1BA8MQ27 555 aa10.35□□□□□ -0.75
PRPF40A-206ENST00000471167 FOXO3O43524 673 aa10.35□□□□□ -0.75
PRPF40A-206ENST00000471167 KCNQ4P56696 695 aa10.35□□□□□ -0.75
PRPF40A-206ENST00000471167 SNRPNP63162 240 aaKnown RBP10.35□□□□□ -0.75
PRPF40A-206ENST00000471167 BTLAQ7Z6A9 289 aa10.35□□□□□ -0.75
PRPF40A-206ENST00000471167 EPXP11678 715 aa10.34□□□□□ -0.75
PRPF40A-206ENST00000471167 PCBP4P57723 403 aaKnown RBP10.34□□□□□ -0.75
PRPF40A-206ENST00000471167 MAP3K10Q02779 954 aa10.34□□□□□ -0.75
PRPF40A-206ENST00000471167 FAM26DQ5JW98 314 aa10.34□□□□□ -0.75
PRPF40A-206ENST00000471167 ZNF468Q5VIY5 522 aaPredicted RBP10.34□□□□□ -0.75
PRPF40A-206ENST00000471167 SLCO4C1Q6ZQN7 724 aa10.34□□□□□ -0.75
PRPF40A-206ENST00000471167 EDARADDQ8WWZ3 215 aa10.34□□□□□ -0.75
PRPF40A-206ENST00000471167 BRD7Q9NPI1 651 aa10.34□□□□□ -0.75
PRPF40A-206ENST00000471167 GDF2Q9UK05 429 aaPredicted RBP10.34□□□□□ -0.75
PRPF40A-206ENST00000471167 GOLGA6L1Q8N7Z2 621 aa10.33□□□□□ -0.76
PRPF40A-206ENST00000471167 CEP63Q96MT8 703 aa10.33□□□□□ -0.76
PRPF40A-206ENST00000471167 SAP130Q9H0E3 1048 aa10.33□□□□□ -0.76
PRPF40A-206ENST00000471167 TIMELESSQ9UNS1 1208 aa10.33□□□□□ -0.76
PRPF40A-206ENST00000471167 COX20Q5RI15 118 aa10.32□□□□□ -0.76
PRPF40A-206ENST00000471167 MYO19Q96H55 970 aa10.32□□□□□ -0.76
PRPF40A-206ENST00000471167 NEUROD4Q9HD90 331 aa10.32□□□□□ -0.76
PRPF40A-206ENST00000471167 ANKIB1Q9P2G1 1089 aa10.32□□□□□ -0.76
PRPF40A-206ENST00000471167 DGKZQ13574 1117 aa10.31□□□□□ -0.76
PRPF40A-206ENST00000471167 CLP1Q92989 425 aaKnown RBP10.31□□□□□ -0.76
PRPF40A-206ENST00000471167 BTBD6Q96KE9 485 aa10.31□□□□□ -0.76
PRPF40A-206ENST00000471167 CXXC1Q9P0U4 656 aaPredicted RBP10.31□□□□□ -0.76
PRPF40A-206ENST00000471167 TMEM88BA6NKF7 163 aa10.3□□□□□ -0.76
PRPF40A-206ENST00000471167 TGFBR3LH3BV60 316 aa10.3□□□□□ -0.76
PRPF40A-206ENST00000471167 IER5Q5VY09 327 aa10.3□□□□□ -0.76
PRPF40A-206ENST00000471167 RAB44Q7Z6P3 723 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-206ENST00000471167 SYT9Q86SS6 491 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms